data_3FT5 # _model_server_result.job_id Oeo7QzGH-RVwpCNFRgb7Ig _model_server_result.datetime_utc '2025-02-27 10:01:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ft5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":237}' # _entry.id 3FT5 # _exptl.entry_id 3FT5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 181.258 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methyl-7,8-dihydro-5H-thiopyrano[4,3-d]pyrimidin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FT5 _cell.length_a 65.083 _cell.length_b 89.009 _cell.length_c 99.715 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FT5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 65.083 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H11 N3 S' _chem_comp.formula_weight 181.258 _chem_comp.id MO8 _chem_comp.mon_nstd_flag . _chem_comp.name 4-methyl-7,8-dihydro-5H-thiopyrano[4,3-d]pyrimidin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N11 C9 MO8 sing 224 n n N11 HN11 MO8 sing 225 n n N11 HN1A MO8 sing 226 n n N10 C9 MO8 doub 227 n y C9 N8 MO8 sing 228 n y N8 C7 MO8 doub 229 n y C2 C7 MO8 sing 230 n y C7 C12 MO8 sing 231 n n C12 H12 MO8 sing 232 n n C12 H12A MO8 sing 233 n n C12 H12B MO8 sing 234 n n C3 C2 MO8 doub 235 n y C2 C1 MO8 sing 236 n n N10 C3 MO8 sing 237 n y C4 C3 MO8 sing 238 n n C5 C4 MO8 sing 239 n n C4 H4 MO8 sing 240 n n C4 H4A MO8 sing 241 n n C5 S6 MO8 sing 242 n n C5 H5 MO8 sing 243 n n C5 H5A MO8 sing 244 n n S6 C1 MO8 sing 245 n n C1 H1 MO8 sing 246 n n C1 H1A MO8 sing 247 n n # _atom_sites.entry_id 3FT5 _atom_sites.fract_transf_matrix[1][1] 0.015365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011235 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MO8 A 1 237 1 MO8 MOL . C 3 HOH A 1 238 1 HOH HOH . C 3 HOH A 2 239 2 HOH HOH . C 3 HOH A 3 240 3 HOH HOH . C 3 HOH A 4 241 4 HOH HOH . C 3 HOH A 5 242 5 HOH HOH . C 3 HOH A 6 243 6 HOH HOH . C 3 HOH A 7 244 7 HOH HOH . C 3 HOH A 8 245 8 HOH HOH . C 3 HOH A 9 246 9 HOH HOH . C 3 HOH A 10 247 10 HOH HOH . C 3 HOH A 11 248 11 HOH HOH . C 3 HOH A 12 249 12 HOH HOH . C 3 HOH A 13 250 13 HOH HOH . C 3 HOH A 14 251 14 HOH HOH . C 3 HOH A 15 252 15 HOH HOH . C 3 HOH A 16 253 16 HOH HOH . C 3 HOH A 17 254 17 HOH HOH . C 3 HOH A 18 255 18 HOH HOH . C 3 HOH A 19 256 19 HOH HOH . C 3 HOH A 20 257 20 HOH HOH . C 3 HOH A 21 258 21 HOH HOH . C 3 HOH A 22 259 22 HOH HOH . C 3 HOH A 23 260 23 HOH HOH . C 3 HOH A 24 261 24 HOH HOH . C 3 HOH A 25 262 25 HOH HOH . C 3 HOH A 26 263 26 HOH HOH . C 3 HOH A 27 264 27 HOH HOH . C 3 HOH A 28 265 28 HOH HOH . C 3 HOH A 29 266 29 HOH HOH . C 3 HOH A 30 267 30 HOH HOH . C 3 HOH A 31 268 31 HOH HOH . C 3 HOH A 32 269 32 HOH HOH . C 3 HOH A 33 270 33 HOH HOH . C 3 HOH A 34 271 34 HOH HOH . C 3 HOH A 35 272 35 HOH HOH . C 3 HOH A 36 273 36 HOH HOH . C 3 HOH A 37 274 37 HOH HOH . C 3 HOH A 38 275 38 HOH HOH . C 3 HOH A 39 276 39 HOH HOH . C 3 HOH A 40 277 40 HOH HOH . C 3 HOH A 41 278 41 HOH HOH . C 3 HOH A 42 279 42 HOH HOH . C 3 HOH A 43 280 43 HOH HOH . C 3 HOH A 44 281 44 HOH HOH . C 3 HOH A 45 282 45 HOH HOH . C 3 HOH A 46 283 46 HOH HOH . C 3 HOH A 47 284 47 HOH HOH . C 3 HOH A 48 285 48 HOH HOH . C 3 HOH A 49 286 49 HOH HOH . C 3 HOH A 50 287 50 HOH HOH . C 3 HOH A 51 288 51 HOH HOH . C 3 HOH A 52 289 52 HOH HOH . C 3 HOH A 53 290 53 HOH HOH . C 3 HOH A 54 291 54 HOH HOH . C 3 HOH A 55 292 55 HOH HOH . C 3 HOH A 56 293 56 HOH HOH . C 3 HOH A 57 294 57 HOH HOH . C 3 HOH A 58 295 58 HOH HOH . C 3 HOH A 59 296 59 HOH HOH . C 3 HOH A 60 297 60 HOH HOH . C 3 HOH A 61 298 61 HOH HOH . C 3 HOH A 62 299 62 HOH HOH . C 3 HOH A 63 300 63 HOH HOH . C 3 HOH A 64 301 64 HOH HOH . C 3 HOH A 65 302 65 HOH HOH . C 3 HOH A 66 303 66 HOH HOH . C 3 HOH A 67 304 67 HOH HOH . C 3 HOH A 68 305 68 HOH HOH . C 3 HOH A 69 306 69 HOH HOH . C 3 HOH A 70 307 70 HOH HOH . C 3 HOH A 71 308 71 HOH HOH . C 3 HOH A 72 309 72 HOH HOH . C 3 HOH A 73 310 73 HOH HOH . C 3 HOH A 74 311 74 HOH HOH . C 3 HOH A 75 312 75 HOH HOH . C 3 HOH A 76 313 76 HOH HOH . C 3 HOH A 77 314 77 HOH HOH . C 3 HOH A 78 315 78 HOH HOH . C 3 HOH A 79 316 79 HOH HOH . C 3 HOH A 80 317 80 HOH HOH . C 3 HOH A 81 318 81 HOH HOH . C 3 HOH A 82 319 82 HOH HOH . C 3 HOH A 83 320 83 HOH HOH . C 3 HOH A 84 321 84 HOH HOH . C 3 HOH A 85 322 85 HOH HOH . C 3 HOH A 86 323 86 HOH HOH . C 3 HOH A 87 324 87 HOH HOH . C 3 HOH A 88 325 88 HOH HOH . C 3 HOH A 89 326 89 HOH HOH . C 3 HOH A 90 327 90 HOH HOH . C 3 HOH A 91 328 91 HOH HOH . C 3 HOH A 92 329 92 HOH HOH . C 3 HOH A 93 330 93 HOH HOH . C 3 HOH A 94 331 94 HOH HOH . C 3 HOH A 95 332 95 HOH HOH . C 3 HOH A 96 333 96 HOH HOH . C 3 HOH A 97 334 97 HOH HOH . C 3 HOH A 98 335 98 HOH HOH . C 3 HOH A 99 336 99 HOH HOH . C 3 HOH A 100 337 100 HOH HOH . C 3 HOH A 101 338 101 HOH HOH . C 3 HOH A 102 339 102 HOH HOH . C 3 HOH A 103 340 104 HOH HOH . C 3 HOH A 104 341 105 HOH HOH . C 3 HOH A 105 342 106 HOH HOH . C 3 HOH A 106 343 107 HOH HOH . C 3 HOH A 107 344 108 HOH HOH . C 3 HOH A 108 345 109 HOH HOH . C 3 HOH A 109 346 110 HOH HOH . C 3 HOH A 110 347 111 HOH HOH . C 3 HOH A 111 348 112 HOH HOH . C 3 HOH A 112 349 113 HOH HOH . C 3 HOH A 113 350 114 HOH HOH . C 3 HOH A 114 351 115 HOH HOH . C 3 HOH A 115 352 116 HOH HOH . C 3 HOH A 116 353 117 HOH HOH . C 3 HOH A 117 354 118 HOH HOH . C 3 HOH A 118 355 119 HOH HOH . C 3 HOH A 119 356 120 HOH HOH . C 3 HOH A 120 357 121 HOH HOH . C 3 HOH A 121 358 122 HOH HOH . C 3 HOH A 122 359 123 HOH HOH . C 3 HOH A 123 360 124 HOH HOH . C 3 HOH A 124 361 125 HOH HOH . C 3 HOH A 125 362 126 HOH HOH . C 3 HOH A 126 363 127 HOH HOH . C 3 HOH A 127 364 128 HOH HOH . C 3 HOH A 128 365 129 HOH HOH . C 3 HOH A 129 366 130 HOH HOH . C 3 HOH A 130 367 131 HOH HOH . C 3 HOH A 131 368 132 HOH HOH . C 3 HOH A 132 369 133 HOH HOH . C 3 HOH A 133 370 134 HOH HOH . C 3 HOH A 134 371 135 HOH HOH . C 3 HOH A 135 372 136 HOH HOH . C 3 HOH A 136 373 137 HOH HOH . C 3 HOH A 137 374 138 HOH HOH . C 3 HOH A 138 375 139 HOH HOH . C 3 HOH A 139 376 140 HOH HOH . C 3 HOH A 140 377 141 HOH HOH . C 3 HOH A 141 378 142 HOH HOH . C 3 HOH A 142 379 143 HOH HOH . C 3 HOH A 143 380 144 HOH HOH . C 3 HOH A 144 381 145 HOH HOH . C 3 HOH A 145 382 146 HOH HOH . C 3 HOH A 146 383 147 HOH HOH . C 3 HOH A 147 384 148 HOH HOH . C 3 HOH A 148 385 149 HOH HOH . C 3 HOH A 149 386 150 HOH HOH . C 3 HOH A 150 387 151 HOH HOH . C 3 HOH A 151 388 152 HOH HOH . C 3 HOH A 152 389 153 HOH HOH . C 3 HOH A 153 390 154 HOH HOH . C 3 HOH A 154 391 155 HOH HOH . C 3 HOH A 155 392 156 HOH HOH . C 3 HOH A 156 393 157 HOH HOH . C 3 HOH A 157 394 158 HOH HOH . C 3 HOH A 158 395 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N11 MO8 . . . B 2 29.069 11.469 23.736 1 16.18 ? N11 MO8 237 A 1 HETATM 2 C C9 MO8 . . . B 2 30.137 10.879 24.318 1 19.63 ? C9 MO8 237 A 1 HETATM 3 N N8 MO8 . . . B 2 29.922 10.188 25.446 1 19.96 ? N8 MO8 237 A 1 HETATM 4 C C7 MO8 . . . B 2 30.893 9.542 26.113 1 20.72 ? C7 MO8 237 A 1 HETATM 5 C C12 MO8 . . . B 2 30.572 8.768 27.37 1 20.24 ? C12 MO8 237 A 1 HETATM 6 C C2 MO8 . . . B 2 32.257 9.64 25.574 1 20.68 ? C2 MO8 237 A 1 HETATM 7 N N10 MO8 . . . B 2 31.364 10.991 23.748 1 20.76 ? N10 MO8 237 A 1 HETATM 8 C C3 MO8 . . . B 2 32.445 10.413 24.342 1 22.58 ? C3 MO8 237 A 1 HETATM 9 C C4 MO8 . . . B 2 33.815 10.585 23.726 1 25.23 ? C4 MO8 237 A 1 HETATM 10 C C5 MO8 . . . B 2 34.567 9.284 23.528 1 30.92 ? C5 MO8 237 A 1 HETATM 11 S S6 MO8 . . . B 2 34.201 8.165 24.826 1 37.92 ? S6 MO8 237 A 1 HETATM 12 C C1 MO8 . . . B 2 33.429 8.957 26.213 1 27.74 ? C1 MO8 237 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #