data_3FXU # _model_server_result.job_id thYpK68HSniliUa92O3k9A _model_server_result.datetime_utc '2025-04-24 08:40:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fxu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":2001}' # _entry.id 3FXU # _exptl.entry_id 3FXU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.51 _cell.angle_gamma 90 _cell.entry_id 3FXU _cell.length_a 135.22 _cell.length_b 52.11 _cell.length_c 109.28 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FXU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -40.068999 0 101.66904 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 190 n y N1 C5 IMD sing 191 n y N1 HN1 IMD sing 192 n n C2 N3 IMD doub 193 n y C2 H2 IMD sing 194 n n N3 C4 IMD sing 195 n y N3 HN3 IMD sing 196 n n C4 C5 IMD doub 197 n y C4 H4 IMD sing 198 n n C5 H5 IMD sing 199 n n # _atom_sites.entry_id 3FXU _atom_sites.fract_transf_matrix[1][1] 0.007395 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002915 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009836 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TSU A 1 1001 1001 TSU TSU . D 2 TSU A 1 1002 1002 TSU TSU . E 2 TSU A 1 1003 1003 TSU TSU . F 2 TSU A 1 1004 1004 TSU TSU . G 2 TSU A 1 1006 1006 TSU TSU . H 2 TSU A 1 1008 1008 TSU TSU . I 3 IMD A 1 2001 2001 IMD IMD . J 4 GOL A 1 3001 3001 GOL GOL . K 4 GOL A 1 3002 3002 GOL GOL . L 4 GOL A 1 3003 3003 GOL GOL . M 5 CL A 1 5002 5002 CL CL . N 2 TSU B 1 1005 1005 TSU TSU . O 2 TSU B 1 1007 1007 TSU TSU . P 2 TSU B 1 1009 1009 TSU TSU . Q 2 TSU B 1 1010 1010 TSU TSU . R 2 TSU B 1 1011 1011 TSU TSU . S 4 GOL B 1 3004 3004 GOL GOL . T 6 FMT B 1 4001 4001 FMT FMT . U 5 CL B 1 5001 5001 CL CL . V 5 CL B 1 5003 5003 CL CL . W 7 HOH A 1 307 2 HOH HOH . W 7 HOH A 2 308 76 HOH HOH . W 7 HOH A 3 309 3 HOH HOH . W 7 HOH A 4 310 8 HOH HOH . W 7 HOH A 5 311 10 HOH HOH . W 7 HOH A 6 312 12 HOH HOH . W 7 HOH A 7 313 81 HOH HOH . W 7 HOH A 8 314 82 HOH HOH . W 7 HOH A 9 315 83 HOH HOH . W 7 HOH A 10 316 11 HOH HOH . W 7 HOH A 11 317 85 HOH HOH . W 7 HOH A 12 318 18 HOH HOH . W 7 HOH A 13 319 87 HOH HOH . W 7 HOH A 14 320 15 HOH HOH . W 7 HOH A 15 321 19 HOH HOH . W 7 HOH A 16 322 90 HOH HOH . W 7 HOH A 17 323 91 HOH HOH . W 7 HOH A 18 324 92 HOH HOH . W 7 HOH A 19 325 26 HOH HOH . W 7 HOH A 20 326 21 HOH HOH . W 7 HOH A 21 327 38 HOH HOH . W 7 HOH A 22 328 23 HOH HOH . W 7 HOH A 23 329 24 HOH HOH . W 7 HOH A 24 330 39 HOH HOH . W 7 HOH A 25 331 99 HOH HOH . W 7 HOH A 26 332 27 HOH HOH . W 7 HOH A 27 333 101 HOH HOH . W 7 HOH A 28 334 29 HOH HOH . W 7 HOH A 29 335 103 HOH HOH . W 7 HOH A 30 336 42 HOH HOH . W 7 HOH A 31 337 50 HOH HOH . W 7 HOH A 32 338 106 HOH HOH . W 7 HOH A 33 339 107 HOH HOH . W 7 HOH A 34 340 35 HOH HOH . W 7 HOH A 35 341 109 HOH HOH . W 7 HOH A 36 342 52 HOH HOH . W 7 HOH A 37 343 111 HOH HOH . W 7 HOH A 38 344 112 HOH HOH . W 7 HOH A 39 345 113 HOH HOH . W 7 HOH A 40 346 114 HOH HOH . W 7 HOH A 41 347 115 HOH HOH . W 7 HOH A 42 348 43 HOH HOH . W 7 HOH A 43 349 53 HOH HOH . W 7 HOH A 44 350 118 HOH HOH . W 7 HOH A 45 351 46 HOH HOH . W 7 HOH A 46 352 120 HOH HOH . W 7 HOH A 47 353 121 HOH HOH . W 7 HOH A 48 354 122 HOH HOH . W 7 HOH A 49 355 123 HOH HOH . W 7 HOH A 50 356 51 HOH HOH . W 7 HOH A 51 357 125 HOH HOH . W 7 HOH A 52 358 126 HOH HOH . W 7 HOH A 53 359 127 HOH HOH . W 7 HOH A 54 360 58 HOH HOH . W 7 HOH A 55 361 72 HOH HOH . W 7 HOH A 56 362 130 HOH HOH . W 7 HOH A 57 363 131 HOH HOH . W 7 HOH A 58 364 59 HOH HOH . W 7 HOH A 59 365 133 HOH HOH . W 7 HOH A 60 369 137 HOH HOH . W 7 HOH A 61 371 139 HOH HOH . W 7 HOH A 62 372 140 HOH HOH . W 7 HOH A 63 374 142 HOH HOH . W 7 HOH A 64 377 145 HOH HOH . W 7 HOH A 65 378 73 HOH HOH . W 7 HOH A 66 379 147 HOH HOH . W 7 HOH A 67 380 148 HOH HOH . W 7 HOH A 68 381 149 HOH HOH . W 7 HOH A 69 383 151 HOH HOH . W 7 HOH A 70 386 154 HOH HOH . W 7 HOH A 71 387 155 HOH HOH . W 7 HOH A 72 388 156 HOH HOH . W 7 HOH A 73 390 158 HOH HOH . W 7 HOH A 74 393 161 HOH HOH . W 7 HOH A 75 394 162 HOH HOH . W 7 HOH A 76 399 170 HOH HOH . W 7 HOH A 77 400 171 HOH HOH . W 7 HOH A 78 401 172 HOH HOH . W 7 HOH A 79 402 173 HOH HOH . W 7 HOH A 80 403 174 HOH HOH . W 7 HOH A 81 404 175 HOH HOH . W 7 HOH A 82 405 176 HOH HOH . W 7 HOH A 83 406 177 HOH HOH . W 7 HOH A 84 407 178 HOH HOH . W 7 HOH A 85 408 179 HOH HOH . W 7 HOH A 86 409 180 HOH HOH . W 7 HOH A 87 410 181 HOH HOH . W 7 HOH A 88 411 182 HOH HOH . W 7 HOH A 89 412 183 HOH HOH . W 7 HOH A 90 413 184 HOH HOH . W 7 HOH A 91 414 185 HOH HOH . W 7 HOH A 92 415 186 HOH HOH . W 7 HOH A 93 416 187 HOH HOH . W 7 HOH A 94 417 188 HOH HOH . W 7 HOH A 95 418 189 HOH HOH . W 7 HOH A 96 420 191 HOH HOH . W 7 HOH A 97 435 207 HOH HOH . W 7 HOH A 98 436 208 HOH HOH . W 7 HOH A 99 438 210 HOH HOH . W 7 HOH A 100 439 211 HOH HOH . X 7 HOH B 1 306 74 HOH HOH . X 7 HOH B 2 307 75 HOH HOH . X 7 HOH B 3 308 1 HOH HOH . X 7 HOH B 4 309 77 HOH HOH . X 7 HOH B 5 310 78 HOH HOH . X 7 HOH B 6 311 79 HOH HOH . X 7 HOH B 7 312 80 HOH HOH . X 7 HOH B 8 313 4 HOH HOH . X 7 HOH B 9 314 9 HOH HOH . X 7 HOH B 10 315 5 HOH HOH . X 7 HOH B 11 316 84 HOH HOH . X 7 HOH B 12 317 6 HOH HOH . X 7 HOH B 13 318 86 HOH HOH . X 7 HOH B 14 319 14 HOH HOH . X 7 HOH B 15 320 88 HOH HOH . X 7 HOH B 16 321 89 HOH HOH . X 7 HOH B 17 322 17 HOH HOH . X 7 HOH B 18 323 7 HOH HOH . X 7 HOH B 19 324 13 HOH HOH . X 7 HOH B 20 325 93 HOH HOH . X 7 HOH B 21 326 94 HOH HOH . X 7 HOH B 22 327 95 HOH HOH . X 7 HOH B 23 328 96 HOH HOH . X 7 HOH B 24 329 97 HOH HOH . X 7 HOH B 25 330 98 HOH HOH . X 7 HOH B 26 331 16 HOH HOH . X 7 HOH B 27 332 100 HOH HOH . X 7 HOH B 28 333 28 HOH HOH . X 7 HOH B 29 334 102 HOH HOH . X 7 HOH B 30 335 30 HOH HOH . X 7 HOH B 31 336 104 HOH HOH . X 7 HOH B 32 337 105 HOH HOH . X 7 HOH B 33 338 33 HOH HOH . X 7 HOH B 34 339 34 HOH HOH . X 7 HOH B 35 340 108 HOH HOH . X 7 HOH B 36 341 36 HOH HOH . X 7 HOH B 37 342 110 HOH HOH . X 7 HOH B 38 343 20 HOH HOH . X 7 HOH B 39 344 22 HOH HOH . X 7 HOH B 40 345 40 HOH HOH . X 7 HOH B 41 346 41 HOH HOH . X 7 HOH B 42 347 25 HOH HOH . X 7 HOH B 43 348 116 HOH HOH . X 7 HOH B 44 349 117 HOH HOH . X 7 HOH B 45 350 45 HOH HOH . X 7 HOH B 46 351 119 HOH HOH . X 7 HOH B 47 352 47 HOH HOH . X 7 HOH B 48 353 48 HOH HOH . X 7 HOH B 49 354 49 HOH HOH . X 7 HOH B 50 355 31 HOH HOH . X 7 HOH B 51 356 124 HOH HOH . X 7 HOH B 52 357 32 HOH HOH . X 7 HOH B 53 358 37 HOH HOH . X 7 HOH B 54 359 54 HOH HOH . X 7 HOH B 55 360 128 HOH HOH . X 7 HOH B 56 361 129 HOH HOH . X 7 HOH B 57 362 57 HOH HOH . X 7 HOH B 58 363 44 HOH HOH . X 7 HOH B 59 364 132 HOH HOH . X 7 HOH B 60 365 60 HOH HOH . X 7 HOH B 61 366 134 HOH HOH . X 7 HOH B 62 367 135 HOH HOH . X 7 HOH B 63 368 136 HOH HOH . X 7 HOH B 64 369 64 HOH HOH . X 7 HOH B 65 370 138 HOH HOH . X 7 HOH B 66 371 66 HOH HOH . X 7 HOH B 67 372 67 HOH HOH . X 7 HOH B 68 373 141 HOH HOH . X 7 HOH B 69 374 69 HOH HOH . X 7 HOH B 70 375 143 HOH HOH . X 7 HOH B 71 376 144 HOH HOH . X 7 HOH B 72 377 55 HOH HOH . X 7 HOH B 73 378 146 HOH HOH . X 7 HOH B 74 379 56 HOH HOH . X 7 HOH B 75 380 61 HOH HOH . X 7 HOH B 76 381 62 HOH HOH . X 7 HOH B 77 382 150 HOH HOH . X 7 HOH B 78 383 63 HOH HOH . X 7 HOH B 79 384 152 HOH HOH . X 7 HOH B 80 385 153 HOH HOH . X 7 HOH B 81 386 65 HOH HOH . X 7 HOH B 82 387 68 HOH HOH . X 7 HOH B 83 388 70 HOH HOH . X 7 HOH B 84 389 157 HOH HOH . X 7 HOH B 85 390 71 HOH HOH . X 7 HOH B 86 391 159 HOH HOH . X 7 HOH B 87 392 160 HOH HOH . X 7 HOH B 88 395 163 HOH HOH . X 7 HOH B 89 396 164 HOH HOH . X 7 HOH B 90 397 165 HOH HOH . X 7 HOH B 91 398 166 HOH HOH . X 7 HOH B 92 419 190 HOH HOH . X 7 HOH B 93 421 192 HOH HOH . X 7 HOH B 94 422 193 HOH HOH . X 7 HOH B 95 423 194 HOH HOH . X 7 HOH B 96 424 195 HOH HOH . X 7 HOH B 97 425 196 HOH HOH . X 7 HOH B 98 426 197 HOH HOH . X 7 HOH B 99 427 198 HOH HOH . X 7 HOH B 100 428 199 HOH HOH . X 7 HOH B 101 429 200 HOH HOH . X 7 HOH B 102 430 201 HOH HOH . X 7 HOH B 103 431 202 HOH HOH . X 7 HOH B 104 432 203 HOH HOH . X 7 HOH B 105 433 205 HOH HOH . X 7 HOH B 106 434 206 HOH HOH . X 7 HOH B 107 437 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . I 3 -3.09 47.233 71.981 1 46.64 ? N1 IMD 2001 A 1 HETATM 2 C C2 IMD . . . I 3 -2.171 47.844 72.768 1 46.86 ? C2 IMD 2001 A 1 HETATM 3 N N3 IMD . . . I 3 -2.821 48.552 73.731 1 47.98 ? N3 IMD 2001 A 1 HETATM 4 C C4 IMD . . . I 3 -4.156 48.389 73.553 1 48.21 ? C4 IMD 2001 A 1 HETATM 5 C C5 IMD . . . I 3 -4.317 47.557 72.449 1 46.92 ? C5 IMD 2001 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #