data_3FTW # _model_server_result.job_id m-gYI35opsmZiMAHct_Amw _model_server_result.datetime_utc '2024-11-25 13:06:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ftw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 3FTW # _exptl.entry_id 3FTW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 173.04 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'YTTERBIUM (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FTW _cell.length_a 78.311 _cell.length_b 86.952 _cell.length_c 99.528 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FTW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 48 A ASP 47 1_555 C YB YB . A YB 702 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc2 A OD2 ASP 48 A ASP 47 1_555 C YB YB . A YB 702 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc3 A NE2 HIS 296 A HIS 295 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc4 A NE2 HIS 300 A HIS 299 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc5 A OE1 GLU 319 A GLU 318 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc6 A OD1 ASP 482 A ASP 481 1_555 C YB YB . A YB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc7 A OD2 ASP 482 A ASP 481 1_555 C YB YB . A YB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc8 I O HOH . A HOH 628 1_555 C YB YB . A YB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc9 B ZN ZN . A ZN 701 1_555 E OXT ACT . A ACT 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc10 C YB YB . A YB 702 1_555 F OXT ACT . A ACT 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc11 C YB YB . A YB 702 1_555 F O ACT . A ACT 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc12 C YB YB . A YB 702 1_555 I O HOH . A HOH 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc13 C YB YB . A YB 702 1_555 I O HOH . A HOH 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? # _chem_comp.formula 'Yb 3' _chem_comp.formula_weight 173.04 _chem_comp.id YB _chem_comp.mon_nstd_flag . _chem_comp.name 'YTTERBIUM (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3FTW _atom_sites.fract_transf_matrix[1][1] 0.01277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 701 1003 ZN ZN . C 3 YB A 1 702 1005 YB YB . D 4 11X A 1 710 1 11X 11X . E 5 ACT A 1 801 1004 ACT ACT . F 5 ACT A 1 802 1006 ACT ACT . G 6 IMD A 1 803 1001 IMD IMD . H 6 IMD A 1 804 1002 IMD IMD . I 7 HOH A 1 612 612 HOH HOH . I 7 HOH A 2 613 613 HOH HOH . I 7 HOH A 3 614 614 HOH HOH . I 7 HOH A 4 615 615 HOH HOH . I 7 HOH A 5 616 701 HOH HOH . I 7 HOH A 6 617 617 HOH HOH . I 7 HOH A 7 618 618 HOH HOH . I 7 HOH A 8 619 619 HOH HOH . I 7 HOH A 9 620 620 HOH HOH . I 7 HOH A 10 621 621 HOH HOH . I 7 HOH A 11 622 622 HOH HOH . I 7 HOH A 12 623 623 HOH HOH . I 7 HOH A 13 624 624 HOH HOH . I 7 HOH A 14 625 625 HOH HOH . I 7 HOH A 15 626 626 HOH HOH . I 7 HOH A 16 627 627 HOH HOH . I 7 HOH A 17 628 628 HOH HOH . I 7 HOH A 18 629 629 HOH HOH . I 7 HOH A 19 630 630 HOH HOH . I 7 HOH A 20 631 631 HOH HOH . I 7 HOH A 21 632 632 HOH HOH . I 7 HOH A 22 633 633 HOH HOH . I 7 HOH A 23 634 634 HOH HOH . I 7 HOH A 24 635 635 HOH HOH . I 7 HOH A 25 636 636 HOH HOH . I 7 HOH A 26 637 637 HOH HOH . I 7 HOH A 27 638 638 HOH HOH . I 7 HOH A 28 639 639 HOH HOH . I 7 HOH A 29 640 640 HOH HOH . I 7 HOH A 30 641 641 HOH HOH . I 7 HOH A 31 642 642 HOH HOH . I 7 HOH A 32 643 643 HOH HOH . I 7 HOH A 33 644 644 HOH HOH . I 7 HOH A 34 645 645 HOH HOH . I 7 HOH A 35 646 646 HOH HOH . I 7 HOH A 36 647 647 HOH HOH . I 7 HOH A 37 648 648 HOH HOH . I 7 HOH A 38 649 649 HOH HOH . I 7 HOH A 39 650 650 HOH HOH . I 7 HOH A 40 651 651 HOH HOH . I 7 HOH A 41 652 652 HOH HOH . I 7 HOH A 42 653 653 HOH HOH . I 7 HOH A 43 654 654 HOH HOH . I 7 HOH A 44 655 655 HOH HOH . I 7 HOH A 45 656 656 HOH HOH . I 7 HOH A 46 657 657 HOH HOH . I 7 HOH A 47 658 658 HOH HOH . I 7 HOH A 48 659 659 HOH HOH . I 7 HOH A 49 660 660 HOH HOH . I 7 HOH A 50 661 661 HOH HOH . I 7 HOH A 51 662 662 HOH HOH . I 7 HOH A 52 663 663 HOH HOH . I 7 HOH A 53 664 664 HOH HOH . I 7 HOH A 54 665 665 HOH HOH . I 7 HOH A 55 666 666 HOH HOH . I 7 HOH A 56 667 667 HOH HOH . I 7 HOH A 57 668 668 HOH HOH . I 7 HOH A 58 669 669 HOH HOH . I 7 HOH A 59 670 670 HOH HOH . I 7 HOH A 60 671 671 HOH HOH . I 7 HOH A 61 672 672 HOH HOH . I 7 HOH A 62 673 673 HOH HOH . I 7 HOH A 63 674 674 HOH HOH . I 7 HOH A 64 675 675 HOH HOH . I 7 HOH A 65 676 676 HOH HOH . I 7 HOH A 66 677 677 HOH HOH . I 7 HOH A 67 678 678 HOH HOH . I 7 HOH A 68 679 679 HOH HOH . I 7 HOH A 69 680 680 HOH HOH . I 7 HOH A 70 681 681 HOH HOH . I 7 HOH A 71 682 682 HOH HOH . I 7 HOH A 72 683 683 HOH HOH . I 7 HOH A 73 684 684 HOH HOH . I 7 HOH A 74 685 685 HOH HOH . I 7 HOH A 75 686 686 HOH HOH . I 7 HOH A 76 687 687 HOH HOH . I 7 HOH A 77 688 688 HOH HOH . I 7 HOH A 78 689 689 HOH HOH . I 7 HOH A 79 690 690 HOH HOH . I 7 HOH A 80 691 691 HOH HOH . I 7 HOH A 81 692 692 HOH HOH . I 7 HOH A 82 693 693 HOH HOH . I 7 HOH A 83 694 694 HOH HOH . I 7 HOH A 84 695 695 HOH HOH . I 7 HOH A 85 696 696 HOH HOH . I 7 HOH A 86 697 697 HOH HOH . I 7 HOH A 87 698 698 HOH HOH . I 7 HOH A 88 699 699 HOH HOH . I 7 HOH A 89 700 700 HOH HOH . I 7 HOH A 90 703 703 HOH HOH . I 7 HOH A 91 704 704 HOH HOH . I 7 HOH A 92 705 705 HOH HOH . I 7 HOH A 93 706 706 HOH HOH . I 7 HOH A 94 707 707 HOH HOH . I 7 HOH A 95 708 708 HOH HOH . I 7 HOH A 96 709 709 HOH HOH . I 7 HOH A 97 711 711 HOH HOH . I 7 HOH A 98 712 712 HOH HOH . I 7 HOH A 99 713 713 HOH HOH . I 7 HOH A 100 714 714 HOH HOH . I 7 HOH A 101 715 715 HOH HOH . I 7 HOH A 102 716 716 HOH HOH . I 7 HOH A 103 717 717 HOH HOH . I 7 HOH A 104 718 718 HOH HOH . I 7 HOH A 105 719 719 HOH HOH . I 7 HOH A 106 720 720 HOH HOH . I 7 HOH A 107 721 721 HOH HOH . I 7 HOH A 108 722 722 HOH HOH . I 7 HOH A 109 723 723 HOH HOH . I 7 HOH A 110 724 724 HOH HOH . I 7 HOH A 111 725 725 HOH HOH . I 7 HOH A 112 726 726 HOH HOH . I 7 HOH A 113 727 727 HOH HOH . I 7 HOH A 114 728 728 HOH HOH . I 7 HOH A 115 729 729 HOH HOH . I 7 HOH A 116 730 730 HOH HOH . I 7 HOH A 117 731 731 HOH HOH . I 7 HOH A 118 732 732 HOH HOH . I 7 HOH A 119 733 733 HOH HOH . I 7 HOH A 120 734 734 HOH HOH . I 7 HOH A 121 735 735 HOH HOH . I 7 HOH A 122 736 736 HOH HOH . I 7 HOH A 123 737 737 HOH HOH . I 7 HOH A 124 738 738 HOH HOH . I 7 HOH A 125 739 739 HOH HOH . I 7 HOH A 126 740 740 HOH HOH . I 7 HOH A 127 741 741 HOH HOH . I 7 HOH A 128 742 742 HOH HOH . I 7 HOH A 129 743 743 HOH HOH . I 7 HOH A 130 744 744 HOH HOH . I 7 HOH A 131 745 745 HOH HOH . I 7 HOH A 132 746 746 HOH HOH . I 7 HOH A 133 747 747 HOH HOH . I 7 HOH A 134 748 748 HOH HOH . I 7 HOH A 135 749 749 HOH HOH . I 7 HOH A 136 750 750 HOH HOH . I 7 HOH A 137 751 751 HOH HOH . I 7 HOH A 138 752 752 HOH HOH . I 7 HOH A 139 753 753 HOH HOH . I 7 HOH A 140 754 754 HOH HOH . I 7 HOH A 141 755 755 HOH HOH . I 7 HOH A 142 756 756 HOH HOH . I 7 HOH A 143 757 757 HOH HOH . I 7 HOH A 144 758 758 HOH HOH . I 7 HOH A 145 759 759 HOH HOH . I 7 HOH A 146 760 760 HOH HOH . I 7 HOH A 147 761 761 HOH HOH . I 7 HOH A 148 762 762 HOH HOH . I 7 HOH A 149 763 763 HOH HOH . I 7 HOH A 150 764 764 HOH HOH . I 7 HOH A 151 765 765 HOH HOH . I 7 HOH A 152 766 766 HOH HOH . I 7 HOH A 153 767 767 HOH HOH . I 7 HOH A 154 768 768 HOH HOH . I 7 HOH A 155 769 769 HOH HOH . I 7 HOH A 156 770 770 HOH HOH . I 7 HOH A 157 771 771 HOH HOH . I 7 HOH A 158 772 772 HOH HOH . I 7 HOH A 159 773 773 HOH HOH . I 7 HOH A 160 774 774 HOH HOH . I 7 HOH A 161 775 775 HOH HOH . I 7 HOH A 162 776 776 HOH HOH . I 7 HOH A 163 777 777 HOH HOH . I 7 HOH A 164 778 778 HOH HOH . I 7 HOH A 165 779 779 HOH HOH . I 7 HOH A 166 780 780 HOH HOH . I 7 HOH A 167 781 781 HOH HOH . I 7 HOH A 168 782 782 HOH HOH . I 7 HOH A 169 783 783 HOH HOH . I 7 HOH A 170 784 784 HOH HOH . I 7 HOH A 171 785 785 HOH HOH . I 7 HOH A 172 786 786 HOH HOH . I 7 HOH A 173 787 787 HOH HOH . I 7 HOH A 174 788 788 HOH HOH . I 7 HOH A 175 789 789 HOH HOH . I 7 HOH A 176 790 790 HOH HOH . I 7 HOH A 177 791 791 HOH HOH . I 7 HOH A 178 792 792 HOH HOH . I 7 HOH A 179 793 793 HOH HOH . I 7 HOH A 180 794 794 HOH HOH . I 7 HOH A 181 795 795 HOH HOH . I 7 HOH A 182 796 796 HOH HOH . I 7 HOH A 183 797 797 HOH HOH . I 7 HOH A 184 798 798 HOH HOH . I 7 HOH A 185 799 799 HOH HOH . I 7 HOH A 186 800 800 HOH HOH . I 7 HOH A 187 805 805 HOH HOH . I 7 HOH A 188 806 806 HOH HOH . I 7 HOH A 189 807 807 HOH HOH . I 7 HOH A 190 808 808 HOH HOH . I 7 HOH A 191 809 809 HOH HOH . I 7 HOH A 192 810 810 HOH HOH . I 7 HOH A 193 811 811 HOH HOH . I 7 HOH A 194 812 812 HOH HOH . I 7 HOH A 195 813 813 HOH HOH . I 7 HOH A 196 814 814 HOH HOH . I 7 HOH A 197 815 815 HOH HOH . I 7 HOH A 198 816 816 HOH HOH . I 7 HOH A 199 817 817 HOH HOH . I 7 HOH A 200 818 818 HOH HOH . I 7 HOH A 201 819 819 HOH HOH . I 7 HOH A 202 820 820 HOH HOH . I 7 HOH A 203 821 821 HOH HOH . I 7 HOH A 204 822 822 HOH HOH . I 7 HOH A 205 823 823 HOH HOH . I 7 HOH A 206 824 824 HOH HOH . I 7 HOH A 207 825 825 HOH HOH . I 7 HOH A 208 826 826 HOH HOH . I 7 HOH A 209 827 827 HOH HOH . I 7 HOH A 210 828 828 HOH HOH . I 7 HOH A 211 829 829 HOH HOH . I 7 HOH A 212 830 830 HOH HOH . I 7 HOH A 213 831 831 HOH HOH . I 7 HOH A 214 832 832 HOH HOH . I 7 HOH A 215 833 833 HOH HOH . I 7 HOH A 216 834 702 HOH HOH . I 7 HOH A 217 835 710 HOH HOH . I 7 HOH A 218 836 801 HOH HOH . I 7 HOH A 219 837 802 HOH HOH . I 7 HOH A 220 838 803 HOH HOH . I 7 HOH A 221 839 804 HOH HOH . I 7 HOH A 222 841 841 HOH HOH . I 7 HOH A 223 842 842 HOH HOH . I 7 HOH A 224 843 843 HOH HOH . I 7 HOH A 225 844 844 HOH HOH . I 7 HOH A 226 845 845 HOH HOH . I 7 HOH A 227 846 846 HOH HOH . I 7 HOH A 228 847 847 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol YB _atom_site.label_atom_id YB _atom_site.label_comp_id YB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.198 _atom_site.Cartn_y -48.92 _atom_site.Cartn_z 6.051 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id YB _atom_site.auth_comp_id YB _atom_site.auth_seq_id 702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #