data_3G0U # _model_server_result.job_id '_melLknUwncATSimasyanQ' _model_server_result.datetime_utc '2024-11-26 04:40:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3G0U # _exptl.entry_id 3G0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3G0U _cell.length_a 90.752 _cell.length_b 90.752 _cell.length_c 122.799 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 318 n y N1 C6 ORO sing 319 n y N1 HN1 ORO sing 320 n n C2 O2 ORO doub 321 n n C2 N3 ORO sing 322 n y N3 C4 ORO sing 323 n y N3 HN3 ORO sing 324 n n C4 O4 ORO doub 325 n n C4 C5 ORO sing 326 n y C5 C6 ORO doub 327 n y C5 H5 ORO sing 328 n n C6 C7 ORO sing 329 n n C7 O71 ORO doub 330 n n C7 O72 ORO sing 331 n n O72 HO7 ORO sing 332 n n # _atom_sites.entry_id 3G0U _atom_sites.fract_transf_matrix[1][1] 0.011019 _atom_sites.fract_transf_matrix[1][2] 0.006362 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ORO A 1 1 1 ORO ORO . C 3 FMN A 1 398 398 FMN FMN . D 4 MDY A 1 2 2 MDY DRG . E 5 HOH A 1 3 3 HOH HOH . E 5 HOH A 2 4 4 HOH HOH . E 5 HOH A 3 5 5 HOH HOH . E 5 HOH A 4 6 6 HOH HOH . E 5 HOH A 5 7 7 HOH HOH . E 5 HOH A 6 8 8 HOH HOH . E 5 HOH A 7 9 9 HOH HOH . E 5 HOH A 8 10 10 HOH HOH . E 5 HOH A 9 11 11 HOH HOH . E 5 HOH A 10 12 12 HOH HOH . E 5 HOH A 11 13 13 HOH HOH . E 5 HOH A 12 14 14 HOH HOH . E 5 HOH A 13 15 15 HOH HOH . E 5 HOH A 14 16 16 HOH HOH . E 5 HOH A 15 17 17 HOH HOH . E 5 HOH A 16 19 19 HOH HOH . E 5 HOH A 17 20 20 HOH HOH . E 5 HOH A 18 21 21 HOH HOH . E 5 HOH A 19 22 22 HOH HOH . E 5 HOH A 20 23 23 HOH HOH . E 5 HOH A 21 24 24 HOH HOH . E 5 HOH A 22 25 25 HOH HOH . E 5 HOH A 23 26 26 HOH HOH . E 5 HOH A 24 27 27 HOH HOH . E 5 HOH A 25 28 28 HOH HOH . E 5 HOH A 26 29 29 HOH HOH . E 5 HOH A 27 397 1 HOH HOH . E 5 HOH A 28 399 2 HOH HOH . E 5 HOH A 29 400 30 HOH HOH . E 5 HOH A 30 401 31 HOH HOH . E 5 HOH A 31 402 32 HOH HOH . E 5 HOH A 32 403 33 HOH HOH . E 5 HOH A 33 404 34 HOH HOH . E 5 HOH A 34 405 35 HOH HOH . E 5 HOH A 35 406 36 HOH HOH . E 5 HOH A 36 407 37 HOH HOH . E 5 HOH A 37 408 38 HOH HOH . E 5 HOH A 38 409 39 HOH HOH . E 5 HOH A 39 410 41 HOH HOH . E 5 HOH A 40 411 42 HOH HOH . E 5 HOH A 41 412 43 HOH HOH . E 5 HOH A 42 413 44 HOH HOH . E 5 HOH A 43 414 45 HOH HOH . E 5 HOH A 44 415 46 HOH HOH . E 5 HOH A 45 416 47 HOH HOH . E 5 HOH A 46 417 48 HOH HOH . E 5 HOH A 47 418 49 HOH HOH . E 5 HOH A 48 419 50 HOH HOH . E 5 HOH A 49 420 51 HOH HOH . E 5 HOH A 50 421 52 HOH HOH . E 5 HOH A 51 422 53 HOH HOH . E 5 HOH A 52 423 54 HOH HOH . E 5 HOH A 53 424 55 HOH HOH . E 5 HOH A 54 425 56 HOH HOH . E 5 HOH A 55 426 57 HOH HOH . E 5 HOH A 56 427 58 HOH HOH . E 5 HOH A 57 428 59 HOH HOH . E 5 HOH A 58 429 60 HOH HOH . E 5 HOH A 59 430 61 HOH HOH . E 5 HOH A 60 431 62 HOH HOH . E 5 HOH A 61 432 63 HOH HOH . E 5 HOH A 62 433 64 HOH HOH . E 5 HOH A 63 434 65 HOH HOH . E 5 HOH A 64 435 66 HOH HOH . E 5 HOH A 65 436 67 HOH HOH . E 5 HOH A 66 437 68 HOH HOH . E 5 HOH A 67 438 69 HOH HOH . E 5 HOH A 68 439 70 HOH HOH . E 5 HOH A 69 440 71 HOH HOH . E 5 HOH A 70 441 72 HOH HOH . E 5 HOH A 71 442 73 HOH HOH . E 5 HOH A 72 443 74 HOH HOH . E 5 HOH A 73 444 75 HOH HOH . E 5 HOH A 74 445 76 HOH HOH . E 5 HOH A 75 446 77 HOH HOH . E 5 HOH A 76 447 78 HOH HOH . E 5 HOH A 77 448 79 HOH HOH . E 5 HOH A 78 449 80 HOH HOH . E 5 HOH A 79 450 81 HOH HOH . E 5 HOH A 80 451 82 HOH HOH . E 5 HOH A 81 452 83 HOH HOH . E 5 HOH A 82 453 84 HOH HOH . E 5 HOH A 83 454 85 HOH HOH . E 5 HOH A 84 455 86 HOH HOH . E 5 HOH A 85 456 87 HOH HOH . E 5 HOH A 86 457 88 HOH HOH . E 5 HOH A 87 458 89 HOH HOH . E 5 HOH A 88 459 90 HOH HOH . E 5 HOH A 89 460 91 HOH HOH . E 5 HOH A 90 461 92 HOH HOH . E 5 HOH A 91 462 93 HOH HOH . E 5 HOH A 92 463 94 HOH HOH . E 5 HOH A 93 464 95 HOH HOH . E 5 HOH A 94 465 96 HOH HOH . E 5 HOH A 95 466 97 HOH HOH . E 5 HOH A 96 467 98 HOH HOH . E 5 HOH A 97 468 99 HOH HOH . E 5 HOH A 98 469 100 HOH HOH . E 5 HOH A 99 470 101 HOH HOH . E 5 HOH A 100 471 102 HOH HOH . E 5 HOH A 101 472 103 HOH HOH . E 5 HOH A 102 473 104 HOH HOH . E 5 HOH A 103 474 105 HOH HOH . E 5 HOH A 104 475 106 HOH HOH . E 5 HOH A 105 476 107 HOH HOH . E 5 HOH A 106 477 108 HOH HOH . E 5 HOH A 107 478 109 HOH HOH . E 5 HOH A 108 479 110 HOH HOH . E 5 HOH A 109 480 111 HOH HOH . E 5 HOH A 110 481 112 HOH HOH . E 5 HOH A 111 482 113 HOH HOH . E 5 HOH A 112 483 114 HOH HOH . E 5 HOH A 113 484 115 HOH HOH . E 5 HOH A 114 485 116 HOH HOH . E 5 HOH A 115 486 119 HOH HOH . E 5 HOH A 116 487 120 HOH HOH . E 5 HOH A 117 488 121 HOH HOH . E 5 HOH A 118 489 122 HOH HOH . E 5 HOH A 119 490 123 HOH HOH . E 5 HOH A 120 491 124 HOH HOH . E 5 HOH A 121 492 125 HOH HOH . E 5 HOH A 122 493 127 HOH HOH . E 5 HOH A 123 494 128 HOH HOH . E 5 HOH A 124 495 129 HOH HOH . E 5 HOH A 125 496 130 HOH HOH . E 5 HOH A 126 497 131 HOH HOH . E 5 HOH A 127 498 133 HOH HOH . E 5 HOH A 128 499 134 HOH HOH . E 5 HOH A 129 500 135 HOH HOH . E 5 HOH A 130 501 136 HOH HOH . E 5 HOH A 131 502 137 HOH HOH . E 5 HOH A 132 503 138 HOH HOH . E 5 HOH A 133 504 139 HOH HOH . E 5 HOH A 134 505 140 HOH HOH . E 5 HOH A 135 506 141 HOH HOH . E 5 HOH A 136 507 142 HOH HOH . E 5 HOH A 137 508 143 HOH HOH . E 5 HOH A 138 509 144 HOH HOH . E 5 HOH A 139 510 145 HOH HOH . E 5 HOH A 140 511 146 HOH HOH . E 5 HOH A 141 512 147 HOH HOH . E 5 HOH A 142 513 149 HOH HOH . E 5 HOH A 143 514 150 HOH HOH . E 5 HOH A 144 515 151 HOH HOH . E 5 HOH A 145 516 152 HOH HOH . E 5 HOH A 146 517 153 HOH HOH . E 5 HOH A 147 518 154 HOH HOH . E 5 HOH A 148 519 155 HOH HOH . E 5 HOH A 149 520 156 HOH HOH . E 5 HOH A 150 521 158 HOH HOH . E 5 HOH A 151 522 160 HOH HOH . E 5 HOH A 152 523 161 HOH HOH . E 5 HOH A 153 524 162 HOH HOH . E 5 HOH A 154 525 163 HOH HOH . E 5 HOH A 155 526 164 HOH HOH . E 5 HOH A 156 527 165 HOH HOH . E 5 HOH A 157 528 166 HOH HOH . E 5 HOH A 158 529 167 HOH HOH . E 5 HOH A 159 530 168 HOH HOH . E 5 HOH A 160 531 169 HOH HOH . E 5 HOH A 161 532 170 HOH HOH . E 5 HOH A 162 533 171 HOH HOH . E 5 HOH A 163 534 172 HOH HOH . E 5 HOH A 164 535 173 HOH HOH . E 5 HOH A 165 536 175 HOH HOH . E 5 HOH A 166 537 178 HOH HOH . E 5 HOH A 167 538 179 HOH HOH . E 5 HOH A 168 539 180 HOH HOH . E 5 HOH A 169 540 181 HOH HOH . E 5 HOH A 170 541 182 HOH HOH . E 5 HOH A 171 542 184 HOH HOH . E 5 HOH A 172 543 185 HOH HOH . E 5 HOH A 173 544 186 HOH HOH . E 5 HOH A 174 545 187 HOH HOH . E 5 HOH A 175 546 188 HOH HOH . E 5 HOH A 176 547 189 HOH HOH . E 5 HOH A 177 548 190 HOH HOH . E 5 HOH A 178 549 191 HOH HOH . E 5 HOH A 179 550 192 HOH HOH . E 5 HOH A 180 551 193 HOH HOH . E 5 HOH A 181 552 195 HOH HOH . E 5 HOH A 182 553 196 HOH HOH . E 5 HOH A 183 554 197 HOH HOH . E 5 HOH A 184 555 199 HOH HOH . E 5 HOH A 185 556 200 HOH HOH . E 5 HOH A 186 557 201 HOH HOH . E 5 HOH A 187 558 202 HOH HOH . E 5 HOH A 188 559 203 HOH HOH . E 5 HOH A 189 560 204 HOH HOH . E 5 HOH A 190 561 205 HOH HOH . E 5 HOH A 191 562 209 HOH HOH . E 5 HOH A 192 563 210 HOH HOH . E 5 HOH A 193 564 211 HOH HOH . E 5 HOH A 194 565 214 HOH HOH . E 5 HOH A 195 566 216 HOH HOH . E 5 HOH A 196 567 217 HOH HOH . E 5 HOH A 197 568 218 HOH HOH . E 5 HOH A 198 569 221 HOH HOH . E 5 HOH A 199 570 222 HOH HOH . E 5 HOH A 200 571 223 HOH HOH . E 5 HOH A 201 572 224 HOH HOH . E 5 HOH A 202 573 225 HOH HOH . E 5 HOH A 203 574 226 HOH HOH . E 5 HOH A 204 575 227 HOH HOH . E 5 HOH A 205 576 228 HOH HOH . E 5 HOH A 206 577 229 HOH HOH . E 5 HOH A 207 578 230 HOH HOH . E 5 HOH A 208 579 231 HOH HOH . E 5 HOH A 209 580 234 HOH HOH . E 5 HOH A 210 581 235 HOH HOH . E 5 HOH A 211 582 236 HOH HOH . E 5 HOH A 212 583 237 HOH HOH . E 5 HOH A 213 584 238 HOH HOH . E 5 HOH A 214 585 239 HOH HOH . E 5 HOH A 215 586 240 HOH HOH . E 5 HOH A 216 587 241 HOH HOH . E 5 HOH A 217 588 242 HOH HOH . E 5 HOH A 218 589 243 HOH HOH . E 5 HOH A 219 590 244 HOH HOH . E 5 HOH A 220 591 245 HOH HOH . E 5 HOH A 221 592 246 HOH HOH . E 5 HOH A 222 593 247 HOH HOH . E 5 HOH A 223 594 248 HOH HOH . E 5 HOH A 224 595 249 HOH HOH . E 5 HOH A 225 596 250 HOH HOH . E 5 HOH A 226 597 251 HOH HOH . E 5 HOH A 227 598 252 HOH HOH . E 5 HOH A 228 599 253 HOH HOH . E 5 HOH A 229 600 254 HOH HOH . E 5 HOH A 230 601 255 HOH HOH . E 5 HOH A 231 602 256 HOH HOH . E 5 HOH A 232 603 258 HOH HOH . E 5 HOH A 233 604 259 HOH HOH . E 5 HOH A 234 605 260 HOH HOH . E 5 HOH A 235 606 262 HOH HOH . E 5 HOH A 236 607 263 HOH HOH . E 5 HOH A 237 608 264 HOH HOH . E 5 HOH A 238 609 266 HOH HOH . E 5 HOH A 239 610 267 HOH HOH . E 5 HOH A 240 611 268 HOH HOH . E 5 HOH A 241 612 269 HOH HOH . E 5 HOH A 242 613 270 HOH HOH . E 5 HOH A 243 614 271 HOH HOH . E 5 HOH A 244 615 272 HOH HOH . E 5 HOH A 245 616 273 HOH HOH . E 5 HOH A 246 617 274 HOH HOH . E 5 HOH A 247 618 275 HOH HOH . E 5 HOH A 248 619 276 HOH HOH . E 5 HOH A 249 620 277 HOH HOH . E 5 HOH A 250 621 278 HOH HOH . E 5 HOH A 251 622 279 HOH HOH . E 5 HOH A 252 623 280 HOH HOH . E 5 HOH A 253 624 281 HOH HOH . E 5 HOH A 254 625 282 HOH HOH . E 5 HOH A 255 626 283 HOH HOH . E 5 HOH A 256 627 284 HOH HOH . E 5 HOH A 257 628 285 HOH HOH . E 5 HOH A 258 629 286 HOH HOH . E 5 HOH A 259 630 287 HOH HOH . E 5 HOH A 260 631 288 HOH HOH . E 5 HOH A 261 632 289 HOH HOH . E 5 HOH A 262 633 290 HOH HOH . E 5 HOH A 263 634 291 HOH HOH . E 5 HOH A 264 635 292 HOH HOH . E 5 HOH A 265 636 293 HOH HOH . E 5 HOH A 266 637 294 HOH HOH . E 5 HOH A 267 638 295 HOH HOH . E 5 HOH A 268 639 296 HOH HOH . E 5 HOH A 269 640 297 HOH HOH . E 5 HOH A 270 641 298 HOH HOH . E 5 HOH A 271 642 299 HOH HOH . E 5 HOH A 272 643 300 HOH HOH . E 5 HOH A 273 644 301 HOH HOH . E 5 HOH A 274 645 302 HOH HOH . E 5 HOH A 275 646 303 HOH HOH . E 5 HOH A 276 647 304 HOH HOH . E 5 HOH A 277 648 305 HOH HOH . E 5 HOH A 278 649 306 HOH HOH . E 5 HOH A 279 650 307 HOH HOH . E 5 HOH A 280 651 308 HOH HOH . E 5 HOH A 281 652 309 HOH HOH . E 5 HOH A 282 653 310 HOH HOH . E 5 HOH A 283 654 311 HOH HOH . E 5 HOH A 284 655 312 HOH HOH . E 5 HOH A 285 656 313 HOH HOH . E 5 HOH A 286 657 314 HOH HOH . E 5 HOH A 287 658 315 HOH HOH . E 5 HOH A 288 659 316 HOH HOH . E 5 HOH A 289 660 317 HOH HOH . E 5 HOH A 290 661 318 HOH HOH . E 5 HOH A 291 662 319 HOH HOH . E 5 HOH A 292 663 320 HOH HOH . E 5 HOH A 293 664 321 HOH HOH . E 5 HOH A 294 665 322 HOH HOH . E 5 HOH A 295 666 323 HOH HOH . E 5 HOH A 296 667 324 HOH HOH . E 5 HOH A 297 668 325 HOH HOH . E 5 HOH A 298 669 326 HOH HOH . E 5 HOH A 299 670 327 HOH HOH . E 5 HOH A 300 671 328 HOH HOH . E 5 HOH A 301 672 329 HOH HOH . E 5 HOH A 302 673 330 HOH HOH . E 5 HOH A 303 674 331 HOH HOH . E 5 HOH A 304 675 332 HOH HOH . E 5 HOH A 305 676 333 HOH HOH . E 5 HOH A 306 677 334 HOH HOH . E 5 HOH A 307 678 335 HOH HOH . E 5 HOH A 308 679 336 HOH HOH . E 5 HOH A 309 680 337 HOH HOH . E 5 HOH A 310 681 338 HOH HOH . E 5 HOH A 311 682 339 HOH HOH . E 5 HOH A 312 683 340 HOH HOH . E 5 HOH A 313 684 341 HOH HOH . E 5 HOH A 314 685 342 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . B 2 38.743 26.117 -7.206 1 10.16 ? N1 ORO 1 A 1 HETATM 2 C C2 ORO . . . B 2 37.422 26.523 -7.538 1 6.49 ? C2 ORO 1 A 1 HETATM 3 O O2 ORO . . . B 2 37.066 26.753 -8.729 1 5.45 ? O2 ORO 1 A 1 HETATM 4 N N3 ORO . . . B 2 36.5 26.759 -6.627 1 3.49 ? N3 ORO 1 A 1 HETATM 5 C C4 ORO . . . B 2 36.752 26.579 -5.306 1 8.13 ? C4 ORO 1 A 1 HETATM 6 O O4 ORO . . . B 2 35.852 26.732 -4.43 1 6.58 ? O4 ORO 1 A 1 HETATM 7 C C5 ORO . . . B 2 37.997 26.166 -4.923 1 3.97 ? C5 ORO 1 A 1 HETATM 8 C C6 ORO . . . B 2 38.969 25.916 -5.852 1 7.07 ? C6 ORO 1 A 1 HETATM 9 C C7 ORO . . . B 2 40.319 25.562 -5.303 1 12.15 ? C7 ORO 1 A 1 HETATM 10 O O71 ORO . . . B 2 40.74 26.224 -4.311 1 9.99 ? O71 ORO 1 A 1 HETATM 11 O O72 ORO . . . B 2 41.051 24.781 -5.916 1 10.26 ? O72 ORO 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #