data_3FXR # _model_server_result.job_id Jjgrpj9GfUZfJzsHlsJxpw _model_server_result.datetime_utc '2025-04-06 04:18:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2001}' # _entry.id 3FXR # _exptl.entry_id 3FXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.52 _cell.angle_gamma 90 _cell.entry_id 3FXR _cell.length_a 135.11 _cell.length_b 51.83 _cell.length_c 107.99 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -37.854201 0 101.138022 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 O N N ? 3 P N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 149 n n C1 C2 GOL sing 150 n n C1 H11 GOL sing 151 n n C1 H12 GOL sing 152 n n O1 HO1 GOL sing 153 n n C2 O2 GOL sing 154 n n C2 C3 GOL sing 155 n n C2 H2 GOL sing 156 n n O2 HO2 GOL sing 157 n n C3 O3 GOL sing 158 n n C3 H31 GOL sing 159 n n C3 H32 GOL sing 160 n n O3 HO3 GOL sing 161 n n # _atom_sites.entry_id 3FXR _atom_sites.fract_transf_matrix[1][1] 0.007401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002771 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019294 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1002 1002 SO4 SO4 . D 2 SO4 A 1 1003 1003 SO4 SO4 . E 2 SO4 A 1 1004 1004 SO4 SO4 . F 2 SO4 A 1 1006 1006 SO4 SO4 . G 2 SO4 A 1 1008 1008 SO4 SO4 . H 2 SO4 A 1 1009 1009 SO4 SO4 . I 2 SO4 A 1 1010 1010 SO4 SO4 . J 3 GOL A 1 2001 2001 GOL GOL . K 4 ASC A 1 3001 3001 ASC ASC . L 2 SO4 B 1 1001 1001 SO4 SO4 . M 2 SO4 B 1 1005 1005 SO4 SO4 . N 2 SO4 B 1 1007 1007 SO4 SO4 . O 3 GOL B 1 2002 2002 GOL GOL . P 3 GOL B 1 2003 2003 GOL GOL . Q 5 HOH A 1 307 75 HOH HOH . Q 5 HOH A 2 309 77 HOH HOH . Q 5 HOH A 3 310 5 HOH HOH . Q 5 HOH A 4 311 6 HOH HOH . Q 5 HOH A 5 312 80 HOH HOH . Q 5 HOH A 6 313 8 HOH HOH . Q 5 HOH A 7 314 9 HOH HOH . Q 5 HOH A 8 315 79 HOH HOH . Q 5 HOH A 9 316 84 HOH HOH . Q 5 HOH A 10 317 12 HOH HOH . Q 5 HOH A 11 318 87 HOH HOH . Q 5 HOH A 12 319 14 HOH HOH . Q 5 HOH A 13 320 96 HOH HOH . Q 5 HOH A 14 321 89 HOH HOH . Q 5 HOH A 15 322 17 HOH HOH . Q 5 HOH A 16 323 18 HOH HOH . Q 5 HOH A 17 324 104 HOH HOH . Q 5 HOH A 18 325 93 HOH HOH . Q 5 HOH A 19 326 107 HOH HOH . Q 5 HOH A 20 327 108 HOH HOH . Q 5 HOH A 21 328 23 HOH HOH . Q 5 HOH A 22 329 24 HOH HOH . Q 5 HOH A 23 330 98 HOH HOH . Q 5 HOH A 24 331 99 HOH HOH . Q 5 HOH A 25 332 100 HOH HOH . Q 5 HOH A 26 333 110 HOH HOH . Q 5 HOH A 27 334 102 HOH HOH . Q 5 HOH A 28 335 30 HOH HOH . Q 5 HOH A 29 336 31 HOH HOH . Q 5 HOH A 30 337 32 HOH HOH . Q 5 HOH A 31 338 111 HOH HOH . Q 5 HOH A 32 339 34 HOH HOH . Q 5 HOH A 33 340 35 HOH HOH . Q 5 HOH A 34 341 36 HOH HOH . Q 5 HOH A 35 342 37 HOH HOH . Q 5 HOH A 36 343 38 HOH HOH . Q 5 HOH A 37 344 39 HOH HOH . Q 5 HOH A 38 345 40 HOH HOH . Q 5 HOH A 39 346 41 HOH HOH . Q 5 HOH A 40 347 42 HOH HOH . Q 5 HOH A 41 348 43 HOH HOH . Q 5 HOH A 42 349 44 HOH HOH . Q 5 HOH A 43 350 45 HOH HOH . Q 5 HOH A 44 351 46 HOH HOH . Q 5 HOH A 45 352 47 HOH HOH . Q 5 HOH A 46 353 48 HOH HOH . Q 5 HOH A 47 354 122 HOH HOH . Q 5 HOH A 48 355 112 HOH HOH . Q 5 HOH A 49 356 51 HOH HOH . Q 5 HOH A 50 357 52 HOH HOH . Q 5 HOH A 51 358 126 HOH HOH . Q 5 HOH A 52 359 54 HOH HOH . Q 5 HOH A 53 360 113 HOH HOH . Q 5 HOH A 54 361 114 HOH HOH . Q 5 HOH A 55 362 57 HOH HOH . Q 5 HOH A 56 363 115 HOH HOH . Q 5 HOH A 57 364 121 HOH HOH . Q 5 HOH A 58 365 127 HOH HOH . Q 5 HOH A 59 366 134 HOH HOH . Q 5 HOH A 60 367 62 HOH HOH . Q 5 HOH A 61 368 137 HOH HOH . Q 5 HOH A 62 369 64 HOH HOH . Q 5 HOH A 63 370 138 HOH HOH . Q 5 HOH A 64 371 66 HOH HOH . Q 5 HOH A 65 372 140 HOH HOH . Q 5 HOH A 66 373 68 HOH HOH . Q 5 HOH A 67 374 69 HOH HOH . Q 5 HOH A 68 375 139 HOH HOH . Q 5 HOH A 69 376 144 HOH HOH . Q 5 HOH A 70 377 72 HOH HOH . Q 5 HOH A 71 378 142 HOH HOH . Q 5 HOH A 72 379 162 HOH HOH . Q 5 HOH A 73 380 158 HOH HOH . Q 5 HOH A 74 381 149 HOH HOH . Q 5 HOH A 75 382 150 HOH HOH . Q 5 HOH A 76 383 151 HOH HOH . Q 5 HOH A 77 384 152 HOH HOH . Q 5 HOH A 78 385 168 HOH HOH . Q 5 HOH A 79 386 169 HOH HOH . Q 5 HOH A 80 387 155 HOH HOH . Q 5 HOH A 81 388 171 HOH HOH . Q 5 HOH A 82 389 172 HOH HOH . Q 5 HOH A 83 390 173 HOH HOH . Q 5 HOH A 84 391 174 HOH HOH . Q 5 HOH A 85 392 159 HOH HOH . Q 5 HOH A 86 393 176 HOH HOH . Q 5 HOH A 87 394 177 HOH HOH . Q 5 HOH A 88 395 161 HOH HOH . Q 5 HOH A 89 397 180 HOH HOH . Q 5 HOH A 90 404 187 HOH HOH . Q 5 HOH A 91 405 188 HOH HOH . Q 5 HOH A 92 409 192 HOH HOH . Q 5 HOH A 93 411 194 HOH HOH . Q 5 HOH A 94 414 197 HOH HOH . Q 5 HOH A 95 415 198 HOH HOH . Q 5 HOH A 96 418 201 HOH HOH . Q 5 HOH A 97 420 203 HOH HOH . Q 5 HOH A 98 421 204 HOH HOH . Q 5 HOH A 99 423 206 HOH HOH . Q 5 HOH A 100 424 207 HOH HOH . Q 5 HOH A 101 425 208 HOH HOH . Q 5 HOH A 102 426 209 HOH HOH . Q 5 HOH A 103 427 210 HOH HOH . Q 5 HOH A 104 428 211 HOH HOH . Q 5 HOH A 105 431 214 HOH HOH . Q 5 HOH A 106 432 215 HOH HOH . Q 5 HOH A 107 433 216 HOH HOH . Q 5 HOH A 108 434 217 HOH HOH . Q 5 HOH A 109 436 219 HOH HOH . Q 5 HOH A 110 438 221 HOH HOH . Q 5 HOH A 111 439 222 HOH HOH . Q 5 HOH A 112 440 223 HOH HOH . Q 5 HOH A 113 441 224 HOH HOH . Q 5 HOH A 114 442 225 HOH HOH . Q 5 HOH A 115 443 226 HOH HOH . Q 5 HOH A 116 444 227 HOH HOH . Q 5 HOH A 117 455 238 HOH HOH . Q 5 HOH A 118 456 239 HOH HOH . Q 5 HOH A 119 457 240 HOH HOH . Q 5 HOH A 120 458 241 HOH HOH . Q 5 HOH A 121 459 242 HOH HOH . Q 5 HOH A 122 460 243 HOH HOH . Q 5 HOH A 123 464 247 HOH HOH . Q 5 HOH A 124 465 248 HOH HOH . Q 5 HOH A 125 466 249 HOH HOH . Q 5 HOH A 126 468 251 HOH HOH . R 5 HOH B 1 306 1 HOH HOH . R 5 HOH B 2 307 2 HOH HOH . R 5 HOH B 3 308 3 HOH HOH . R 5 HOH B 4 309 4 HOH HOH . R 5 HOH B 5 310 78 HOH HOH . R 5 HOH B 6 311 74 HOH HOH . R 5 HOH B 7 312 7 HOH HOH . R 5 HOH B 8 313 81 HOH HOH . R 5 HOH B 9 314 82 HOH HOH . R 5 HOH B 10 315 10 HOH HOH . R 5 HOH B 11 316 11 HOH HOH . R 5 HOH B 12 317 85 HOH HOH . R 5 HOH B 13 318 13 HOH HOH . R 5 HOH B 14 319 76 HOH HOH . R 5 HOH B 15 320 15 HOH HOH . R 5 HOH B 16 321 16 HOH HOH . R 5 HOH B 17 322 90 HOH HOH . R 5 HOH B 18 323 91 HOH HOH . R 5 HOH B 19 324 19 HOH HOH . R 5 HOH B 20 325 20 HOH HOH . R 5 HOH B 21 326 21 HOH HOH . R 5 HOH B 22 327 22 HOH HOH . R 5 HOH B 23 328 83 HOH HOH . R 5 HOH B 24 329 97 HOH HOH . R 5 HOH B 25 330 25 HOH HOH . R 5 HOH B 26 331 26 HOH HOH . R 5 HOH B 27 332 27 HOH HOH . R 5 HOH B 28 333 28 HOH HOH . R 5 HOH B 29 334 29 HOH HOH . R 5 HOH B 30 335 103 HOH HOH . R 5 HOH B 31 336 86 HOH HOH . R 5 HOH B 32 337 105 HOH HOH . R 5 HOH B 33 338 33 HOH HOH . R 5 HOH B 34 339 88 HOH HOH . R 5 HOH B 35 340 92 HOH HOH . R 5 HOH B 36 341 109 HOH HOH . R 5 HOH B 37 342 94 HOH HOH . R 5 HOH B 38 343 95 HOH HOH . R 5 HOH B 39 344 101 HOH HOH . R 5 HOH B 40 345 106 HOH HOH . R 5 HOH B 41 346 123 HOH HOH . R 5 HOH B 42 347 128 HOH HOH . R 5 HOH B 43 348 116 HOH HOH . R 5 HOH B 44 349 117 HOH HOH . R 5 HOH B 45 350 118 HOH HOH . R 5 HOH B 46 351 119 HOH HOH . R 5 HOH B 47 352 120 HOH HOH . R 5 HOH B 48 353 129 HOH HOH . R 5 HOH B 49 354 49 HOH HOH . R 5 HOH B 50 355 50 HOH HOH . R 5 HOH B 51 356 124 HOH HOH . R 5 HOH B 52 357 125 HOH HOH . R 5 HOH B 53 358 53 HOH HOH . R 5 HOH B 54 359 131 HOH HOH . R 5 HOH B 55 360 55 HOH HOH . R 5 HOH B 56 361 56 HOH HOH . R 5 HOH B 57 362 130 HOH HOH . R 5 HOH B 58 363 58 HOH HOH . R 5 HOH B 59 364 59 HOH HOH . R 5 HOH B 60 365 60 HOH HOH . R 5 HOH B 61 366 61 HOH HOH . R 5 HOH B 62 367 135 HOH HOH . R 5 HOH B 63 368 63 HOH HOH . R 5 HOH B 64 369 132 HOH HOH . R 5 HOH B 65 370 65 HOH HOH . R 5 HOH B 66 371 133 HOH HOH . R 5 HOH B 67 372 67 HOH HOH . R 5 HOH B 68 373 141 HOH HOH . R 5 HOH B 69 374 136 HOH HOH . R 5 HOH B 70 375 70 HOH HOH . R 5 HOH B 71 376 71 HOH HOH . R 5 HOH B 72 377 145 HOH HOH . R 5 HOH B 73 378 73 HOH HOH . R 5 HOH B 74 379 147 HOH HOH . R 5 HOH B 75 380 163 HOH HOH . R 5 HOH B 76 381 164 HOH HOH . R 5 HOH B 77 382 165 HOH HOH . R 5 HOH B 78 383 166 HOH HOH . R 5 HOH B 79 384 167 HOH HOH . R 5 HOH B 80 385 153 HOH HOH . R 5 HOH B 81 386 154 HOH HOH . R 5 HOH B 82 387 170 HOH HOH . R 5 HOH B 83 388 156 HOH HOH . R 5 HOH B 84 389 157 HOH HOH . R 5 HOH B 85 390 143 HOH HOH . R 5 HOH B 86 391 146 HOH HOH . R 5 HOH B 87 392 175 HOH HOH . R 5 HOH B 88 393 148 HOH HOH . R 5 HOH B 89 394 160 HOH HOH . R 5 HOH B 90 395 178 HOH HOH . R 5 HOH B 91 396 179 HOH HOH . R 5 HOH B 92 398 181 HOH HOH . R 5 HOH B 93 399 182 HOH HOH . R 5 HOH B 94 400 183 HOH HOH . R 5 HOH B 95 401 184 HOH HOH . R 5 HOH B 96 402 185 HOH HOH . R 5 HOH B 97 403 186 HOH HOH . R 5 HOH B 98 406 189 HOH HOH . R 5 HOH B 99 407 190 HOH HOH . R 5 HOH B 100 408 191 HOH HOH . R 5 HOH B 101 410 193 HOH HOH . R 5 HOH B 102 412 195 HOH HOH . R 5 HOH B 103 413 196 HOH HOH . R 5 HOH B 104 416 199 HOH HOH . R 5 HOH B 105 417 200 HOH HOH . R 5 HOH B 106 419 202 HOH HOH . R 5 HOH B 107 422 205 HOH HOH . R 5 HOH B 108 429 212 HOH HOH . R 5 HOH B 109 430 213 HOH HOH . R 5 HOH B 110 435 218 HOH HOH . R 5 HOH B 111 437 220 HOH HOH . R 5 HOH B 112 445 228 HOH HOH . R 5 HOH B 113 446 229 HOH HOH . R 5 HOH B 114 447 230 HOH HOH . R 5 HOH B 115 448 231 HOH HOH . R 5 HOH B 116 449 232 HOH HOH . R 5 HOH B 117 450 233 HOH HOH . R 5 HOH B 118 451 234 HOH HOH . R 5 HOH B 119 452 235 HOH HOH . R 5 HOH B 120 453 236 HOH HOH . R 5 HOH B 121 454 237 HOH HOH . R 5 HOH B 122 461 244 HOH HOH . R 5 HOH B 123 462 245 HOH HOH . R 5 HOH B 124 463 246 HOH HOH . R 5 HOH B 125 467 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 3 4.457 51.287 81.427 1 38.36 ? C1 GOL 2001 A 1 HETATM 2 O O1 GOL . . . J 3 5.089 52.46 80.943 1 40.34 ? O1 GOL 2001 A 1 HETATM 3 C C2 GOL . . . J 3 4.066 51.467 82.896 1 37.51 ? C2 GOL 2001 A 1 HETATM 4 O O2 GOL . . . J 3 4.93 50.677 83.666 1 37.89 ? O2 GOL 2001 A 1 HETATM 5 C C3 GOL . . . J 3 2.645 50.966 83.159 1 37.77 ? C3 GOL 2001 A 1 HETATM 6 O O3 GOL . . . J 3 1.997 51.515 84.3 1 35.1 ? O3 GOL 2001 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #