data_3G56 # _model_server_result.job_id TultROcv0gmvhux7AlvuqQ _model_server_result.datetime_utc '2024-11-24 01:20:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g56 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":196}' # _entry.id 3G56 # _exptl.entry_id 3G56 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.87 _cell.angle_gamma 90 _cell.entry_id 3G56 _cell.length_a 37.421 _cell.length_b 113.761 _cell.length_c 43.392 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G56 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 138 n n C1 C2 GOL sing 139 n n C1 H11 GOL sing 140 n n C1 H12 GOL sing 141 n n O1 HO1 GOL sing 142 n n C2 O2 GOL sing 143 n n C2 C3 GOL sing 144 n n C2 H2 GOL sing 145 n n O2 HO2 GOL sing 146 n n C3 O3 GOL sing 147 n n C3 H31 GOL sing 148 n n C3 H32 GOL sing 149 n n O3 HO3 GOL sing 150 n n # _atom_sites.entry_id 3G56 _atom_sites.fract_transf_matrix[1][1] 0.026723 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001808 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00879 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023098 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 195 195 EDO EDO . D 3 GOL A 1 196 196 GOL GOL . E 3 GOL B 1 195 195 GOL GOL . F 3 GOL B 1 196 196 GOL GOL . G 4 HOH A 1 197 197 HOH HOH . G 4 HOH A 2 198 198 HOH HOH . G 4 HOH A 3 199 199 HOH HOH . G 4 HOH A 4 200 200 HOH HOH . G 4 HOH A 5 203 203 HOH HOH . G 4 HOH A 6 206 206 HOH HOH . G 4 HOH A 7 207 207 HOH HOH . G 4 HOH A 8 208 208 HOH HOH . G 4 HOH A 9 212 212 HOH HOH . G 4 HOH A 10 218 218 HOH HOH . G 4 HOH A 11 224 224 HOH HOH . G 4 HOH A 12 227 227 HOH HOH . G 4 HOH A 13 228 228 HOH HOH . G 4 HOH A 14 229 229 HOH HOH . G 4 HOH A 15 230 230 HOH HOH . G 4 HOH A 16 231 231 HOH HOH . G 4 HOH A 17 233 233 HOH HOH . G 4 HOH A 18 235 235 HOH HOH . G 4 HOH A 19 243 243 HOH HOH . G 4 HOH A 20 246 246 HOH HOH . G 4 HOH A 21 257 257 HOH HOH . G 4 HOH A 22 258 258 HOH HOH . G 4 HOH A 23 259 259 HOH HOH . G 4 HOH A 24 260 260 HOH HOH . G 4 HOH A 25 261 261 HOH HOH . G 4 HOH A 26 262 262 HOH HOH . G 4 HOH A 27 266 266 HOH HOH . H 4 HOH B 1 197 197 HOH HOH . H 4 HOH B 2 198 198 HOH HOH . H 4 HOH B 3 199 199 HOH HOH . H 4 HOH B 4 201 201 HOH HOH . H 4 HOH B 5 202 202 HOH HOH . H 4 HOH B 6 204 204 HOH HOH . H 4 HOH B 7 205 205 HOH HOH . H 4 HOH B 8 210 210 HOH HOH . H 4 HOH B 9 211 211 HOH HOH . H 4 HOH B 10 213 213 HOH HOH . H 4 HOH B 11 214 214 HOH HOH . H 4 HOH B 12 215 215 HOH HOH . H 4 HOH B 13 216 216 HOH HOH . H 4 HOH B 14 217 217 HOH HOH . H 4 HOH B 15 219 219 HOH HOH . H 4 HOH B 16 220 220 HOH HOH . H 4 HOH B 17 221 221 HOH HOH . H 4 HOH B 18 222 222 HOH HOH . H 4 HOH B 19 223 223 HOH HOH . H 4 HOH B 20 225 225 HOH HOH . H 4 HOH B 21 226 226 HOH HOH . H 4 HOH B 22 241 241 HOH HOH . H 4 HOH B 23 244 244 HOH HOH . H 4 HOH B 24 245 245 HOH HOH . H 4 HOH B 25 247 247 HOH HOH . H 4 HOH B 26 250 250 HOH HOH . H 4 HOH B 27 253 253 HOH HOH . H 4 HOH B 28 256 256 HOH HOH . H 4 HOH B 29 263 263 HOH HOH . H 4 HOH B 30 270 270 HOH HOH . H 4 HOH B 31 272 272 HOH HOH . H 4 HOH B 32 278 278 HOH HOH . H 4 HOH B 33 280 280 HOH HOH . H 4 HOH B 34 282 282 HOH HOH . H 4 HOH B 35 283 283 HOH HOH . H 4 HOH B 36 285 285 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 3 -0.55 -16.321 8.926 1 64.04 ? C1 GOL 196 B 1 HETATM 2 O O1 GOL . . . F 3 -0.533 -14.892 9.055 1 55.47 ? O1 GOL 196 B 1 HETATM 3 C C2 GOL . . . F 3 0.755 -16.971 8.406 1 62.75 ? C2 GOL 196 B 1 HETATM 4 O O2 GOL . . . F 3 0.517 -18.321 8.06 1 60.25 ? O2 GOL 196 B 1 HETATM 5 C C3 GOL . . . F 3 1.301 -16.221 7.168 1 63.88 ? C3 GOL 196 B 1 HETATM 6 O O3 GOL . . . F 3 2.038 -17.032 6.249 1 63.82 ? O3 GOL 196 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #