data_3G3L
#
_model_server_result.job_id            KCG6SZhjXjtwrJoC7P03og 
_model_server_result.datetime_utc      '2024-10-10 04:16:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3g3l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":5}' 
#
_entry.id    3G3L 
#
_exptl.entry_id    3G3L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3G3L 
_cell.length_a            107.621 
_cell.length_b            107.621 
_cell.length_c            89.296 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3G3L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 138 A ASP 169 1_555 A N MSE 139 A MSE 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale2 A C MSE 139 A MSE 170 1_555 A N LEU 140 A LEU 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C GLU 158 A GLU 189 1_555 A N MSE 159 A MSE 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale4 A C MSE 159 A MSE 190 1_555 A N ALA 160 A ALA 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale5 A C GLY 162 A GLY 193 1_555 A N MSE 163 A MSE 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 A C MSE 163 A MSE 194 1_555 A N LYS 164 A LYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale7 A C ALA 195 A ALA 226 1_555 A N MSE 196 A MSE 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C MSE 196 A MSE 227 1_555 A N VAL 197 A VAL 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale9 A C ASN 242 A ASN 273 1_555 A N MSE 243 A MSE 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale10 A C MSE 243 A MSE 274 1_555 A N ASN 244 A ASN 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale11 A C VAL 297 A VAL 328 1_555 A N MSE 298 A MSE 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale12 A C MSE 298 A MSE 329 1_555 A N ILE 299 A ILE 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3G3L 
_atom_sites.fract_transf_matrix[1][1]    0.009292 
_atom_sites.fract_transf_matrix[1][2]    0.005365 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010729 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011199 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 1 1 SO4 SO4 . 
C 3 GOL A 1 2 2 GOL GOL . 
D 3 GOL A 1 3 3 GOL GOL . 
E 3 GOL A 1 4 4 GOL GOL . 
F 3 GOL A 1 5 5 GOL GOL . 
G 3 GOL A 1 6 6 GOL GOL . 
H 3 GOL A 1 7 7 GOL GOL . 
I 3 GOL A 1 8 8 GOL GOL . 
J 3 GOL A 1 9 9 GOL GOL . 
K 3 GOL A 1 10 10 GOL GOL . 
L 4 HOH A 1 11 11 HOH HOH . 
L 4 HOH A 2 12 12 HOH HOH . 
L 4 HOH A 3 13 13 HOH HOH . 
L 4 HOH A 4 14 14 HOH HOH . 
L 4 HOH A 5 15 15 HOH HOH . 
L 4 HOH A 6 16 16 HOH HOH . 
L 4 HOH A 7 17 17 HOH HOH . 
L 4 HOH A 8 18 18 HOH HOH . 
L 4 HOH A 9 19 19 HOH HOH . 
L 4 HOH A 10 20 20 HOH HOH . 
L 4 HOH A 11 21 21 HOH HOH . 
L 4 HOH A 12 22 22 HOH HOH . 
L 4 HOH A 13 23 23 HOH HOH . 
L 4 HOH A 14 24 24 HOH HOH . 
L 4 HOH A 15 25 25 HOH HOH . 
L 4 HOH A 16 26 26 HOH HOH . 
L 4 HOH A 17 27 27 HOH HOH . 
L 4 HOH A 18 28 28 HOH HOH . 
L 4 HOH A 19 29 29 HOH HOH . 
L 4 HOH A 20 30 30 HOH HOH . 
L 4 HOH A 21 31 31 HOH HOH . 
L 4 HOH A 22 359 32 HOH HOH . 
L 4 HOH A 23 360 33 HOH HOH . 
L 4 HOH A 24 361 34 HOH HOH . 
L 4 HOH A 25 362 35 HOH HOH . 
L 4 HOH A 26 363 36 HOH HOH . 
L 4 HOH A 27 364 37 HOH HOH . 
L 4 HOH A 28 365 38 HOH HOH . 
L 4 HOH A 29 366 39 HOH HOH . 
L 4 HOH A 30 367 40 HOH HOH . 
L 4 HOH A 31 368 41 HOH HOH . 
L 4 HOH A 32 369 42 HOH HOH . 
L 4 HOH A 33 370 43 HOH HOH . 
L 4 HOH A 34 371 44 HOH HOH . 
L 4 HOH A 35 372 45 HOH HOH . 
L 4 HOH A 36 373 46 HOH HOH . 
L 4 HOH A 37 374 47 HOH HOH . 
L 4 HOH A 38 375 48 HOH HOH . 
L 4 HOH A 39 376 49 HOH HOH . 
L 4 HOH A 40 377 50 HOH HOH . 
L 4 HOH A 41 378 51 HOH HOH . 
L 4 HOH A 42 379 52 HOH HOH . 
L 4 HOH A 43 380 53 HOH HOH . 
L 4 HOH A 44 381 54 HOH HOH . 
L 4 HOH A 45 382 55 HOH HOH . 
L 4 HOH A 46 383 56 HOH HOH . 
L 4 HOH A 47 384 57 HOH HOH . 
L 4 HOH A 48 385 58 HOH HOH . 
L 4 HOH A 49 386 59 HOH HOH . 
L 4 HOH A 50 387 60 HOH HOH . 
L 4 HOH A 51 388 61 HOH HOH . 
L 4 HOH A 52 389 62 HOH HOH . 
L 4 HOH A 53 390 63 HOH HOH . 
L 4 HOH A 54 391 64 HOH HOH . 
L 4 HOH A 55 392 65 HOH HOH . 
L 4 HOH A 56 393 66 HOH HOH . 
L 4 HOH A 57 394 67 HOH HOH . 
L 4 HOH A 58 395 68 HOH HOH . 
L 4 HOH A 59 396 69 HOH HOH . 
L 4 HOH A 60 397 70 HOH HOH . 
L 4 HOH A 61 398 71 HOH HOH . 
L 4 HOH A 62 399 72 HOH HOH . 
L 4 HOH A 63 400 73 HOH HOH . 
L 4 HOH A 64 401 74 HOH HOH . 
L 4 HOH A 65 402 75 HOH HOH . 
L 4 HOH A 66 403 76 HOH HOH . 
L 4 HOH A 67 404 77 HOH HOH . 
L 4 HOH A 68 405 78 HOH HOH . 
L 4 HOH A 69 406 79 HOH HOH . 
L 4 HOH A 70 407 80 HOH HOH . 
L 4 HOH A 71 408 81 HOH HOH . 
L 4 HOH A 72 409 82 HOH HOH . 
L 4 HOH A 73 410 83 HOH HOH . 
L 4 HOH A 74 411 84 HOH HOH . 
L 4 HOH A 75 412 85 HOH HOH . 
L 4 HOH A 76 413 86 HOH HOH . 
L 4 HOH A 77 414 87 HOH HOH . 
L 4 HOH A 78 415 88 HOH HOH . 
L 4 HOH A 79 416 89 HOH HOH . 
L 4 HOH A 80 417 90 HOH HOH . 
L 4 HOH A 81 418 91 HOH HOH . 
L 4 HOH A 82 419 92 HOH HOH . 
L 4 HOH A 83 420 93 HOH HOH . 
L 4 HOH A 84 421 94 HOH HOH . 
L 4 HOH A 85 422 95 HOH HOH . 
L 4 HOH A 86 423 96 HOH HOH . 
L 4 HOH A 87 424 97 HOH HOH . 
L 4 HOH A 88 425 98 HOH HOH . 
L 4 HOH A 89 426 99 HOH HOH . 
L 4 HOH A 90 427 100 HOH HOH . 
L 4 HOH A 91 428 101 HOH HOH . 
L 4 HOH A 92 429 102 HOH HOH . 
L 4 HOH A 93 430 103 HOH HOH . 
L 4 HOH A 94 431 104 HOH HOH . 
L 4 HOH A 95 432 105 HOH HOH . 
L 4 HOH A 96 433 106 HOH HOH . 
L 4 HOH A 97 434 107 HOH HOH . 
L 4 HOH A 98 435 108 HOH HOH . 
L 4 HOH A 99 436 109 HOH HOH . 
L 4 HOH A 100 437 110 HOH HOH . 
L 4 HOH A 101 438 111 HOH HOH . 
L 4 HOH A 102 439 112 HOH HOH . 
L 4 HOH A 103 440 113 HOH HOH . 
L 4 HOH A 104 441 114 HOH HOH . 
L 4 HOH A 105 442 115 HOH HOH . 
L 4 HOH A 106 443 116 HOH HOH . 
L 4 HOH A 107 444 117 HOH HOH . 
L 4 HOH A 108 445 118 HOH HOH . 
L 4 HOH A 109 446 119 HOH HOH . 
L 4 HOH A 110 447 120 HOH HOH . 
L 4 HOH A 111 448 121 HOH HOH . 
L 4 HOH A 112 449 122 HOH HOH . 
L 4 HOH A 113 450 123 HOH HOH . 
L 4 HOH A 114 451 124 HOH HOH . 
L 4 HOH A 115 452 125 HOH HOH . 
L 4 HOH A 116 453 126 HOH HOH . 
L 4 HOH A 117 454 127 HOH HOH . 
L 4 HOH A 118 455 128 HOH HOH . 
L 4 HOH A 119 456 129 HOH HOH . 
L 4 HOH A 120 457 130 HOH HOH . 
L 4 HOH A 121 458 131 HOH HOH . 
L 4 HOH A 122 459 132 HOH HOH . 
L 4 HOH A 123 460 133 HOH HOH . 
L 4 HOH A 124 461 134 HOH HOH . 
L 4 HOH A 125 462 135 HOH HOH . 
L 4 HOH A 126 463 136 HOH HOH . 
L 4 HOH A 127 464 137 HOH HOH . 
L 4 HOH A 128 465 138 HOH HOH . 
L 4 HOH A 129 466 139 HOH HOH . 
L 4 HOH A 130 467 140 HOH HOH . 
L 4 HOH A 131 468 141 HOH HOH . 
L 4 HOH A 132 469 142 HOH HOH . 
L 4 HOH A 133 470 143 HOH HOH . 
L 4 HOH A 134 471 144 HOH HOH . 
L 4 HOH A 135 472 145 HOH HOH . 
L 4 HOH A 136 473 146 HOH HOH . 
L 4 HOH A 137 474 147 HOH HOH . 
L 4 HOH A 138 475 148 HOH HOH . 
L 4 HOH A 139 476 149 HOH HOH . 
L 4 HOH A 140 477 150 HOH HOH . 
L 4 HOH A 141 478 151 HOH HOH . 
L 4 HOH A 142 479 152 HOH HOH . 
L 4 HOH A 143 480 153 HOH HOH . 
L 4 HOH A 144 481 154 HOH HOH . 
L 4 HOH A 145 482 155 HOH HOH . 
L 4 HOH A 146 483 156 HOH HOH . 
L 4 HOH A 147 484 157 HOH HOH . 
L 4 HOH A 148 485 158 HOH HOH . 
L 4 HOH A 149 486 159 HOH HOH . 
L 4 HOH A 150 487 160 HOH HOH . 
L 4 HOH A 151 488 161 HOH HOH . 
L 4 HOH A 152 489 162 HOH HOH . 
L 4 HOH A 153 490 163 HOH HOH . 
L 4 HOH A 154 491 164 HOH HOH . 
L 4 HOH A 155 492 165 HOH HOH . 
L 4 HOH A 156 493 166 HOH HOH . 
L 4 HOH A 157 494 167 HOH HOH . 
L 4 HOH A 158 495 168 HOH HOH . 
L 4 HOH A 159 496 169 HOH HOH . 
L 4 HOH A 160 497 170 HOH HOH . 
L 4 HOH A 161 498 171 HOH HOH . 
L 4 HOH A 162 499 172 HOH HOH . 
L 4 HOH A 163 500 173 HOH HOH . 
L 4 HOH A 164 501 174 HOH HOH . 
L 4 HOH A 165 502 175 HOH HOH . 
L 4 HOH A 166 503 176 HOH HOH . 
L 4 HOH A 167 504 177 HOH HOH . 
L 4 HOH A 168 505 178 HOH HOH . 
L 4 HOH A 169 506 179 HOH HOH . 
L 4 HOH A 170 507 180 HOH HOH . 
L 4 HOH A 171 508 181 HOH HOH . 
L 4 HOH A 172 509 182 HOH HOH . 
L 4 HOH A 173 510 183 HOH HOH . 
L 4 HOH A 174 511 184 HOH HOH . 
L 4 HOH A 175 512 185 HOH HOH . 
L 4 HOH A 176 513 186 HOH HOH . 
L 4 HOH A 177 514 187 HOH HOH . 
L 4 HOH A 178 515 188 HOH HOH . 
L 4 HOH A 179 516 189 HOH HOH . 
L 4 HOH A 180 517 190 HOH HOH . 
L 4 HOH A 181 518 191 HOH HOH . 
L 4 HOH A 182 519 192 HOH HOH . 
L 4 HOH A 183 520 193 HOH HOH . 
L 4 HOH A 184 521 194 HOH HOH . 
L 4 HOH A 185 522 195 HOH HOH . 
L 4 HOH A 186 523 196 HOH HOH . 
L 4 HOH A 187 524 197 HOH HOH . 
L 4 HOH A 188 525 198 HOH HOH . 
L 4 HOH A 189 526 199 HOH HOH . 
L 4 HOH A 190 527 200 HOH HOH . 
L 4 HOH A 191 528 201 HOH HOH . 
L 4 HOH A 192 529 202 HOH HOH . 
L 4 HOH A 193 530 203 HOH HOH . 
L 4 HOH A 194 531 204 HOH HOH . 
L 4 HOH A 195 532 205 HOH HOH . 
L 4 HOH A 196 533 206 HOH HOH . 
L 4 HOH A 197 534 207 HOH HOH . 
L 4 HOH A 198 535 208 HOH HOH . 
L 4 HOH A 199 536 209 HOH HOH . 
L 4 HOH A 200 537 210 HOH HOH . 
L 4 HOH A 201 538 211 HOH HOH . 
L 4 HOH A 202 539 212 HOH HOH . 
L 4 HOH A 203 540 213 HOH HOH . 
L 4 HOH A 204 541 214 HOH HOH . 
L 4 HOH A 205 542 215 HOH HOH . 
L 4 HOH A 206 543 216 HOH HOH . 
L 4 HOH A 207 544 217 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 3 12.839 39.96 8.45 1 88.11 ? C1 GOL 5 A 1 
HETATM 2 O O1 GOL . . . F 3 11.991 39.547 7.422 1 91.01 ? O1 GOL 5 A 1 
HETATM 3 C C2 GOL . . . F 3 14.326 39.841 8.115 1 89.37 ? C2 GOL 5 A 1 
HETATM 4 O O2 GOL . . . F 3 14.674 40.957 7.336 1 85.96 ? O2 GOL 5 A 1 
HETATM 5 C C3 GOL . . . F 3 15.266 39.752 9.34 1 90.81 ? C3 GOL 5 A 1 
HETATM 6 O O3 GOL . . . F 3 14.692 39.377 10.595 1 90.24 ? O3 GOL 5 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#