data_3FS6 # _model_server_result.job_id LolT4bppc3EpnfPEMSQifw _model_server_result.datetime_utc '2024-11-22 23:31:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fs6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":188}' # _entry.id 3FS6 # _exptl.entry_id 3FS6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3FS6 _cell.length_a 84.098 _cell.length_b 84.098 _cell.length_c 78.054 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FS6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 285 n n PA O2A NDP sing 286 n n PA O5B NDP sing 287 n n PA O3 NDP sing 288 n n O2A HOA2 NDP sing 289 n n O5B C5B NDP sing 290 n n C5B C4B NDP sing 291 n n C5B H51A NDP sing 292 n n C5B H52A NDP sing 293 n n C4B O4B NDP sing 294 n n C4B C3B NDP sing 295 n n C4B H4B NDP sing 296 n n O4B C1B NDP sing 297 n n C3B O3B NDP sing 298 n n C3B C2B NDP sing 299 n n C3B H3B NDP sing 300 n n O3B HO3A NDP sing 301 n n C2B O2B NDP sing 302 n n C2B C1B NDP sing 303 n n C2B H2B NDP sing 304 n n O2B P2B NDP sing 305 n n C1B N9A NDP sing 306 n n C1B H1B NDP sing 307 n n N9A C8A NDP sing 308 n y N9A C4A NDP sing 309 n y C8A N7A NDP doub 310 n y C8A H8A NDP sing 311 n n N7A C5A NDP sing 312 n y C5A C6A NDP sing 313 n y C5A C4A NDP doub 314 n y C6A N6A NDP sing 315 n n C6A N1A NDP doub 316 n y N6A H61A NDP sing 317 n n N6A H62A NDP sing 318 n n N1A C2A NDP sing 319 n y C2A N3A NDP doub 320 n y C2A H2A NDP sing 321 n n N3A C4A NDP sing 322 n y O3 PN NDP sing 323 n n PN O1N NDP doub 324 n n PN O2N NDP sing 325 n n PN O5D NDP sing 326 n n O2N H21N NDP sing 327 n n O5D C5D NDP sing 328 n n C5D C4D NDP sing 329 n n C5D H51N NDP sing 330 n n C5D H52N NDP sing 331 n n C4D O4D NDP sing 332 n n C4D C3D NDP sing 333 n n C4D H4D NDP sing 334 n n O4D C1D NDP sing 335 n n C3D O3D NDP sing 336 n n C3D C2D NDP sing 337 n n C3D H3D NDP sing 338 n n O3D HO3N NDP sing 339 n n C2D O2D NDP sing 340 n n C2D C1D NDP sing 341 n n C2D H2D NDP sing 342 n n O2D HO2N NDP sing 343 n n C1D N1N NDP sing 344 n n C1D H1D NDP sing 345 n n N1N C2N NDP sing 346 n n N1N C6N NDP sing 347 n n C2N C3N NDP doub 348 n n C2N H2N NDP sing 349 n n C3N C7N NDP sing 350 n n C3N C4N NDP sing 351 n n C7N O7N NDP doub 352 n n C7N N7N NDP sing 353 n n N7N H71N NDP sing 354 n n N7N H72N NDP sing 355 n n C4N C5N NDP sing 356 n n C4N H41N NDP sing 357 n n C4N H42N NDP sing 358 n n C5N C6N NDP doub 359 n n C5N H5N NDP sing 360 n n C6N H6N NDP sing 361 n n P2B O1X NDP doub 362 n n P2B O2X NDP sing 363 n n P2B O3X NDP sing 364 n n O2X HOP2 NDP sing 365 n n O3X HOP3 NDP sing 366 n n # _atom_sites.entry_id 3FS6 _atom_sites.fract_transf_matrix[1][1] 0.011891 _atom_sites.fract_transf_matrix[1][2] 0.006865 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DH1 A 1 187 187 DH1 DH1 . C 3 NDP A 1 188 188 NDP NDP . D 4 HOH A 1 189 189 HOH HOH . D 4 HOH A 2 190 190 HOH HOH . D 4 HOH A 3 191 191 HOH HOH . D 4 HOH A 4 192 192 HOH HOH . D 4 HOH A 5 193 193 HOH HOH . D 4 HOH A 6 194 194 HOH HOH . D 4 HOH A 7 195 195 HOH HOH . D 4 HOH A 8 196 196 HOH HOH . D 4 HOH A 9 197 197 HOH HOH . D 4 HOH A 10 198 198 HOH HOH . D 4 HOH A 11 199 199 HOH HOH . D 4 HOH A 12 200 200 HOH HOH . D 4 HOH A 13 201 201 HOH HOH . D 4 HOH A 14 202 202 HOH HOH . D 4 HOH A 15 203 203 HOH HOH . D 4 HOH A 16 204 204 HOH HOH . D 4 HOH A 17 205 205 HOH HOH . D 4 HOH A 18 206 206 HOH HOH . D 4 HOH A 19 207 207 HOH HOH . D 4 HOH A 20 208 208 HOH HOH . D 4 HOH A 21 209 209 HOH HOH . D 4 HOH A 22 210 210 HOH HOH . D 4 HOH A 23 211 211 HOH HOH . D 4 HOH A 24 212 212 HOH HOH . D 4 HOH A 25 213 213 HOH HOH . D 4 HOH A 26 214 214 HOH HOH . D 4 HOH A 27 215 215 HOH HOH . D 4 HOH A 28 216 216 HOH HOH . D 4 HOH A 29 217 217 HOH HOH . D 4 HOH A 30 218 218 HOH HOH . D 4 HOH A 31 219 219 HOH HOH . D 4 HOH A 32 220 220 HOH HOH . D 4 HOH A 33 221 221 HOH HOH . D 4 HOH A 34 222 222 HOH HOH . D 4 HOH A 35 223 223 HOH HOH . D 4 HOH A 36 224 224 HOH HOH . D 4 HOH A 37 225 225 HOH HOH . D 4 HOH A 38 226 226 HOH HOH . D 4 HOH A 39 227 227 HOH HOH . D 4 HOH A 40 228 228 HOH HOH . D 4 HOH A 41 229 229 HOH HOH . D 4 HOH A 42 230 230 HOH HOH . D 4 HOH A 43 231 231 HOH HOH . D 4 HOH A 44 232 232 HOH HOH . D 4 HOH A 45 233 233 HOH HOH . D 4 HOH A 46 234 234 HOH HOH . D 4 HOH A 47 235 235 HOH HOH . D 4 HOH A 48 236 236 HOH HOH . D 4 HOH A 49 237 237 HOH HOH . D 4 HOH A 50 238 238 HOH HOH . D 4 HOH A 51 239 239 HOH HOH . D 4 HOH A 52 240 240 HOH HOH . D 4 HOH A 53 241 241 HOH HOH . D 4 HOH A 54 242 242 HOH HOH . D 4 HOH A 55 243 243 HOH HOH . D 4 HOH A 56 244 244 HOH HOH . D 4 HOH A 57 245 245 HOH HOH . D 4 HOH A 58 246 246 HOH HOH . D 4 HOH A 59 247 247 HOH HOH . D 4 HOH A 60 248 248 HOH HOH . D 4 HOH A 61 249 249 HOH HOH . D 4 HOH A 62 250 250 HOH HOH . D 4 HOH A 63 251 251 HOH HOH . D 4 HOH A 64 252 252 HOH HOH . D 4 HOH A 65 253 253 HOH HOH . D 4 HOH A 66 254 254 HOH HOH . D 4 HOH A 67 255 255 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 3 -5.991 22.445 10.211 1 13.94 ? PA NDP 188 A 1 HETATM 2 O O1A NDP . . . C 3 -5.088 21.462 9.62 1 14.6 ? O1A NDP 188 A 1 HETATM 3 O O2A NDP . . . C 3 -5.743 23.859 9.871 1 17.8 ? O2A NDP 188 A 1 HETATM 4 O O5B NDP . . . C 3 -5.929 22.196 11.769 1 15.92 ? O5B NDP 188 A 1 HETATM 5 C C5B NDP . . . C 3 -6.69 22.989 12.64 1 18.49 ? C5B NDP 188 A 1 HETATM 6 C C4B NDP . . . C 3 -5.966 22.822 13.908 1 20.58 ? C4B NDP 188 A 1 HETATM 7 O O4B NDP . . . C 3 -4.548 23.045 13.478 1 22.93 ? O4B NDP 188 A 1 HETATM 8 C C3B NDP . . . C 3 -6.219 23.859 14.964 1 21.3 ? C3B NDP 188 A 1 HETATM 9 O O3B NDP . . . C 3 -7.289 23.442 15.826 1 23.52 ? O3B NDP 188 A 1 HETATM 10 C C2B NDP . . . C 3 -4.885 23.539 15.578 1 22.58 ? C2B NDP 188 A 1 HETATM 11 O O2B NDP . . . C 3 -4.638 24.325 16.642 1 22.54 ? O2B NDP 188 A 1 HETATM 12 C C1B NDP . . . C 3 -3.926 23.892 14.44 1 22.49 ? C1B NDP 188 A 1 HETATM 13 N N9A NDP . . . C 3 -3.723 25.293 13.788 1 22.79 ? N9A NDP 188 A 1 HETATM 14 C C8A NDP . . . C 3 -4.267 25.709 12.629 1 22.5 ? C8A NDP 188 A 1 HETATM 15 N N7A NDP . . . C 3 -3.845 26.948 12.346 1 22.02 ? N7A NDP 188 A 1 HETATM 16 C C5A NDP . . . C 3 -3.003 27.332 13.3 1 22.22 ? C5A NDP 188 A 1 HETATM 17 C C6A NDP . . . C 3 -2.266 28.495 13.531 1 23.14 ? C6A NDP 188 A 1 HETATM 18 N N6A NDP . . . C 3 -2.315 29.529 12.689 1 23.52 ? N6A NDP 188 A 1 HETATM 19 N N1A NDP . . . C 3 -1.489 28.564 14.63 1 23.4 ? N1A NDP 188 A 1 HETATM 20 C C2A NDP . . . C 3 -1.424 27.548 15.485 1 22.87 ? C2A NDP 188 A 1 HETATM 21 N N3A NDP . . . C 3 -2.115 26.435 15.289 1 22.9 ? N3A NDP 188 A 1 HETATM 22 C C4A NDP . . . C 3 -2.918 26.284 14.215 1 22.96 ? C4A NDP 188 A 1 HETATM 23 O O3 NDP . . . C 3 -7.587 21.941 10.011 1 17.47 ? O3 NDP 188 A 1 HETATM 24 P PN NDP . . . C 3 -8.787 21.951 8.886 1 17.32 ? PN NDP 188 A 1 HETATM 25 O O1N NDP . . . C 3 -8.823 23.261 8.209 1 19.22 ? O1N NDP 188 A 1 HETATM 26 O O2N NDP . . . C 3 -10.005 21.449 9.57 1 20.35 ? O2N NDP 188 A 1 HETATM 27 O O5D NDP . . . C 3 -8.362 20.819 7.875 1 19.35 ? O5D NDP 188 A 1 HETATM 28 C C5D NDP . . . C 3 -9.418 19.85 7.74 1 23.04 ? C5D NDP 188 A 1 HETATM 29 C C4D NDP . . . C 3 -9.319 18.919 6.563 1 22.74 ? C4D NDP 188 A 1 HETATM 30 O O4D NDP . . . C 3 -8.854 19.63 5.419 1 21.78 ? O4D NDP 188 A 1 HETATM 31 C C3D NDP . . . C 3 -8.238 17.874 6.823 1 24.7 ? C3D NDP 188 A 1 HETATM 32 O O3D NDP . . . C 3 -8.783 16.766 7.537 1 28.07 ? O3D NDP 188 A 1 HETATM 33 C C2D NDP . . . C 3 -7.841 17.467 5.402 1 22.86 ? C2D NDP 188 A 1 HETATM 34 O O2D NDP . . . C 3 -8.414 16.221 4.986 1 23.09 ? O2D NDP 188 A 1 HETATM 35 C C1D NDP . . . C 3 -8.412 18.59 4.529 1 20.54 ? C1D NDP 188 A 1 HETATM 36 N N1N NDP . . . C 3 -7.322 19.133 3.71 1 18.91 ? N1N NDP 188 A 1 HETATM 37 C C2N NDP . . . C 3 -7.482 19.103 2.33 1 18.79 ? C2N NDP 188 A 1 HETATM 38 C C3N NDP . . . C 3 -6.486 19.609 1.518 1 17.88 ? C3N NDP 188 A 1 HETATM 39 C C7N NDP . . . C 3 -6.674 19.581 -0.001 1 18.8 ? C7N NDP 188 A 1 HETATM 40 O O7N NDP . . . C 3 -5.783 19.985 -0.736 1 16.11 ? O7N NDP 188 A 1 HETATM 41 N N7N NDP . . . C 3 -7.846 19.105 -0.446 1 18.19 ? N7N NDP 188 A 1 HETATM 42 C C4N NDP . . . C 3 -5.328 20.147 2.102 1 18.03 ? C4N NDP 188 A 1 HETATM 43 C C5N NDP . . . C 3 -5.159 20.168 3.492 1 18.53 ? C5N NDP 188 A 1 HETATM 44 C C6N NDP . . . C 3 -6.157 19.661 4.312 1 18.3 ? C6N NDP 188 A 1 HETATM 45 P P2B NDP . . . C 3 -4.66 23.725 18.103 1 14.42 ? P2B NDP 188 A 1 HETATM 46 O O1X NDP . . . C 3 -3.948 22.285 18.304 1 17.99 ? O1X NDP 188 A 1 HETATM 47 O O2X NDP . . . C 3 -6.218 23.692 18.532 1 17.39 ? O2X NDP 188 A 1 HETATM 48 O O3X NDP . . . C 3 -3.95 24.807 18.805 1 17.02 ? O3X NDP 188 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #