data_3FZ4 # _model_server_result.job_id phnewzPq6NU1A5zHldMvVw _model_server_result.datetime_utc '2024-11-09 02:23:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 3FZ4 # _exptl.entry_id 3FZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FZ4 _cell.length_a 31.857 _cell.length_b 41.357 _cell.length_c 76.795 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 A CYS 10 1_555 A SG CYS 16 A CYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N LEU 5 A LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 A C GLY 92 A GLY 89 1_555 A N MSE 93 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 A C MSE 93 A MSE 90 1_555 A N LEU 94 A LEU 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 A O GLN 108 A GLN 105 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? metalc ? metalc2 A O GLY 110 A GLY 107 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc3 A OH TYR 115 A TYR 112 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 92 n n C O2 FMT sing 93 n n C H FMT sing 94 n n O2 HO2 FMT sing 95 n n # _atom_sites.entry_id 3FZ4 _atom_sites.fract_transf_matrix[1][1] 0.03139 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02418 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 201 1 NA NA . C 3 EDO A 1 202 1 EDO EDO . D 4 FMT A 1 203 1 FMT FMT . E 4 FMT A 1 204 2 FMT FMT . F 4 FMT A 1 205 3 FMT FMT . G 4 FMT A 1 206 4 FMT FMT . H 5 HOH A 1 301 1 HOH HOH . H 5 HOH A 2 302 2 HOH HOH . H 5 HOH A 3 303 3 HOH HOH . H 5 HOH A 4 304 4 HOH HOH . H 5 HOH A 5 305 5 HOH HOH . H 5 HOH A 6 306 6 HOH HOH . H 5 HOH A 7 307 7 HOH HOH . H 5 HOH A 8 308 8 HOH HOH . H 5 HOH A 9 309 9 HOH HOH . H 5 HOH A 10 310 10 HOH HOH . H 5 HOH A 11 311 11 HOH HOH . H 5 HOH A 12 312 12 HOH HOH . H 5 HOH A 13 313 13 HOH HOH . H 5 HOH A 14 314 14 HOH HOH . H 5 HOH A 15 315 15 HOH HOH . H 5 HOH A 16 316 16 HOH HOH . H 5 HOH A 17 317 17 HOH HOH . H 5 HOH A 18 318 18 HOH HOH . H 5 HOH A 19 319 19 HOH HOH . H 5 HOH A 20 320 20 HOH HOH . H 5 HOH A 21 321 21 HOH HOH . H 5 HOH A 22 322 22 HOH HOH . H 5 HOH A 23 323 23 HOH HOH . H 5 HOH A 24 324 24 HOH HOH . H 5 HOH A 25 325 25 HOH HOH . H 5 HOH A 26 326 26 HOH HOH . H 5 HOH A 27 327 27 HOH HOH . H 5 HOH A 28 328 28 HOH HOH . H 5 HOH A 29 329 29 HOH HOH . H 5 HOH A 30 330 30 HOH HOH . H 5 HOH A 31 331 31 HOH HOH . H 5 HOH A 32 332 32 HOH HOH . H 5 HOH A 33 333 33 HOH HOH . H 5 HOH A 34 334 34 HOH HOH . H 5 HOH A 35 335 35 HOH HOH . H 5 HOH A 36 336 36 HOH HOH . H 5 HOH A 37 337 37 HOH HOH . H 5 HOH A 38 338 38 HOH HOH . H 5 HOH A 39 339 39 HOH HOH . H 5 HOH A 40 340 40 HOH HOH . H 5 HOH A 41 341 41 HOH HOH . H 5 HOH A 42 342 42 HOH HOH . H 5 HOH A 43 343 43 HOH HOH . H 5 HOH A 44 344 44 HOH HOH . H 5 HOH A 45 345 45 HOH HOH . H 5 HOH A 46 346 46 HOH HOH . H 5 HOH A 47 347 47 HOH HOH . H 5 HOH A 48 348 48 HOH HOH . H 5 HOH A 49 349 49 HOH HOH . H 5 HOH A 50 350 50 HOH HOH . H 5 HOH A 51 351 51 HOH HOH . H 5 HOH A 52 352 52 HOH HOH . H 5 HOH A 53 353 53 HOH HOH . H 5 HOH A 54 354 54 HOH HOH . H 5 HOH A 55 355 55 HOH HOH . H 5 HOH A 56 356 56 HOH HOH . H 5 HOH A 57 357 57 HOH HOH . H 5 HOH A 58 358 58 HOH HOH . H 5 HOH A 59 359 59 HOH HOH . H 5 HOH A 60 360 60 HOH HOH . H 5 HOH A 61 361 61 HOH HOH . H 5 HOH A 62 362 62 HOH HOH . H 5 HOH A 63 363 63 HOH HOH . H 5 HOH A 64 364 64 HOH HOH . H 5 HOH A 65 365 65 HOH HOH . H 5 HOH A 66 366 66 HOH HOH . H 5 HOH A 67 367 67 HOH HOH . H 5 HOH A 68 368 68 HOH HOH . H 5 HOH A 69 370 70 HOH HOH . H 5 HOH A 70 371 71 HOH HOH . H 5 HOH A 71 372 72 HOH HOH . H 5 HOH A 72 373 73 HOH HOH . H 5 HOH A 73 374 74 HOH HOH . H 5 HOH A 74 375 75 HOH HOH . H 5 HOH A 75 376 76 HOH HOH . H 5 HOH A 76 377 77 HOH HOH . H 5 HOH A 77 378 78 HOH HOH . H 5 HOH A 78 379 79 HOH HOH . H 5 HOH A 79 380 80 HOH HOH . H 5 HOH A 80 381 81 HOH HOH . H 5 HOH A 81 382 82 HOH HOH . H 5 HOH A 82 383 83 HOH HOH . H 5 HOH A 83 384 84 HOH HOH . H 5 HOH A 84 385 85 HOH HOH . H 5 HOH A 85 386 86 HOH HOH . H 5 HOH A 86 387 87 HOH HOH . H 5 HOH A 87 388 88 HOH HOH . H 5 HOH A 88 389 89 HOH HOH . H 5 HOH A 89 390 90 HOH HOH . H 5 HOH A 90 391 91 HOH HOH . H 5 HOH A 91 392 92 HOH HOH . H 5 HOH A 92 393 93 HOH HOH . H 5 HOH A 93 394 94 HOH HOH . H 5 HOH A 94 395 95 HOH HOH . H 5 HOH A 95 396 96 HOH HOH . H 5 HOH A 96 397 97 HOH HOH . H 5 HOH A 97 398 98 HOH HOH . H 5 HOH A 98 399 99 HOH HOH . H 5 HOH A 99 400 100 HOH HOH . H 5 HOH A 100 401 101 HOH HOH . H 5 HOH A 101 402 102 HOH HOH . H 5 HOH A 102 403 103 HOH HOH . H 5 HOH A 103 404 104 HOH HOH . H 5 HOH A 104 405 105 HOH HOH . H 5 HOH A 105 406 106 HOH HOH . H 5 HOH A 106 407 107 HOH HOH . H 5 HOH A 107 408 108 HOH HOH . H 5 HOH A 108 409 109 HOH HOH . H 5 HOH A 109 411 111 HOH HOH . H 5 HOH A 110 412 112 HOH HOH . H 5 HOH A 111 413 113 HOH HOH . H 5 HOH A 112 414 114 HOH HOH . H 5 HOH A 113 415 115 HOH HOH . H 5 HOH A 114 416 116 HOH HOH . H 5 HOH A 115 417 117 HOH HOH . H 5 HOH A 116 418 118 HOH HOH . H 5 HOH A 117 419 119 HOH HOH . H 5 HOH A 118 420 120 HOH HOH . H 5 HOH A 119 421 121 HOH HOH . H 5 HOH A 120 422 122 HOH HOH . H 5 HOH A 121 423 123 HOH HOH . H 5 HOH A 122 424 124 HOH HOH . H 5 HOH A 123 425 125 HOH HOH . H 5 HOH A 124 426 126 HOH HOH . H 5 HOH A 125 427 127 HOH HOH . H 5 HOH A 126 428 128 HOH HOH . H 5 HOH A 127 429 129 HOH HOH . H 5 HOH A 128 430 130 HOH HOH . H 5 HOH A 129 431 131 HOH HOH . H 5 HOH A 130 432 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 4 -4.181 7.136 10.309 1 34.65 ? C FMT 203 A 1 HETATM 2 O O1 FMT . . . D 4 -4.022 5.973 9.94 1 35.15 ? O1 FMT 203 A 1 HETATM 3 O O2 FMT . . . D 4 -5.074 7.493 11.073 1 34.73 ? O2 FMT 203 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #