data_3FT6 # _model_server_result.job_id kAa8OpCDwQPksxVi0CkdWQ _model_server_result.datetime_utc '2024-11-26 23:36:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ft6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":22}' # _entry.id 3FT6 # _exptl.entry_id 3FT6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.247 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROFLAVIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3FT6 _cell.length_a 24.563 _cell.length_b 24.563 _cell.length_c 78.276 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 3 A DA 3 1_555 B N3 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 3 A DA 3 1_555 B O4 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DT 4 A DT 4 1_555 B N1 DA 3 B DA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O4 DT 4 A DT 4 1_555 B N6 DA 3 B DA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N3 DC 5 A DC 5 1_555 B N1 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N4 DC 5 A DC 5 1_555 B O6 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O2 DC 5 A DC 5 1_555 B N2 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DG 6 A DG 6 1_555 B N3 DC 1 B DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N2 DG 6 A DG 6 1_555 B O2 DC 1 B DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O6 DG 6 A DG 6 1_555 B N4 DC 1 B DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C13 H11 N3' _chem_comp.formula_weight 209.247 _chem_comp.id PRL _chem_comp.mon_nstd_flag . _chem_comp.name PROFLAVIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PRL doub 176 n y C1 C13 PRL sing 177 n y C1 H1 PRL sing 178 n n C2 C3 PRL sing 179 n y C2 H2 PRL sing 180 n n C3 C4 PRL doub 181 n y C3 N15 PRL sing 182 n n C4 C11 PRL sing 183 n y C4 H4 PRL sing 184 n n C5 C6 PRL doub 185 n y C5 C14 PRL sing 186 n y C5 H5 PRL sing 187 n n C6 C7 PRL sing 188 n y C6 N16 PRL sing 189 n n C7 C8 PRL doub 190 n y C7 H7 PRL sing 191 n n C8 C12 PRL sing 192 n y C8 H8 PRL sing 193 n n C9 C12 PRL doub 194 n y C9 C13 PRL sing 195 n y C9 H9 PRL sing 196 n n N10 C11 PRL sing 197 n y N10 C14 PRL doub 198 n y C11 C13 PRL doub 199 n y C12 C14 PRL sing 200 n y N15 HNF1 PRL sing 201 n n N15 HNF2 PRL sing 202 n n N16 HNG1 PRL sing 203 n n N16 HNG2 PRL sing 204 n n # _atom_sites.entry_id 3FT6 _atom_sites.fract_transf_matrix[1][1] 0.040712 _atom_sites.fract_transf_matrix[1][2] 0.023505 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.04701 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PRL A 1 21 21 PRL PRL . D 3 NCO A 1 31 31 NCO NCO . E 3 NCO A 1 32 32 NCO NCO . F 2 PRL B 1 22 22 PRL PRL . G 3 NCO B 1 32 32 NCO NCO . H 4 HOH A 1 33 33 HOH HOH . H 4 HOH A 2 101 101 HOH HOH . H 4 HOH A 3 104 104 HOH HOH . H 4 HOH A 4 106 106 HOH HOH . H 4 HOH A 5 107 107 HOH HOH . H 4 HOH A 6 108 108 HOH HOH . H 4 HOH A 7 111 111 HOH HOH . H 4 HOH A 8 114 114 HOH HOH . H 4 HOH A 9 115 115 HOH HOH . H 4 HOH A 10 117 117 HOH HOH . H 4 HOH A 11 120 120 HOH HOH . H 4 HOH A 12 121 121 HOH HOH . H 4 HOH A 13 122 122 HOH HOH . H 4 HOH A 14 123 123 HOH HOH . H 4 HOH A 15 125 125 HOH HOH . H 4 HOH A 16 127 127 HOH HOH . H 4 HOH A 17 128 128 HOH HOH . H 4 HOH A 18 129 129 HOH HOH . H 4 HOH A 19 132 132 HOH HOH . I 4 HOH B 1 33 33 HOH HOH . I 4 HOH B 2 102 102 HOH HOH . I 4 HOH B 3 103 103 HOH HOH . I 4 HOH B 4 105 105 HOH HOH . I 4 HOH B 5 109 109 HOH HOH . I 4 HOH B 6 110 110 HOH HOH . I 4 HOH B 7 112 112 HOH HOH . I 4 HOH B 8 113 113 HOH HOH . I 4 HOH B 9 116 116 HOH HOH . I 4 HOH B 10 118 118 HOH HOH . I 4 HOH B 11 119 119 HOH HOH . I 4 HOH B 12 124 124 HOH HOH . I 4 HOH B 13 126 126 HOH HOH . I 4 HOH B 14 130 130 HOH HOH . I 4 HOH B 15 131 131 HOH HOH . I 4 HOH B 16 133 133 HOH HOH . I 4 HOH B 17 134 134 HOH HOH . I 4 HOH B 18 135 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PRL . . . F 2 5.573 13.58 29.278 1 15.66 ? C1 PRL 22 B 1 HETATM 2 C C2 PRL . . . F 2 5.772 14.739 28.535 1 14.23 ? C2 PRL 22 B 1 HETATM 3 C C3 PRL . . . F 2 4.685 15.418 27.936 1 14.86 ? C3 PRL 22 B 1 HETATM 4 C C4 PRL . . . F 2 3.386 14.939 28.061 1 15.4 ? C4 PRL 22 B 1 HETATM 5 C C5 PRL . . . F 2 0.372 11.599 29.753 1 15.81 ? C5 PRL 22 B 1 HETATM 6 C C6 PRL . . . F 2 0.11 10.412 30.464 1 15.99 ? C6 PRL 22 B 1 HETATM 7 C C7 PRL . . . F 2 1.171 9.734 31.088 1 16.2 ? C7 PRL 22 B 1 HETATM 8 C C8 PRL . . . F 2 2.472 10.204 30.977 1 14.91 ? C8 PRL 22 B 1 HETATM 9 C C9 PRL . . . F 2 4.066 11.885 30.146 1 15.03 ? C9 PRL 22 B 1 HETATM 10 N N10 PRL . . . F 2 1.928 13.252 28.929 1 15.54 ? N10 PRL 22 B 1 HETATM 11 C C11 PRL . . . F 2 3.158 13.774 28.789 1 14.9 ? C11 PRL 22 B 1 HETATM 12 C C12 PRL . . . F 2 2.772 11.378 30.274 1 16.36 ? C12 PRL 22 B 1 HETATM 13 C C13 PRL . . . F 2 4.297 13.057 29.433 1 15.5 ? C13 PRL 22 B 1 HETATM 14 C C14 PRL . . . F 2 1.666 12.111 29.623 1 14.7 ? C14 PRL 22 B 1 HETATM 15 N N15 PRL . . . F 2 4.891 16.544 27.237 1 15.52 ? N15 PRL 22 B 1 HETATM 16 N N16 PRL . . . F 2 -1.158 9.942 30.569 1 16.84 ? N16 PRL 22 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 471 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #