data_3G0F # _model_server_result.job_id lFuYDYXo0bFh9_LxRNldcA _model_server_result.datetime_utc '2024-11-27 19:26:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g0f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":9001}' # _entry.id 3G0F # _exptl.entry_id 3G0F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.474 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G0F _cell.length_a 79.462 _cell.length_b 101.783 _cell.length_c 105.505 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G0F _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1,2 A,B,C,D,E,F,G 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 203.566 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C22 H27 F N4 O2' _chem_comp.formula_weight 398.474 _chem_comp.id B49 _chem_comp.mon_nstd_flag . _chem_comp.name 'N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms SUNITINIB # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C14 B49 sing 70 n n C4 H4 B49 sing 71 n n C4 H4A B49 sing 72 n n C4 H4B B49 sing 73 n n C5 C6 B49 doub 74 n y C5 C15 B49 sing 75 n y C5 H5 B49 sing 76 n n C6 C16 B49 sing 77 n y C6 H6 B49 sing 78 n n C7 C15 B49 doub 79 n y C7 C17 B49 sing 80 n y C7 H7 B49 sing 81 n n C13 C3 B49 sing 82 n n C13 C18 B49 doub 83 n y C13 C19 B49 sing 84 n y C15 F29 B49 sing 85 n n C17 C20 B49 sing 86 n n C17 C16 B49 doub 87 n y C20 C21 B49 sing 88 n n C20 C12 B49 doub 89 z n C21 N24 B49 sing 90 n n C21 O27 B49 doub 91 n n C22 C19 B49 sing 92 n n C22 N25 B49 sing 93 n n C22 O28 B49 doub 94 n n C3 H3 B49 sing 95 n n C3 H3A B49 sing 96 n n C3 H3B B49 sing 97 n n C12 C18 B49 sing 98 n n C12 H12 B49 sing 99 n n C14 C19 B49 doub 100 n y C14 N23 B49 sing 101 n y C16 N24 B49 sing 102 n n C18 N23 B49 sing 103 n y N23 HN23 B49 sing 104 n n N24 HN24 B49 sing 105 n n N25 HN25 B49 sing 106 n n N25 C37 B49 sing 107 n n C37 C38 B49 sing 108 n n C38 N4 B49 sing 109 n n N4 C39 B49 sing 110 n n N4 C40 B49 sing 111 n n C40 C41 B49 sing 112 n n C39 C42 B49 sing 113 n n C37 H14 B49 sing 114 n n C37 H15 B49 sing 115 n n C38 H16 B49 sing 116 n n C38 H17 B49 sing 117 n n C39 H18 B49 sing 118 n n C39 H19 B49 sing 119 n n C40 H20 B49 sing 120 n n C40 H21 B49 sing 121 n n C41 H22 B49 sing 122 n n C41 H23 B49 sing 123 n n C41 H24 B49 sing 124 n n C42 H25 B49 sing 125 n n C42 H26 B49 sing 126 n n C42 H27 B49 sing 127 n n # _atom_sites.entry_id 3G0F _atom_sites.fract_transf_matrix[1][1] 0.012585 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009825 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B49 A 1 9001 9001 B49 LIG . D 3 SO4 A 1 1 1 SO4 SO4 . E 2 B49 B 1 9001 9001 B49 LIG . F 4 HOH A 1 2 2 HOH WAT . F 4 HOH A 2 4 4 HOH WAT . F 4 HOH A 3 6 6 HOH WAT . F 4 HOH A 4 10 10 HOH WAT . F 4 HOH A 5 11 11 HOH WAT . F 4 HOH A 6 12 12 HOH WAT . F 4 HOH A 7 15 15 HOH WAT . F 4 HOH A 8 936 1 HOH WAT . G 4 HOH B 1 3 3 HOH WAT . G 4 HOH B 2 5 5 HOH WAT . G 4 HOH B 3 7 7 HOH WAT . G 4 HOH B 4 8 8 HOH WAT . G 4 HOH B 5 9 9 HOH WAT . G 4 HOH B 6 13 13 HOH WAT . G 4 HOH B 7 14 14 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 B49 . . . C 2 -12.557 70.48 -38.384 1 38.4 ? C4 B49 9001 A 1 HETATM 2 C C5 B49 . . . C 2 -17.22 78.912 -37.041 1 28.26 ? C5 B49 9001 A 1 HETATM 3 C C6 B49 . . . C 2 -15.949 78.688 -37.629 1 27.33 ? C6 B49 9001 A 1 HETATM 4 C C7 B49 . . . C 2 -17.461 76.483 -36.545 1 30.43 ? C7 B49 9001 A 1 HETATM 5 C C13 B49 . . . C 2 -15.752 71.336 -36.595 1 41.78 ? C13 B49 9001 A 1 HETATM 6 C C15 B49 . . . C 2 -17.958 77.808 -36.503 1 31.76 ? C15 B49 9001 A 1 HETATM 7 C C17 B49 . . . C 2 -16.207 76.272 -37.131 1 28.81 ? C17 B49 9001 A 1 HETATM 8 C C20 B49 . . . C 2 -15.394 75.075 -37.36 1 31.72 ? C20 B49 9001 A 1 HETATM 9 C C21 B49 . . . C 2 -14.131 75.547 -38.05 1 29.16 ? C21 B49 9001 A 1 HETATM 10 C C22 B49 . . . C 2 -14.904 68.882 -36.682 1 48.48 ? C22 B49 9001 A 1 HETATM 11 C C3 B49 . . . C 2 -17.005 71.109 -35.803 1 45.77 ? C3 B49 9001 A 1 HETATM 12 C C12 B49 . . . C 2 -15.845 73.861 -36.972 1 36.9 ? C12 B49 9001 A 1 HETATM 13 C C14 B49 . . . C 2 -13.806 70.966 -37.709 1 42.01 ? C14 B49 9001 A 1 HETATM 14 C C16 B49 . . . C 2 -15.474 77.362 -37.656 1 29.11 ? C16 B49 9001 A 1 HETATM 15 C C18 B49 . . . C 2 -15.288 72.553 -37.082 1 39.11 ? C18 B49 9001 A 1 HETATM 16 C C19 B49 . . . C 2 -14.808 70.319 -36.989 1 44.01 ? C19 B49 9001 A 1 HETATM 17 N N23 B49 . . . C 2 -14.126 72.302 -37.744 1 37.02 ? N23 B49 9001 A 1 HETATM 18 N N24 B49 . . . C 2 -14.272 76.918 -38.18 1 30.44 ? N24 B49 9001 A 1 HETATM 19 N N25 B49 . . . C 2 -15.265 68.579 -35.37 1 51.67 ? N25 B49 9001 A 1 HETATM 20 O O27 B49 . . . C 2 -13.194 74.889 -38.421 1 30.48 ? O27 B49 9001 A 1 HETATM 21 O O28 B49 . . . C 2 -14.663 68.027 -37.535 1 51.86 ? O28 B49 9001 A 1 HETATM 22 F F29 B49 . . . C 2 -19.147 78.017 -35.944 1 34 ? F29 B49 9001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #