data_3G3Q # _model_server_result.job_id sCKHhwd9bVXBWPvNupoktQ _model_server_result.datetime_utc '2024-11-16 19:29:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":25}' # _entry.id 3G3Q # _exptl.entry_id 3G3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 29 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3G3Q _cell.length_a 87.26 _cell.length_b 87.26 _cell.length_c 128.53 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,IA 1 1 B,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,JA 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 FA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale 1.57 covale1 C O1 PO4 . A PO4 15 1_555 EA P PO4 . B PO4 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.57 ? covale 1.57 covale2 C P PO4 . A PO4 15 1_555 FA O1 PO4 . B PO4 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.573 ? covale 1.58 covale3 D P PO4 . A PO4 17 1_555 E O1 PO4 . A PO4 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.581 ? covale 1.58 covale4 D O1 PO4 . A PO4 17 1_555 FA P PO4 . B PO4 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.585 ? covale 1.58 covale5 E P PO4 . A PO4 18 1_555 F O1 PO4 . A PO4 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.58 ? covale 1.59 covale6 F P PO4 . A PO4 19 1_555 G O1 PO4 . A PO4 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.59 ? covale 1.61 covale7 G P PO4 . A PO4 20 1_555 H O1 PO4 . A PO4 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? covale 1.58 covale8 H P PO4 . A PO4 21 1_555 I O1 PO4 . A PO4 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.583 ? covale 1.6 covale9 I P PO4 . A PO4 22 1_555 J O1 PO4 . A PO4 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? covale 1.61 covale10 J P PO4 . A PO4 23 1_555 K O1 PO4 . A PO4 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.613 ? covale 1.61 covale11 K P PO4 . A PO4 24 1_555 L O1 PO4 . A PO4 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? covale 1.6300000000000001 covale12 L P PO4 . A PO4 25 1_555 M O1 PO4 . A PO4 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.633 ? covale 1.62 covale13 M P PO4 . A PO4 26 1_555 N O1 PO4 . A PO4 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.622 ? covale 1.6300000000000001 covale14 N P PO4 . A PO4 27 1_555 O O1 PO4 . A PO4 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 ? covale 1.62 covale15 O P PO4 . A PO4 28 1_555 P O1 PO4 . A PO4 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.622 ? covale 1.6 covale16 R P PO4 . B PO4 1 1_555 S O1 PO4 . B PO4 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? covale 1.58 covale17 S P PO4 . B PO4 2 1_555 T O1 PO4 . B PO4 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.576 ? covale 1.6 covale18 T P PO4 . B PO4 3 1_555 U O1 PO4 . B PO4 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? covale 1.6 covale19 U P PO4 . B PO4 4 1_555 V O1 PO4 . B PO4 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? covale 1.59 covale20 V P PO4 . B PO4 5 1_555 W O1 PO4 . B PO4 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.594 ? covale 1.6 covale21 W P PO4 . B PO4 6 1_555 X O1 PO4 . B PO4 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? covale 1.59 covale22 X P PO4 . B PO4 7 1_555 Y O1 PO4 . B PO4 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.587 ? covale 1.58 covale23 Y P PO4 . B PO4 8 1_555 Z O1 PO4 . B PO4 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.578 ? covale 1.59 covale24 Z P PO4 . B PO4 9 1_555 AA O1 PO4 . B PO4 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.587 ? covale 1.58 covale25 AA P PO4 . B PO4 10 1_555 BA O1 PO4 . B PO4 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.577 ? covale 1.56 covale26 BA P PO4 . B PO4 11 1_555 CA O1 PO4 . B PO4 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.562 ? covale 1.55 covale27 CA P PO4 . B PO4 12 1_555 DA O1 PO4 . B PO4 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.553 ? covale 1.57 covale28 DA P PO4 . B PO4 13 1_555 EA O1 PO4 . B PO4 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.567 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3G3Q _atom_sites.fract_transf_matrix[1][1] 0.01146 _atom_sites.fract_transf_matrix[1][2] 0.006616 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00778 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 15 1 PO4 PO4 . D 2 PO4 A 1 17 1 PO4 PO4 . E 2 PO4 A 1 18 1 PO4 PO4 . F 2 PO4 A 1 19 1 PO4 PO4 . G 2 PO4 A 1 20 1 PO4 PO4 . H 2 PO4 A 1 21 1 PO4 PO4 . I 2 PO4 A 1 22 1 PO4 PO4 . J 2 PO4 A 1 23 1 PO4 PO4 . K 2 PO4 A 1 24 1 PO4 PO4 . L 2 PO4 A 1 25 1 PO4 PO4 . M 2 PO4 A 1 26 1 PO4 PO4 . N 2 PO4 A 1 27 1 PO4 PO4 . O 2 PO4 A 1 28 1 PO4 PO4 . P 2 PO4 A 1 29 1 PO4 PO4 . Q 3 SO4 A 1 1 1 SO4 SO4 . R 2 PO4 B 1 1 1 PO4 PO4 . S 2 PO4 B 1 2 1 PO4 PO4 . T 2 PO4 B 1 3 1 PO4 PO4 . U 2 PO4 B 1 4 1 PO4 PO4 . V 2 PO4 B 1 5 1 PO4 PO4 . W 2 PO4 B 1 6 1 PO4 PO4 . X 2 PO4 B 1 7 1 PO4 PO4 . Y 2 PO4 B 1 8 1 PO4 PO4 . Z 2 PO4 B 1 9 1 PO4 PO4 . AA 2 PO4 B 1 10 1 PO4 PO4 . BA 2 PO4 B 1 11 1 PO4 PO4 . CA 2 PO4 B 1 12 1 PO4 PO4 . DA 2 PO4 B 1 13 1 PO4 PO4 . EA 2 PO4 B 1 14 1 PO4 PO4 . FA 2 PO4 B 1 16 1 PO4 PO4 . GA 3 SO4 B 1 481 2 SO4 SO4 . HA 3 SO4 B 1 482 3 SO4 SO4 . IA 4 HOH A 1 3 3 HOH HOH . IA 4 HOH A 2 4 4 HOH HOH . IA 4 HOH A 3 5 5 HOH HOH . IA 4 HOH A 4 7 7 HOH HOH . IA 4 HOH A 5 8 8 HOH HOH . IA 4 HOH A 6 9 9 HOH HOH . IA 4 HOH A 7 11 11 HOH HOH . IA 4 HOH A 8 12 12 HOH HOH . IA 4 HOH A 9 13 13 HOH HOH . IA 4 HOH A 10 33 33 HOH HOH . IA 4 HOH A 11 34 34 HOH HOH . IA 4 HOH A 12 35 35 HOH HOH . IA 4 HOH A 13 36 36 HOH HOH . IA 4 HOH A 14 39 39 HOH HOH . IA 4 HOH A 15 41 41 HOH HOH . IA 4 HOH A 16 43 43 HOH HOH . IA 4 HOH A 17 45 45 HOH HOH . IA 4 HOH A 18 46 46 HOH HOH . IA 4 HOH A 19 50 50 HOH HOH . IA 4 HOH A 20 51 51 HOH HOH . IA 4 HOH A 21 53 53 HOH HOH . IA 4 HOH A 22 54 54 HOH HOH . IA 4 HOH A 23 55 55 HOH HOH . IA 4 HOH A 24 56 56 HOH HOH . IA 4 HOH A 25 481 17 HOH HOH . IA 4 HOH A 26 482 19 HOH HOH . IA 4 HOH A 27 483 20 HOH HOH . IA 4 HOH A 28 484 29 HOH HOH . JA 4 HOH B 1 15 15 HOH HOH . JA 4 HOH B 2 18 18 HOH HOH . JA 4 HOH B 3 21 21 HOH HOH . JA 4 HOH B 4 22 22 HOH HOH . JA 4 HOH B 5 23 23 HOH HOH . JA 4 HOH B 6 24 24 HOH HOH . JA 4 HOH B 7 25 25 HOH HOH . JA 4 HOH B 8 26 26 HOH HOH . JA 4 HOH B 9 27 27 HOH HOH . JA 4 HOH B 10 28 28 HOH HOH . JA 4 HOH B 11 30 30 HOH HOH . JA 4 HOH B 12 31 31 HOH HOH . JA 4 HOH B 13 32 32 HOH HOH . JA 4 HOH B 14 37 37 HOH HOH . JA 4 HOH B 15 38 38 HOH HOH . JA 4 HOH B 16 40 40 HOH HOH . JA 4 HOH B 17 42 42 HOH HOH . JA 4 HOH B 18 44 44 HOH HOH . JA 4 HOH B 19 47 47 HOH HOH . JA 4 HOH B 20 48 48 HOH HOH . JA 4 HOH B 21 49 49 HOH HOH . JA 4 HOH B 22 52 52 HOH HOH . JA 4 HOH B 23 57 57 HOH HOH . JA 4 HOH B 24 483 1 HOH HOH . JA 4 HOH B 25 484 2 HOH HOH . JA 4 HOH B 26 485 6 HOH HOH . JA 4 HOH B 27 486 10 HOH HOH . JA 4 HOH B 28 487 14 HOH HOH . JA 4 HOH B 29 488 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . L 2 52.334 -26.925 -3.024 1 58 ? P PO4 25 A 1 HETATM 2 O O1 PO4 . . . L 2 53.885 -26.695 -2.878 1 69.75 ? O1 PO4 25 A 1 HETATM 3 O O3 PO4 . . . L 2 51.964 -27.029 -1.499 1 87.86 ? O3 PO4 25 A 1 HETATM 4 O O4 PO4 . . . L 2 51.49 -26.06 -3.854 1 67.4 ? O4 PO4 25 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #