data_3FYZ # _model_server_result.job_id WK9G8xp-q9BXq8GuFHVeyw _model_server_result.datetime_utc '2024-11-16 12:58:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3FYZ # _exptl.entry_id 3FYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FYZ _cell.length_a 102.76 _cell.length_b 102.76 _cell.length_c 83.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 52 A PHE 83 1_555 A N KCX 53 A KCX 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C KCX 53 A KCX 84 1_555 A N MET 54 A MET 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 298 n n O1 HO1 PG4 sing 299 n n C1 C2 PG4 sing 300 n n C1 H11 PG4 sing 301 n n C1 H12 PG4 sing 302 n n C2 O2 PG4 sing 303 n n C2 H21 PG4 sing 304 n n C2 H22 PG4 sing 305 n n O2 C3 PG4 sing 306 n n C3 C4 PG4 sing 307 n n C3 H31 PG4 sing 308 n n C3 H32 PG4 sing 309 n n C4 O3 PG4 sing 310 n n C4 H41 PG4 sing 311 n n C4 H42 PG4 sing 312 n n O3 C5 PG4 sing 313 n n C5 C6 PG4 sing 314 n n C5 H51 PG4 sing 315 n n C5 H52 PG4 sing 316 n n C6 O4 PG4 sing 317 n n C6 H61 PG4 sing 318 n n C6 H62 PG4 sing 319 n n O4 C7 PG4 sing 320 n n C7 C8 PG4 sing 321 n n C7 H71 PG4 sing 322 n n C7 H72 PG4 sing 323 n n C8 O5 PG4 sing 324 n n C8 H81 PG4 sing 325 n n C8 H82 PG4 sing 326 n n O5 HO5 PG4 sing 327 n n # _atom_sites.entry_id 3FYZ _atom_sites.fract_transf_matrix[1][1] 0.009731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MXC A 1 300 300 MXC MXC . C 3 PG4 A 1 1 1 PG4 6PE . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 7 7 HOH HOH . D 4 HOH A 6 8 8 HOH HOH . D 4 HOH A 7 9 9 HOH HOH . D 4 HOH A 8 10 10 HOH HOH . D 4 HOH A 9 11 11 HOH HOH . D 4 HOH A 10 12 12 HOH HOH . D 4 HOH A 11 13 13 HOH HOH . D 4 HOH A 12 14 14 HOH HOH . D 4 HOH A 13 15 15 HOH HOH . D 4 HOH A 14 16 16 HOH HOH . D 4 HOH A 15 17 17 HOH HOH . D 4 HOH A 16 18 18 HOH HOH . D 4 HOH A 17 19 19 HOH HOH . D 4 HOH A 18 20 20 HOH HOH . D 4 HOH A 19 21 21 HOH HOH . D 4 HOH A 20 22 22 HOH HOH . D 4 HOH A 21 23 23 HOH HOH . D 4 HOH A 22 24 24 HOH HOH . D 4 HOH A 23 25 25 HOH HOH . D 4 HOH A 24 26 26 HOH HOH . D 4 HOH A 25 27 27 HOH HOH . D 4 HOH A 26 28 28 HOH HOH . D 4 HOH A 27 29 29 HOH HOH . D 4 HOH A 28 30 30 HOH HOH . D 4 HOH A 29 31 31 HOH HOH . D 4 HOH A 30 276 1 HOH HOH . D 4 HOH A 31 277 32 HOH HOH . D 4 HOH A 32 278 33 HOH HOH . D 4 HOH A 33 279 34 HOH HOH . D 4 HOH A 34 280 35 HOH HOH . D 4 HOH A 35 281 36 HOH HOH . D 4 HOH A 36 282 37 HOH HOH . D 4 HOH A 37 283 38 HOH HOH . D 4 HOH A 38 284 39 HOH HOH . D 4 HOH A 39 285 40 HOH HOH . D 4 HOH A 40 286 41 HOH HOH . D 4 HOH A 41 287 42 HOH HOH . D 4 HOH A 42 288 43 HOH HOH . D 4 HOH A 43 289 44 HOH HOH . D 4 HOH A 44 290 45 HOH HOH . D 4 HOH A 45 291 46 HOH HOH . D 4 HOH A 46 292 47 HOH HOH . D 4 HOH A 47 293 48 HOH HOH . D 4 HOH A 48 294 49 HOH HOH . D 4 HOH A 49 295 50 HOH HOH . D 4 HOH A 50 296 51 HOH HOH . D 4 HOH A 51 297 52 HOH HOH . D 4 HOH A 52 298 53 HOH HOH . D 4 HOH A 53 299 54 HOH HOH . D 4 HOH A 54 301 55 HOH HOH . D 4 HOH A 55 302 56 HOH HOH . D 4 HOH A 56 303 57 HOH HOH . D 4 HOH A 57 304 58 HOH HOH . D 4 HOH A 58 305 59 HOH HOH . D 4 HOH A 59 306 60 HOH HOH . D 4 HOH A 60 307 61 HOH HOH . D 4 HOH A 61 308 62 HOH HOH . D 4 HOH A 62 309 63 HOH HOH . D 4 HOH A 63 310 64 HOH HOH . D 4 HOH A 64 311 65 HOH HOH . D 4 HOH A 65 312 66 HOH HOH . D 4 HOH A 66 313 67 HOH HOH . D 4 HOH A 67 314 68 HOH HOH . D 4 HOH A 68 315 69 HOH HOH . D 4 HOH A 69 316 70 HOH HOH . D 4 HOH A 70 317 71 HOH HOH . D 4 HOH A 71 318 72 HOH HOH . D 4 HOH A 72 319 73 HOH HOH . D 4 HOH A 73 320 74 HOH HOH . D 4 HOH A 74 321 75 HOH HOH . D 4 HOH A 75 322 76 HOH HOH . D 4 HOH A 76 323 77 HOH HOH . D 4 HOH A 77 324 78 HOH HOH . D 4 HOH A 78 325 79 HOH HOH . D 4 HOH A 79 326 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . C 3 80.771 11.898 34.376 1 56.11 ? O1 PG4 1 A 1 HETATM 2 C C1 PG4 . . . C 3 81.236 11.365 33.155 1 54.89 ? C1 PG4 1 A 1 HETATM 3 C C2 PG4 . . . C 3 81.956 12.471 32.397 1 53.94 ? C2 PG4 1 A 1 HETATM 4 O O2 PG4 . . . C 3 82.385 11.858 31.183 1 52.53 ? O2 PG4 1 A 1 HETATM 5 C C3 PG4 . . . C 3 82.564 12.782 30.044 1 50.33 ? C3 PG4 1 A 1 HETATM 6 C C4 PG4 . . . C 3 81.384 12.838 29.117 1 47.73 ? C4 PG4 1 A 1 HETATM 7 O O3 PG4 . . . C 3 81.016 14.225 28.896 1 48.32 ? O3 PG4 1 A 1 HETATM 8 C C5 PG4 . . . C 3 80.915 14.514 27.486 1 46.28 ? C5 PG4 1 A 1 HETATM 9 C C6 PG4 . . . C 3 81.886 15.642 27.226 1 42.52 ? C6 PG4 1 A 1 HETATM 10 O O4 PG4 . . . C 3 81.918 16.057 25.831 1 40.55 ? O4 PG4 1 A 1 HETATM 11 C C7 PG4 . . . C 3 82.877 15.245 25.043 1 39.29 ? C7 PG4 1 A 1 HETATM 12 C C8 PG4 . . . C 3 83.052 15.847 23.643 1 39.1 ? C8 PG4 1 A 1 HETATM 13 O O5 PG4 . . . C 3 84.471 15.819 23.265 1 36.26 ? O5 PG4 1 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 13 #