data_3G2H # _model_server_result.job_id EAeX35yjB6IYL87SlhBRtw _model_server_result.datetime_utc '2024-10-13 13:18:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":998}' # _entry.id 3G2H # _exptl.entry_id 3G2H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-beta-D-glucopyranosyl-4-phenyl-1H-1,2,3-triazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G2H _cell.length_a 127.287 _cell.length_b 127.287 _cell.length_c 115.615 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 115.615 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 679 A MET 679 1_555 A N LLP 680 A LLP 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C LLP 680 A LLP 680 1_555 A N PHE 681 A PHE 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C14 H17 N3 O5' _chem_comp.formula_weight 307.302 _chem_comp.id KOT _chem_comp.mon_nstd_flag . _chem_comp.name 1-beta-D-glucopyranosyl-4-phenyl-1H-1,2,3-triazole _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 1-beta-D-glucosyl-4-phenyl-1H-1,2,3-triazole;1-D-glucosyl-4-phenyl-1H-1,2,3-triazole;1-glucosyl-4-phenyl-1H-1,2,3-triazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C9 KOT doub 220 n y C14 C13 KOT sing 221 n y C14 H14 KOT sing 222 n n C13 C12 KOT doub 223 n y C13 H13 KOT sing 224 n n C12 C11 KOT sing 225 n y C12 H12 KOT sing 226 n n C10 C11 KOT doub 227 n y C11 H11 KOT sing 228 n n C9 C10 KOT sing 229 n y C10 H10 KOT sing 230 n n C8 C9 KOT sing 231 n y C7 C8 KOT doub 232 n y C8 N3 KOT sing 233 n y N1 C7 KOT sing 234 n y C7 H7 KOT sing 235 n n N2 N3 KOT doub 236 n y N1 N2 KOT sing 237 n y C1 N1 KOT sing 238 n n C2 C1 KOT sing 239 n n C1 O5 KOT sing 240 n n C1 H1 KOT sing 241 n n C5 O5 KOT sing 242 n n C4 C5 KOT sing 243 n n C5 C6 KOT sing 244 n n C5 H5 KOT sing 245 n n O6 C6 KOT sing 246 n n C6 H61 KOT sing 247 n n C6 H62 KOT sing 248 n n O6 HO6 KOT sing 249 n n O4 C4 KOT sing 250 n n C3 C4 KOT sing 251 n n C4 H4 KOT sing 252 n n O4 HO4 KOT sing 253 n n O3 C3 KOT sing 254 n n C3 C2 KOT sing 255 n n C3 H3 KOT sing 256 n n O3 HO3 KOT sing 257 n n O2 C2 KOT sing 258 n n C2 H2 KOT sing 259 n n O2 HO2 KOT sing 260 n n # _atom_sites.entry_id 3G2H _atom_sites.fract_transf_matrix[1][1] 0.007856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008649 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KOT A 1 998 998 KOT KOT . C 3 DMS A 1 931 931 DMS DMS . D 4 IMP A 1 930 930 IMP IMP . E 5 HOH A 1 843 1 HOH HOH . E 5 HOH A 2 844 2 HOH HOH . E 5 HOH A 3 845 3 HOH HOH . E 5 HOH A 4 846 4 HOH HOH . E 5 HOH A 5 847 5 HOH HOH . E 5 HOH A 6 848 6 HOH HOH . E 5 HOH A 7 849 7 HOH HOH . E 5 HOH A 8 850 8 HOH HOH . E 5 HOH A 9 851 9 HOH HOH . E 5 HOH A 10 852 10 HOH HOH . E 5 HOH A 11 853 11 HOH HOH . E 5 HOH A 12 854 12 HOH HOH . E 5 HOH A 13 855 13 HOH HOH . E 5 HOH A 14 856 14 HOH HOH . E 5 HOH A 15 857 15 HOH HOH . E 5 HOH A 16 858 16 HOH HOH . E 5 HOH A 17 859 17 HOH HOH . E 5 HOH A 18 860 18 HOH HOH . E 5 HOH A 19 861 19 HOH HOH . E 5 HOH A 20 862 20 HOH HOH . E 5 HOH A 21 863 21 HOH HOH . E 5 HOH A 22 864 22 HOH HOH . E 5 HOH A 23 865 23 HOH HOH . E 5 HOH A 24 866 24 HOH HOH . E 5 HOH A 25 867 25 HOH HOH . E 5 HOH A 26 868 26 HOH HOH . E 5 HOH A 27 869 27 HOH HOH . E 5 HOH A 28 870 28 HOH HOH . E 5 HOH A 29 871 29 HOH HOH . E 5 HOH A 30 872 30 HOH HOH . E 5 HOH A 31 873 31 HOH HOH . E 5 HOH A 32 874 32 HOH HOH . E 5 HOH A 33 875 33 HOH HOH . E 5 HOH A 34 876 34 HOH HOH . E 5 HOH A 35 877 35 HOH HOH . E 5 HOH A 36 878 36 HOH HOH . E 5 HOH A 37 879 37 HOH HOH . E 5 HOH A 38 880 38 HOH HOH . E 5 HOH A 39 881 39 HOH HOH . E 5 HOH A 40 882 40 HOH HOH . E 5 HOH A 41 883 41 HOH HOH . E 5 HOH A 42 884 42 HOH HOH . E 5 HOH A 43 885 43 HOH HOH . E 5 HOH A 44 886 44 HOH HOH . E 5 HOH A 45 887 45 HOH HOH . E 5 HOH A 46 888 46 HOH HOH . E 5 HOH A 47 889 47 HOH HOH . E 5 HOH A 48 890 48 HOH HOH . E 5 HOH A 49 891 49 HOH HOH . E 5 HOH A 50 892 50 HOH HOH . E 5 HOH A 51 893 51 HOH HOH . E 5 HOH A 52 894 52 HOH HOH . E 5 HOH A 53 895 53 HOH HOH . E 5 HOH A 54 896 54 HOH HOH . E 5 HOH A 55 897 55 HOH HOH . E 5 HOH A 56 898 56 HOH HOH . E 5 HOH A 57 899 57 HOH HOH . E 5 HOH A 58 900 58 HOH HOH . E 5 HOH A 59 901 59 HOH HOH . E 5 HOH A 60 902 60 HOH HOH . E 5 HOH A 61 903 61 HOH HOH . E 5 HOH A 62 904 62 HOH HOH . E 5 HOH A 63 905 63 HOH HOH . E 5 HOH A 64 906 64 HOH HOH . E 5 HOH A 65 907 65 HOH HOH . E 5 HOH A 66 908 66 HOH HOH . E 5 HOH A 67 909 67 HOH HOH . E 5 HOH A 68 910 68 HOH HOH . E 5 HOH A 69 911 69 HOH HOH . E 5 HOH A 70 912 70 HOH HOH . E 5 HOH A 71 913 71 HOH HOH . E 5 HOH A 72 914 72 HOH HOH . E 5 HOH A 73 915 73 HOH HOH . E 5 HOH A 74 916 74 HOH HOH . E 5 HOH A 75 917 75 HOH HOH . E 5 HOH A 76 918 76 HOH HOH . E 5 HOH A 77 919 77 HOH HOH . E 5 HOH A 78 920 78 HOH HOH . E 5 HOH A 79 921 79 HOH HOH . E 5 HOH A 80 922 80 HOH HOH . E 5 HOH A 81 923 81 HOH HOH . E 5 HOH A 82 924 82 HOH HOH . E 5 HOH A 83 925 83 HOH HOH . E 5 HOH A 84 926 84 HOH HOH . E 5 HOH A 85 927 85 HOH HOH . E 5 HOH A 86 928 86 HOH HOH . E 5 HOH A 87 929 87 HOH HOH . E 5 HOH A 88 932 88 HOH HOH . E 5 HOH A 89 933 89 HOH HOH . E 5 HOH A 90 934 90 HOH HOH . E 5 HOH A 91 935 91 HOH HOH . E 5 HOH A 92 936 92 HOH HOH . E 5 HOH A 93 937 93 HOH HOH . E 5 HOH A 94 938 94 HOH HOH . E 5 HOH A 95 939 95 HOH HOH . E 5 HOH A 96 940 96 HOH HOH . E 5 HOH A 97 941 97 HOH HOH . E 5 HOH A 98 942 98 HOH HOH . E 5 HOH A 99 943 99 HOH HOH . E 5 HOH A 100 944 100 HOH HOH . E 5 HOH A 101 945 101 HOH HOH . E 5 HOH A 102 946 102 HOH HOH . E 5 HOH A 103 947 103 HOH HOH . E 5 HOH A 104 948 104 HOH HOH . E 5 HOH A 105 949 105 HOH HOH . E 5 HOH A 106 950 106 HOH HOH . E 5 HOH A 107 951 107 HOH HOH . E 5 HOH A 108 952 108 HOH HOH . E 5 HOH A 109 953 109 HOH HOH . E 5 HOH A 110 954 110 HOH HOH . E 5 HOH A 111 955 111 HOH HOH . E 5 HOH A 112 956 112 HOH HOH . E 5 HOH A 113 957 113 HOH HOH . E 5 HOH A 114 958 114 HOH HOH . E 5 HOH A 115 959 115 HOH HOH . E 5 HOH A 116 960 116 HOH HOH . E 5 HOH A 117 961 117 HOH HOH . E 5 HOH A 118 962 118 HOH HOH . E 5 HOH A 119 963 119 HOH HOH . E 5 HOH A 120 964 120 HOH HOH . E 5 HOH A 121 965 121 HOH HOH . E 5 HOH A 122 966 122 HOH HOH . E 5 HOH A 123 967 123 HOH HOH . E 5 HOH A 124 968 124 HOH HOH . E 5 HOH A 125 969 125 HOH HOH . E 5 HOH A 126 970 126 HOH HOH . E 5 HOH A 127 971 127 HOH HOH . E 5 HOH A 128 972 128 HOH HOH . E 5 HOH A 129 973 129 HOH HOH . E 5 HOH A 130 974 130 HOH HOH . E 5 HOH A 131 975 131 HOH HOH . E 5 HOH A 132 976 132 HOH HOH . E 5 HOH A 133 977 133 HOH HOH . E 5 HOH A 134 978 134 HOH HOH . E 5 HOH A 135 979 135 HOH HOH . E 5 HOH A 136 980 136 HOH HOH . E 5 HOH A 137 981 137 HOH HOH . E 5 HOH A 138 982 138 HOH HOH . E 5 HOH A 139 983 139 HOH HOH . E 5 HOH A 140 984 140 HOH HOH . E 5 HOH A 141 985 141 HOH HOH . E 5 HOH A 142 986 142 HOH HOH . E 5 HOH A 143 987 143 HOH HOH . E 5 HOH A 144 988 144 HOH HOH . E 5 HOH A 145 989 145 HOH HOH . E 5 HOH A 146 990 146 HOH HOH . E 5 HOH A 147 991 147 HOH HOH . E 5 HOH A 148 992 148 HOH HOH . E 5 HOH A 149 993 149 HOH HOH . E 5 HOH A 150 994 150 HOH HOH . E 5 HOH A 151 995 151 HOH HOH . E 5 HOH A 152 996 152 HOH HOH . E 5 HOH A 153 997 153 HOH HOH . E 5 HOH A 154 999 154 HOH HOH . E 5 HOH A 155 1000 155 HOH HOH . E 5 HOH A 156 1001 156 HOH HOH . E 5 HOH A 157 1002 157 HOH HOH . E 5 HOH A 158 1003 158 HOH HOH . E 5 HOH A 159 1004 159 HOH HOH . E 5 HOH A 160 1005 160 HOH HOH . E 5 HOH A 161 1006 161 HOH HOH . E 5 HOH A 162 1007 162 HOH HOH . E 5 HOH A 163 1008 163 HOH HOH . E 5 HOH A 164 1009 164 HOH HOH . E 5 HOH A 165 1010 165 HOH HOH . E 5 HOH A 166 1011 166 HOH HOH . E 5 HOH A 167 1012 167 HOH HOH . E 5 HOH A 168 1013 168 HOH HOH . E 5 HOH A 169 1014 169 HOH HOH . E 5 HOH A 170 1015 170 HOH HOH . E 5 HOH A 171 1016 171 HOH HOH . E 5 HOH A 172 1017 172 HOH HOH . E 5 HOH A 173 1018 173 HOH HOH . E 5 HOH A 174 1019 174 HOH HOH . E 5 HOH A 175 1020 175 HOH HOH . E 5 HOH A 176 1021 176 HOH HOH . E 5 HOH A 177 1022 177 HOH HOH . E 5 HOH A 178 1023 178 HOH HOH . E 5 HOH A 179 1024 179 HOH HOH . E 5 HOH A 180 1025 180 HOH HOH . E 5 HOH A 181 1026 181 HOH HOH . E 5 HOH A 182 1027 182 HOH HOH . E 5 HOH A 183 1028 183 HOH HOH . E 5 HOH A 184 1029 184 HOH HOH . E 5 HOH A 185 1030 185 HOH HOH . E 5 HOH A 186 1031 186 HOH HOH . E 5 HOH A 187 1032 187 HOH HOH . E 5 HOH A 188 1033 188 HOH HOH . E 5 HOH A 189 1034 189 HOH HOH . E 5 HOH A 190 1035 190 HOH HOH . E 5 HOH A 191 1036 191 HOH HOH . E 5 HOH A 192 1037 192 HOH HOH . E 5 HOH A 193 1038 193 HOH HOH . E 5 HOH A 194 1039 194 HOH HOH . E 5 HOH A 195 1040 195 HOH HOH . E 5 HOH A 196 1041 196 HOH HOH . E 5 HOH A 197 1042 197 HOH HOH . E 5 HOH A 198 1043 198 HOH HOH . E 5 HOH A 199 1044 199 HOH HOH . E 5 HOH A 200 1045 200 HOH HOH . E 5 HOH A 201 1046 201 HOH HOH . E 5 HOH A 202 1047 202 HOH HOH . E 5 HOH A 203 1048 203 HOH HOH . E 5 HOH A 204 1049 204 HOH HOH . E 5 HOH A 205 1050 205 HOH HOH . E 5 HOH A 206 1051 206 HOH HOH . E 5 HOH A 207 1052 207 HOH HOH . E 5 HOH A 208 1053 208 HOH HOH . E 5 HOH A 209 1054 209 HOH HOH . E 5 HOH A 210 1055 210 HOH HOH . E 5 HOH A 211 1056 211 HOH HOH . E 5 HOH A 212 1057 212 HOH HOH . E 5 HOH A 213 1058 213 HOH HOH . E 5 HOH A 214 1059 214 HOH HOH . E 5 HOH A 215 1060 215 HOH HOH . E 5 HOH A 216 1061 216 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 KOT . . . B 2 37.357 23.539 30.435 1 31.42 ? C14 KOT 998 A 1 HETATM 2 C C13 KOT . . . B 2 38.577 23.862 31.031 1 32.7 ? C13 KOT 998 A 1 HETATM 3 C C12 KOT . . . B 2 38.673 24.976 31.862 1 31.55 ? C12 KOT 998 A 1 HETATM 4 C C11 KOT . . . B 2 37.559 25.771 32.104 1 32.98 ? C11 KOT 998 A 1 HETATM 5 C C10 KOT . . . B 2 36.339 25.452 31.503 1 33.17 ? C10 KOT 998 A 1 HETATM 6 C C9 KOT . . . B 2 36.239 24.333 30.669 1 30.52 ? C9 KOT 998 A 1 HETATM 7 C C8 KOT . . . B 2 35.021 24.016 30.076 1 30.18 ? C8 KOT 998 A 1 HETATM 8 C C7 KOT . . . B 2 34.817 23.327 28.959 1 28.37 ? C7 KOT 998 A 1 HETATM 9 N N3 KOT . . . B 2 33.817 24.337 30.533 1 29.87 ? N3 KOT 998 A 1 HETATM 10 N N2 KOT . . . B 2 32.958 23.897 29.757 1 30.07 ? N2 KOT 998 A 1 HETATM 11 N N1 KOT . . . B 2 33.496 23.311 28.815 1 28.45 ? N1 KOT 998 A 1 HETATM 12 C C1 KOT . . . B 2 32.69 22.676 27.77 1 27.67 ? C1 KOT 998 A 1 HETATM 13 O O5 KOT . . . B 2 32.75 21.256 27.994 1 25.29 ? O5 KOT 998 A 1 HETATM 14 C C5 KOT . . . B 2 31.702 20.601 27.251 1 25.66 ? C5 KOT 998 A 1 HETATM 15 C C6 KOT . . . B 2 31.666 19.138 27.685 1 25.03 ? C6 KOT 998 A 1 HETATM 16 O O6 KOT . . . B 2 32.772 18.466 27.088 1 24.9 ? O6 KOT 998 A 1 HETATM 17 C C4 KOT . . . B 2 31.911 20.78 25.733 1 25.31 ? C4 KOT 998 A 1 HETATM 18 O O4 KOT . . . B 2 30.745 20.319 25.055 1 26.52 ? O4 KOT 998 A 1 HETATM 19 C C3 KOT . . . B 2 32.108 22.263 25.377 1 26.4 ? C3 KOT 998 A 1 HETATM 20 O O3 KOT . . . B 2 32.542 22.387 24.026 1 25.55 ? O3 KOT 998 A 1 HETATM 21 C C2 KOT . . . B 2 33.123 22.926 26.319 1 27.21 ? C2 KOT 998 A 1 HETATM 22 O O2 KOT . . . B 2 33.177 24.324 26.063 1 26.3 ? O2 KOT 998 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #