data_3G0F
#
_model_server_result.job_id            k1XQ3kq7SwtZ11PqoC4Xfg 
_model_server_result.datetime_utc      '2024-11-27 19:22:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3g0f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":9001}' 
#
_entry.id    3G0F 
#
_exptl.entry_id    3G0F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.474 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3G0F 
_cell.length_a            79.462 
_cell.length_b            101.783 
_cell.length_c            105.505 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3G0F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 software_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G 1 1,2 
A,B,C,D,E,F,G 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 203.566 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C22 H27 F N4 O2' 
_chem_comp.formula_weight    398.474 
_chem_comp.id                B49 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     SUNITINIB 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C14 B49 sing 70 n n 
C4 H4 B49 sing 71 n n 
C4 H4A B49 sing 72 n n 
C4 H4B B49 sing 73 n n 
C5 C6 B49 doub 74 n y 
C5 C15 B49 sing 75 n y 
C5 H5 B49 sing 76 n n 
C6 C16 B49 sing 77 n y 
C6 H6 B49 sing 78 n n 
C7 C15 B49 doub 79 n y 
C7 C17 B49 sing 80 n y 
C7 H7 B49 sing 81 n n 
C13 C3 B49 sing 82 n n 
C13 C18 B49 doub 83 n y 
C13 C19 B49 sing 84 n y 
C15 F29 B49 sing 85 n n 
C17 C20 B49 sing 86 n n 
C17 C16 B49 doub 87 n y 
C20 C21 B49 sing 88 n n 
C20 C12 B49 doub 89 z n 
C21 N24 B49 sing 90 n n 
C21 O27 B49 doub 91 n n 
C22 C19 B49 sing 92 n n 
C22 N25 B49 sing 93 n n 
C22 O28 B49 doub 94 n n 
C3 H3 B49 sing 95 n n 
C3 H3A B49 sing 96 n n 
C3 H3B B49 sing 97 n n 
C12 C18 B49 sing 98 n n 
C12 H12 B49 sing 99 n n 
C14 C19 B49 doub 100 n y 
C14 N23 B49 sing 101 n y 
C16 N24 B49 sing 102 n n 
C18 N23 B49 sing 103 n y 
N23 HN23 B49 sing 104 n n 
N24 HN24 B49 sing 105 n n 
N25 HN25 B49 sing 106 n n 
N25 C37 B49 sing 107 n n 
C37 C38 B49 sing 108 n n 
C38 N4 B49 sing 109 n n 
N4 C39 B49 sing 110 n n 
N4 C40 B49 sing 111 n n 
C40 C41 B49 sing 112 n n 
C39 C42 B49 sing 113 n n 
C37 H14 B49 sing 114 n n 
C37 H15 B49 sing 115 n n 
C38 H16 B49 sing 116 n n 
C38 H17 B49 sing 117 n n 
C39 H18 B49 sing 118 n n 
C39 H19 B49 sing 119 n n 
C40 H20 B49 sing 120 n n 
C40 H21 B49 sing 121 n n 
C41 H22 B49 sing 122 n n 
C41 H23 B49 sing 123 n n 
C41 H24 B49 sing 124 n n 
C42 H25 B49 sing 125 n n 
C42 H26 B49 sing 126 n n 
C42 H27 B49 sing 127 n n 
#
_atom_sites.entry_id                     3G0F 
_atom_sites.fract_transf_matrix[1][1]    0.012585 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009825 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009478 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 B49 A 1 9001 9001 B49 LIG . 
D 3 SO4 A 1 1 1 SO4 SO4 . 
E 2 B49 B 1 9001 9001 B49 LIG . 
F 4 HOH A 1 2 2 HOH WAT . 
F 4 HOH A 2 4 4 HOH WAT . 
F 4 HOH A 3 6 6 HOH WAT . 
F 4 HOH A 4 10 10 HOH WAT . 
F 4 HOH A 5 11 11 HOH WAT . 
F 4 HOH A 6 12 12 HOH WAT . 
F 4 HOH A 7 15 15 HOH WAT . 
F 4 HOH A 8 936 1 HOH WAT . 
G 4 HOH B 1 3 3 HOH WAT . 
G 4 HOH B 2 5 5 HOH WAT . 
G 4 HOH B 3 7 7 HOH WAT . 
G 4 HOH B 4 8 8 HOH WAT . 
G 4 HOH B 5 9 9 HOH WAT . 
G 4 HOH B 6 13 13 HOH WAT . 
G 4 HOH B 7 14 14 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 B49 . . . E 2 -17.737 130.068 -17.009 1 41.23 ? C4 B49 9001 B 1 
HETATM 2 C C5 B49 . . . E 2 -20.489 120.918 -18.528 1 35.26 ? C5 B49 9001 B 1 
HETATM 3 C C6 B49 . . . E 2 -19.345 121.408 -17.851 1 35.34 ? C6 B49 9001 B 1 
HETATM 4 C C7 B49 . . . E 2 -21.173 123.226 -19.158 1 36.4 ? C7 B49 9001 B 1 
HETATM 5 C C13 B49 . . . E 2 -20.413 128.632 -19.218 1 40.95 ? C13 B49 9001 B 1 
HETATM 6 C C15 B49 . . . E 2 -21.383 121.825 -19.173 1 36.67 ? C15 B49 9001 B 1 
HETATM 7 C C17 B49 . . . E 2 -20.036 123.711 -18.48 1 35.16 ? C17 B49 9001 B 1 
HETATM 8 C C20 B49 . . . E 2 -19.501 125.058 -18.243 1 35 ? C20 B49 9001 B 1 
HETATM 9 C C21 B49 . . . E 2 -18.239 124.88 -17.433 1 34.79 ? C21 B49 9001 B 1 
HETATM 10 C C22 B49 . . . E 2 -20.033 131.208 -19.125 1 45.96 ? C22 B49 9001 B 1 
HETATM 11 C C3 B49 . . . E 2 -21.54 128.607 -20.205 1 42.02 ? C3 B49 9001 B 1 
HETATM 12 C C12 B49 . . . E 2 -20.136 126.144 -18.716 1 37.82 ? C12 B49 9001 B 1 
HETATM 13 C C14 B49 . . . E 2 -18.761 129.37 -17.839 1 41.94 ? C14 B49 9001 B 1 
HETATM 14 C C16 B49 . . . E 2 -19.143 122.805 -17.844 1 34.33 ? C16 B49 9001 B 1 
HETATM 15 C C18 B49 . . . E 2 -19.836 127.533 -18.602 1 38.6 ? C18 B49 9001 B 1 
HETATM 16 C C19 B49 . . . E 2 -19.732 129.816 -18.731 1 43.13 ? C19 B49 9001 B 1 
HETATM 17 N N23 B49 . . . E 2 -18.853 128.004 -17.786 1 38.48 ? N23 B49 9001 B 1 
HETATM 18 N N24 B49 . . . E 2 -18.106 123.494 -17.245 1 31.85 ? N24 B49 9001 B 1 
HETATM 19 N N25 B49 . . . E 2 -20.035 132.126 -18.096 1 43.75 ? N25 B49 9001 B 1 
HETATM 20 O O27 B49 . . . E 2 -17.49 125.751 -17.023 1 35.58 ? O27 B49 9001 B 1 
HETATM 21 O O28 B49 . . . E 2 -20.265 131.508 -20.304 1 51.45 ? O28 B49 9001 B 1 
HETATM 22 F F29 B49 . . . E 2 -22.453 121.347 -19.812 1 40.6 ? F29 B49 9001 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           22 
#