data_3FSD
#
_model_server_result.job_id            12h_GGzmCpZOsGfB2LW2nw 
_model_server_result.datetime_utc      '2024-11-13 12:08:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3fsd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":135}' 
#
_entry.id    3FSD 
#
_exptl.entry_id    3FSD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3FSD 
_cell.length_a            61.018 
_cell.length_b            61.018 
_cell.length_c            56.442 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3FSD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 26 A ALA 25 1_555 A N MSE 27 A MSE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C MSE 27 A MSE 26 1_555 A N LEU 28 A LEU 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3FSD 
_atom_sites.fract_transf_matrix[1][1]    0.016389 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016389 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017717 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UNL A 1 134 1 UNL UNL . 
C 3 EDO A 1 135 2 EDO EDO . 
D 3 EDO A 1 136 3 EDO EDO . 
E 4 HOH A 1 137 4 HOH HOH . 
E 4 HOH A 2 138 5 HOH HOH . 
E 4 HOH A 3 139 6 HOH HOH . 
E 4 HOH A 4 140 7 HOH HOH . 
E 4 HOH A 5 141 8 HOH HOH . 
E 4 HOH A 6 142 9 HOH HOH . 
E 4 HOH A 7 143 10 HOH HOH . 
E 4 HOH A 8 144 11 HOH HOH . 
E 4 HOH A 9 145 12 HOH HOH . 
E 4 HOH A 10 146 13 HOH HOH . 
E 4 HOH A 11 147 14 HOH HOH . 
E 4 HOH A 12 148 15 HOH HOH . 
E 4 HOH A 13 149 16 HOH HOH . 
E 4 HOH A 14 150 17 HOH HOH . 
E 4 HOH A 15 151 18 HOH HOH . 
E 4 HOH A 16 152 19 HOH HOH . 
E 4 HOH A 17 153 20 HOH HOH . 
E 4 HOH A 18 154 21 HOH HOH . 
E 4 HOH A 19 155 22 HOH HOH . 
E 4 HOH A 20 156 23 HOH HOH . 
E 4 HOH A 21 157 24 HOH HOH . 
E 4 HOH A 22 158 25 HOH HOH . 
E 4 HOH A 23 159 26 HOH HOH . 
E 4 HOH A 24 160 27 HOH HOH . 
E 4 HOH A 25 161 28 HOH HOH . 
E 4 HOH A 26 162 29 HOH HOH . 
E 4 HOH A 27 163 30 HOH HOH . 
E 4 HOH A 28 164 31 HOH HOH . 
E 4 HOH A 29 165 32 HOH HOH . 
E 4 HOH A 30 166 33 HOH HOH . 
E 4 HOH A 31 167 34 HOH HOH . 
E 4 HOH A 32 168 35 HOH HOH . 
E 4 HOH A 33 169 36 HOH HOH . 
E 4 HOH A 34 170 37 HOH HOH . 
E 4 HOH A 35 171 38 HOH HOH . 
E 4 HOH A 36 172 39 HOH HOH . 
E 4 HOH A 37 173 40 HOH HOH . 
E 4 HOH A 38 174 41 HOH HOH . 
E 4 HOH A 39 175 42 HOH HOH . 
E 4 HOH A 40 176 43 HOH HOH . 
E 4 HOH A 41 177 44 HOH HOH . 
E 4 HOH A 42 178 45 HOH HOH . 
E 4 HOH A 43 179 46 HOH HOH . 
E 4 HOH A 44 180 47 HOH HOH . 
E 4 HOH A 45 181 48 HOH HOH . 
E 4 HOH A 46 182 49 HOH HOH . 
E 4 HOH A 47 183 50 HOH HOH . 
E 4 HOH A 48 184 51 HOH HOH . 
E 4 HOH A 49 185 52 HOH HOH . 
E 4 HOH A 50 186 53 HOH HOH . 
E 4 HOH A 51 187 54 HOH HOH . 
E 4 HOH A 52 188 55 HOH HOH . 
E 4 HOH A 53 189 56 HOH HOH . 
E 4 HOH A 54 190 57 HOH HOH . 
E 4 HOH A 55 191 58 HOH HOH . 
E 4 HOH A 56 192 59 HOH HOH . 
E 4 HOH A 57 193 60 HOH HOH . 
E 4 HOH A 58 194 61 HOH HOH . 
E 4 HOH A 59 195 62 HOH HOH . 
E 4 HOH A 60 196 63 HOH HOH . 
E 4 HOH A 61 197 64 HOH HOH . 
E 4 HOH A 62 198 65 HOH HOH . 
E 4 HOH A 63 199 66 HOH HOH . 
E 4 HOH A 64 200 67 HOH HOH . 
E 4 HOH A 65 201 68 HOH HOH . 
E 4 HOH A 66 202 69 HOH HOH . 
E 4 HOH A 67 203 70 HOH HOH . 
E 4 HOH A 68 204 71 HOH HOH . 
E 4 HOH A 69 205 72 HOH HOH . 
E 4 HOH A 70 206 73 HOH HOH . 
E 4 HOH A 71 207 74 HOH HOH . 
E 4 HOH A 72 208 75 HOH HOH . 
E 4 HOH A 73 209 76 HOH HOH . 
E 4 HOH A 74 210 77 HOH HOH . 
E 4 HOH A 75 211 78 HOH HOH . 
E 4 HOH A 76 212 79 HOH HOH . 
E 4 HOH A 77 213 80 HOH HOH . 
E 4 HOH A 78 214 81 HOH HOH . 
E 4 HOH A 79 215 82 HOH HOH . 
E 4 HOH A 80 216 83 HOH HOH . 
E 4 HOH A 81 217 84 HOH HOH . 
E 4 HOH A 82 218 85 HOH HOH . 
E 4 HOH A 83 219 86 HOH HOH . 
E 4 HOH A 84 220 87 HOH HOH . 
E 4 HOH A 85 221 88 HOH HOH . 
E 4 HOH A 86 222 89 HOH HOH . 
E 4 HOH A 87 223 90 HOH HOH . 
E 4 HOH A 88 224 91 HOH HOH . 
E 4 HOH A 89 225 92 HOH HOH . 
E 4 HOH A 90 226 93 HOH HOH . 
E 4 HOH A 91 227 94 HOH HOH . 
E 4 HOH A 92 228 95 HOH HOH . 
E 4 HOH A 93 229 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 24.037 5.982 -4.848 1 44.34 ? C1 EDO 135 A 1 
HETATM 2 O O1 EDO . . . C 3 24.416 4.913 -3.975 1 36.66 ? O1 EDO 135 A 1 
HETATM 3 C C2 EDO . . . C 3 25.161 6.266 -5.83 1 43.69 ? C2 EDO 135 A 1 
HETATM 4 O O2 EDO . . . C 3 25.102 5.28 -6.867 1 47.33 ? O2 EDO 135 A 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           4 
#