data_3FTQ # _model_server_result.job_id CxOL1EhdZ9oymEVuJDExIQ _model_server_result.datetime_utc '2025-08-30 23:35:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ftq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":372}' # _entry.id 3FTQ # _exptl.entry_id 3FTQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 522.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FTQ _cell.length_a 65.98 _cell.length_b 118.44 _cell.length_c 190.82 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FTQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA dimeric 2 software_defined_assembly 5 PISA dimeric 2 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 A,B,E,F,G,H,M,N 5 1 C,D,I,J,K,L,O,P 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 19 A SER 51 1_555 E MG MG . A MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc2 A OG1 THR 46 A THR 78 1_555 E MG MG . A MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc3 M O HOH . A HOH 320 1_555 E MG MG . A MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? metalc ? metalc4 M O HOH . A HOH 321 1_555 E MG MG . A MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc5 E MG MG . A MG 371 1_555 F O2B GNP . A GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? metalc ? metalc6 E MG MG . A MG 371 1_555 F O1G GNP . A GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc7 N O HOH . B HOH 6 1_555 G MG MG . B MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc8 N O HOH . B HOH 27 1_555 G MG MG . B MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc9 B OG SER 19 B SER 51 1_555 G MG MG . B MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc10 B OG1 THR 46 B THR 78 1_555 G MG MG . B MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc11 G MG MG . B MG 371 1_555 H O1G GNP . B GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc12 G MG MG . B MG 371 1_555 H O2B GNP . B GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc13 C OG SER 19 C SER 51 1_555 I MG MG . C MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc14 C OG1 THR 46 C THR 78 1_555 I MG MG . C MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc15 O O HOH . C HOH 315 1_555 I MG MG . C MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc16 O O HOH . C HOH 318 1_555 I MG MG . C MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc17 I MG MG . C MG 371 1_555 J O1G GNP . C GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc18 I MG MG . C MG 371 1_555 J O2B GNP . C GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc19 P O HOH . D HOH 5 1_555 K MG MG . D MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc20 D OG SER 19 D SER 51 1_555 K MG MG . D MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc21 D OG1 THR 46 D THR 78 1_555 K MG MG . D MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc22 P O HOH . D HOH 317 1_555 K MG MG . D MG 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc23 K MG MG . D MG 371 1_555 L O1G GNP . D GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc24 K MG MG . D MG 371 1_555 L O2B GNP . D GNP 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'C10 H17 N6 O13 P3' _chem_comp.formula_weight 522.196 _chem_comp.id GNP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G GNP doub 129 n n PG O2G GNP sing 130 n n PG O3G GNP sing 131 n n PG N3B GNP sing 132 n n O2G HOG2 GNP sing 133 n n O3G HOG3 GNP sing 134 n n N3B PB GNP sing 135 n n N3B HNB3 GNP sing 136 n n PB O1B GNP doub 137 n n PB O2B GNP sing 138 n n PB O3A GNP sing 139 n n O2B HOB2 GNP sing 140 n n O3A PA GNP sing 141 n n PA O1A GNP doub 142 n n PA O2A GNP sing 143 n n PA O5' GNP sing 144 n n O2A HOA2 GNP sing 145 n n O5' C5' GNP sing 146 n n C5' C4' GNP sing 147 n n C5' "H5'2" GNP sing 148 n n C5' "H5'1" GNP sing 149 n n C4' O4' GNP sing 150 n n C4' C3' GNP sing 151 n n C4' H4' GNP sing 152 n n O4' C1' GNP sing 153 n n C3' O3' GNP sing 154 n n C3' C2' GNP sing 155 n n C3' H3' GNP sing 156 n n O3' HO3' GNP sing 157 n n C2' O2' GNP sing 158 n n C2' C1' GNP sing 159 n n C2' H2' GNP sing 160 n n O2' HO2' GNP sing 161 n n C1' N9 GNP sing 162 n n C1' H1' GNP sing 163 n n N9 C8 GNP sing 164 n y N9 C4 GNP sing 165 n y C8 N7 GNP doub 166 n y C8 H8 GNP sing 167 n n N7 C5 GNP sing 168 n y C5 C6 GNP sing 169 n y C5 C4 GNP doub 170 n y C6 O6 GNP doub 171 n n C6 N1 GNP sing 172 n y N1 C2 GNP sing 173 n y N1 HN1 GNP sing 174 n n C2 N2 GNP sing 175 n n C2 N3 GNP doub 176 n y N2 HN21 GNP sing 177 n n N2 HN22 GNP sing 178 n n N3 C4 GNP sing 179 n y # _atom_sites.entry_id 3FTQ _atom_sites.fract_transf_matrix[1][1] 0.015156 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 371 371 MG MG . F 3 GNP A 1 372 372 GNP GNP . G 2 MG B 1 371 371 MG MG . H 3 GNP B 1 372 372 GNP GNP . I 2 MG C 1 371 371 MG MG . J 3 GNP C 1 372 372 GNP GNP . K 2 MG D 1 371 371 MG MG . L 3 GNP D 1 372 372 GNP GNP . M 4 HOH A 1 1 1 HOH HOH . M 4 HOH A 2 9 9 HOH HOH . M 4 HOH A 3 12 12 HOH HOH . M 4 HOH A 4 13 13 HOH HOH . M 4 HOH A 5 14 14 HOH HOH . M 4 HOH A 6 15 15 HOH HOH . M 4 HOH A 7 16 16 HOH HOH . M 4 HOH A 8 18 18 HOH HOH . M 4 HOH A 9 19 19 HOH HOH . M 4 HOH A 10 20 20 HOH HOH . M 4 HOH A 11 22 22 HOH HOH . M 4 HOH A 12 25 25 HOH HOH . M 4 HOH A 13 307 307 HOH HOH . M 4 HOH A 14 308 308 HOH HOH . M 4 HOH A 15 309 309 HOH HOH . M 4 HOH A 16 310 310 HOH HOH . M 4 HOH A 17 311 311 HOH HOH . M 4 HOH A 18 312 312 HOH HOH . M 4 HOH A 19 313 313 HOH HOH . M 4 HOH A 20 314 314 HOH HOH . M 4 HOH A 21 315 315 HOH HOH . M 4 HOH A 22 316 316 HOH HOH . M 4 HOH A 23 317 317 HOH HOH . M 4 HOH A 24 318 318 HOH HOH . M 4 HOH A 25 319 319 HOH HOH . M 4 HOH A 26 320 320 HOH HOH . M 4 HOH A 27 321 321 HOH HOH . M 4 HOH A 28 322 322 HOH HOH . M 4 HOH A 29 323 323 HOH HOH . M 4 HOH A 30 324 324 HOH HOH . M 4 HOH A 31 325 325 HOH HOH . M 4 HOH A 32 326 326 HOH HOH . M 4 HOH A 33 327 327 HOH HOH . N 4 HOH B 1 6 6 HOH HOH . N 4 HOH B 2 10 10 HOH HOH . N 4 HOH B 3 21 21 HOH HOH . N 4 HOH B 4 26 26 HOH HOH . N 4 HOH B 5 27 27 HOH HOH . N 4 HOH B 6 29 29 HOH HOH . N 4 HOH B 7 32 32 HOH HOH . N 4 HOH B 8 307 307 HOH HOH . N 4 HOH B 9 308 308 HOH HOH . N 4 HOH B 10 309 309 HOH HOH . N 4 HOH B 11 310 310 HOH HOH . N 4 HOH B 12 311 311 HOH HOH . N 4 HOH B 13 312 312 HOH HOH . N 4 HOH B 14 313 313 HOH HOH . N 4 HOH B 15 314 314 HOH HOH . N 4 HOH B 16 315 315 HOH HOH . N 4 HOH B 17 316 316 HOH HOH . N 4 HOH B 18 317 317 HOH HOH . N 4 HOH B 19 318 318 HOH HOH . N 4 HOH B 20 319 319 HOH HOH . N 4 HOH B 21 321 321 HOH HOH . N 4 HOH B 22 322 322 HOH HOH . N 4 HOH B 23 323 323 HOH HOH . N 4 HOH B 24 324 324 HOH HOH . N 4 HOH B 25 325 325 HOH HOH . N 4 HOH B 26 326 326 HOH HOH . N 4 HOH B 27 327 327 HOH HOH . N 4 HOH B 28 328 328 HOH HOH . N 4 HOH B 29 329 329 HOH HOH . N 4 HOH B 30 330 330 HOH HOH . N 4 HOH B 31 331 331 HOH HOH . O 4 HOH C 1 2 2 HOH HOH . O 4 HOH C 2 3 3 HOH HOH . O 4 HOH C 3 7 7 HOH HOH . O 4 HOH C 4 11 11 HOH HOH . O 4 HOH C 5 23 23 HOH HOH . O 4 HOH C 6 24 24 HOH HOH . O 4 HOH C 7 28 28 HOH HOH . O 4 HOH C 8 30 30 HOH HOH . O 4 HOH C 9 31 31 HOH HOH . O 4 HOH C 10 307 307 HOH HOH . O 4 HOH C 11 308 308 HOH HOH . O 4 HOH C 12 309 309 HOH HOH . O 4 HOH C 13 310 310 HOH HOH . O 4 HOH C 14 311 311 HOH HOH . O 4 HOH C 15 312 312 HOH HOH . O 4 HOH C 16 313 313 HOH HOH . O 4 HOH C 17 314 314 HOH HOH . O 4 HOH C 18 315 315 HOH HOH . O 4 HOH C 19 316 316 HOH HOH . O 4 HOH C 20 317 317 HOH HOH . O 4 HOH C 21 318 318 HOH HOH . O 4 HOH C 22 319 319 HOH HOH . O 4 HOH C 23 320 320 HOH HOH . P 4 HOH D 1 4 4 HOH HOH . P 4 HOH D 2 5 5 HOH HOH . P 4 HOH D 3 8 8 HOH HOH . P 4 HOH D 4 17 17 HOH HOH . P 4 HOH D 5 307 307 HOH HOH . P 4 HOH D 6 308 308 HOH HOH . P 4 HOH D 7 309 309 HOH HOH . P 4 HOH D 8 310 310 HOH HOH . P 4 HOH D 9 311 311 HOH HOH . P 4 HOH D 10 312 312 HOH HOH . P 4 HOH D 11 313 313 HOH HOH . P 4 HOH D 12 314 314 HOH HOH . P 4 HOH D 13 315 315 HOH HOH . P 4 HOH D 14 316 316 HOH HOH . P 4 HOH D 15 317 317 HOH HOH . P 4 HOH D 16 320 320 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GNP . . . F 3 34.459 14.39 3.435 1 29.86 ? PG GNP 372 A 1 HETATM 2 O O1G GNP . . . F 3 34.895 14.759 2.037 1 28.84 ? O1G GNP 372 A 1 HETATM 3 O O2G GNP . . . F 3 33.138 14.956 3.909 1 29.25 ? O2G GNP 372 A 1 HETATM 4 O O3G GNP . . . F 3 35.633 14.764 4.312 1 28.32 ? O3G GNP 372 A 1 HETATM 5 N N3B GNP . . . F 3 34.36 12.796 3.512 1 29.76 ? N3B GNP 372 A 1 HETATM 6 P PB GNP . . . F 3 33.197 11.897 2.892 1 29.72 ? PB GNP 372 A 1 HETATM 7 O O1B GNP . . . F 3 31.979 11.985 3.746 1 27.96 ? O1B GNP 372 A 1 HETATM 8 O O2B GNP . . . F 3 33.03 12.32 1.482 1 29.39 ? O2B GNP 372 A 1 HETATM 9 O O3A GNP . . . F 3 33.708 10.44 2.916 1 29.01 ? O3A GNP 372 A 1 HETATM 10 P PA GNP . . . F 3 34.397 9.714 1.745 1 28.08 ? PA GNP 372 A 1 HETATM 11 O O1A GNP . . . F 3 33.37 9.336 0.747 1 27.03 ? O1A GNP 372 A 1 HETATM 12 O O2A GNP . . . F 3 35.577 10.46 1.273 1 28.04 ? O2A GNP 372 A 1 HETATM 13 O O5' GNP . . . F 3 34.954 8.353 2.291 1 28.56 ? O5' GNP 372 A 1 HETATM 14 C C5' GNP . . . F 3 35.924 8.281 3.336 1 28.61 ? C5' GNP 372 A 1 HETATM 15 C C4' GNP . . . F 3 36.388 6.847 3.426 1 28.65 ? C4' GNP 372 A 1 HETATM 16 O O4' GNP . . . F 3 35.35 6.024 4.022 1 28.92 ? O4' GNP 372 A 1 HETATM 17 C C3' GNP . . . F 3 36.585 6.238 2.049 1 29 ? C3' GNP 372 A 1 HETATM 18 O O3' GNP . . . F 3 37.895 6.526 1.661 1 29.08 ? O3' GNP 372 A 1 HETATM 19 C C2' GNP . . . F 3 36.354 4.748 2.26 1 28.45 ? C2' GNP 372 A 1 HETATM 20 O O2' GNP . . . F 3 37.575 4.099 2.534 1 29.32 ? O2' GNP 372 A 1 HETATM 21 C C1' GNP . . . F 3 35.456 4.706 3.502 1 28.17 ? C1' GNP 372 A 1 HETATM 22 N N9 GNP . . . F 3 34.108 4.274 3.206 1 28.04 ? N9 GNP 372 A 1 HETATM 23 C C8 GNP . . . F 3 33.336 4.734 2.162 1 28.76 ? C8 GNP 372 A 1 HETATM 24 N N7 GNP . . . F 3 32.147 4.2 2.101 1 28.19 ? N7 GNP 372 A 1 HETATM 25 C C5 GNP . . . F 3 32.14 3.339 3.179 1 27.07 ? C5 GNP 372 A 1 HETATM 26 C C6 GNP . . . F 3 31.107 2.511 3.607 1 27.04 ? C6 GNP 372 A 1 HETATM 27 O O6 GNP . . . F 3 30.002 2.378 3.094 1 27.54 ? O6 GNP 372 A 1 HETATM 28 N N1 GNP . . . F 3 31.451 1.791 4.74 1 28.59 ? N1 GNP 372 A 1 HETATM 29 C C2 GNP . . . F 3 32.653 1.87 5.385 1 28.06 ? C2 GNP 372 A 1 HETATM 30 N N2 GNP . . . F 3 32.752 1.086 6.46 1 27.94 ? N2 GNP 372 A 1 HETATM 31 N N3 GNP . . . F 3 33.653 2.659 4.998 1 27.8 ? N3 GNP 372 A 1 HETATM 32 C C4 GNP . . . F 3 33.325 3.366 3.883 1 27.69 ? C4 GNP 372 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 386 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 32 #