data_3G5O # _model_server_result.job_id wsNK6YSMw_43pwrN0Mn-Sg _model_server_result.datetime_utc '2024-11-23 10:42:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g5o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":502}' # _entry.id 3G5O # _exptl.entry_id 3G5O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G5O _cell.length_a 75.54 _cell.length_b 79.481 _cell.length_c 86.278 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G5O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 346 n n C C2 TRS sing 347 n n C C3 TRS sing 348 n n C N TRS sing 349 n n C1 O1 TRS sing 350 n n C1 H11 TRS sing 351 n n C1 H12 TRS sing 352 n n C2 O2 TRS sing 353 n n C2 H21 TRS sing 354 n n C2 H22 TRS sing 355 n n C3 O3 TRS sing 356 n n C3 H31 TRS sing 357 n n C3 H32 TRS sing 358 n n N HN1 TRS sing 359 n n N HN2 TRS sing 360 n n N HN3 TRS sing 361 n n O1 HO1 TRS sing 362 n n O2 HO2 TRS sing 363 n n O3 HO3 TRS sing 364 n n # _atom_sites.entry_id 3G5O _atom_sites.fract_transf_matrix[1][1] 0.013238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01159 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SCN A 1 503 6788 SCN SCN . F 4 CL A 1 501 1 CL CL . G 5 GOL A 1 504 1 GOL GOL . H 6 IMD A 1 505 1 IMD IMD . I 7 TRS C 1 502 7359 TRS TRS . J 8 HOH A 1 109 7 HOH HOH . J 8 HOH A 2 110 8 HOH HOH . J 8 HOH A 3 111 13 HOH HOH . J 8 HOH A 4 112 15 HOH HOH . J 8 HOH A 5 113 16 HOH HOH . J 8 HOH A 6 114 19 HOH HOH . J 8 HOH A 7 115 115 HOH HOH . J 8 HOH A 8 116 116 HOH HOH . J 8 HOH A 9 117 20 HOH HOH . J 8 HOH A 10 118 29 HOH HOH . J 8 HOH A 11 119 119 HOH HOH . J 8 HOH A 12 120 37 HOH HOH . J 8 HOH A 13 121 39 HOH HOH . J 8 HOH A 14 122 42 HOH HOH . J 8 HOH A 15 123 48 HOH HOH . J 8 HOH A 16 124 55 HOH HOH . J 8 HOH A 17 125 59 HOH HOH . J 8 HOH A 18 126 73 HOH HOH . J 8 HOH A 19 127 74 HOH HOH . J 8 HOH A 20 128 75 HOH HOH . J 8 HOH A 21 129 78 HOH HOH . J 8 HOH A 22 130 83 HOH HOH . J 8 HOH A 23 131 84 HOH HOH . J 8 HOH A 24 132 132 HOH HOH . J 8 HOH A 25 133 88 HOH HOH . J 8 HOH A 26 134 93 HOH HOH . J 8 HOH A 27 135 135 HOH HOH . J 8 HOH A 28 136 94 HOH HOH . J 8 HOH A 29 137 137 HOH HOH . J 8 HOH A 30 138 138 HOH HOH . J 8 HOH A 31 139 105 HOH HOH . J 8 HOH A 32 140 107 HOH HOH . J 8 HOH A 33 143 143 HOH HOH . J 8 HOH A 34 144 144 HOH HOH . J 8 HOH A 35 145 145 HOH HOH . J 8 HOH A 36 150 150 HOH HOH . J 8 HOH A 37 151 151 HOH HOH . J 8 HOH A 38 152 152 HOH HOH . J 8 HOH A 39 153 153 HOH HOH . J 8 HOH A 40 154 154 HOH HOH . J 8 HOH A 41 163 163 HOH HOH . J 8 HOH A 42 167 167 HOH HOH . J 8 HOH A 43 168 168 HOH HOH . K 8 HOH B 1 103 103 HOH HOH . K 8 HOH B 2 104 5 HOH HOH . K 8 HOH B 3 105 10 HOH HOH . K 8 HOH B 4 106 14 HOH HOH . K 8 HOH B 5 107 21 HOH HOH . K 8 HOH B 6 108 22 HOH HOH . K 8 HOH B 7 109 109 HOH HOH . K 8 HOH B 8 110 23 HOH HOH . K 8 HOH B 9 111 111 HOH HOH . K 8 HOH B 10 112 112 HOH HOH . K 8 HOH B 11 113 27 HOH HOH . K 8 HOH B 12 114 114 HOH HOH . K 8 HOH B 13 115 33 HOH HOH . K 8 HOH B 14 116 35 HOH HOH . K 8 HOH B 15 117 40 HOH HOH . K 8 HOH B 16 118 44 HOH HOH . K 8 HOH B 17 119 51 HOH HOH . K 8 HOH B 18 120 120 HOH HOH . K 8 HOH B 19 121 52 HOH HOH . K 8 HOH B 20 122 122 HOH HOH . K 8 HOH B 21 123 53 HOH HOH . K 8 HOH B 22 124 60 HOH HOH . K 8 HOH B 23 125 125 HOH HOH . K 8 HOH B 24 126 68 HOH HOH . K 8 HOH B 25 127 69 HOH HOH . K 8 HOH B 26 128 128 HOH HOH . K 8 HOH B 27 129 72 HOH HOH . K 8 HOH B 28 130 80 HOH HOH . K 8 HOH B 29 131 81 HOH HOH . K 8 HOH B 30 132 82 HOH HOH . K 8 HOH B 31 133 86 HOH HOH . K 8 HOH B 32 134 89 HOH HOH . K 8 HOH B 33 135 98 HOH HOH . K 8 HOH B 34 158 158 HOH HOH . K 8 HOH B 35 159 159 HOH HOH . K 8 HOH B 36 161 161 HOH HOH . K 8 HOH B 37 164 164 HOH HOH . K 8 HOH B 38 165 165 HOH HOH . K 8 HOH B 39 170 170 HOH HOH . K 8 HOH B 40 171 171 HOH HOH . K 8 HOH B 41 172 172 HOH HOH . L 8 HOH C 1 103 1 HOH HOH . L 8 HOH C 2 104 3 HOH HOH . L 8 HOH C 3 105 9 HOH HOH . L 8 HOH C 4 106 11 HOH HOH . L 8 HOH C 5 107 12 HOH HOH . L 8 HOH C 6 108 108 HOH HOH . L 8 HOH C 7 109 17 HOH HOH . L 8 HOH C 8 110 25 HOH HOH . L 8 HOH C 9 111 28 HOH HOH . L 8 HOH C 10 112 30 HOH HOH . L 8 HOH C 11 113 31 HOH HOH . L 8 HOH C 12 114 34 HOH HOH . L 8 HOH C 13 115 43 HOH HOH . L 8 HOH C 14 116 50 HOH HOH . L 8 HOH C 15 117 57 HOH HOH . L 8 HOH C 16 118 118 HOH HOH . L 8 HOH C 17 119 61 HOH HOH . L 8 HOH C 18 120 66 HOH HOH . L 8 HOH C 19 121 121 HOH HOH . L 8 HOH C 20 122 67 HOH HOH . L 8 HOH C 21 123 76 HOH HOH . L 8 HOH C 22 124 124 HOH HOH . L 8 HOH C 23 125 79 HOH HOH . L 8 HOH C 24 126 126 HOH HOH . L 8 HOH C 25 127 127 HOH HOH . L 8 HOH C 26 128 85 HOH HOH . L 8 HOH C 27 129 129 HOH HOH . L 8 HOH C 28 130 130 HOH HOH . L 8 HOH C 29 131 87 HOH HOH . L 8 HOH C 30 132 90 HOH HOH . L 8 HOH C 31 133 92 HOH HOH . L 8 HOH C 32 134 96 HOH HOH . L 8 HOH C 33 135 97 HOH HOH . L 8 HOH C 34 136 136 HOH HOH . L 8 HOH C 35 139 139 HOH HOH . L 8 HOH C 36 140 140 HOH HOH . L 8 HOH C 37 149 149 HOH HOH . L 8 HOH C 38 155 155 HOH HOH . L 8 HOH C 39 156 156 HOH HOH . L 8 HOH C 40 157 157 HOH HOH . L 8 HOH C 41 160 160 HOH HOH . L 8 HOH C 42 162 162 HOH HOH . L 8 HOH C 43 173 173 HOH HOH . M 8 HOH D 1 109 2 HOH HOH . M 8 HOH D 2 110 110 HOH HOH . M 8 HOH D 3 111 4 HOH HOH . M 8 HOH D 4 112 6 HOH HOH . M 8 HOH D 5 113 113 HOH HOH . M 8 HOH D 6 114 18 HOH HOH . M 8 HOH D 7 115 24 HOH HOH . M 8 HOH D 8 116 26 HOH HOH . M 8 HOH D 9 117 117 HOH HOH . M 8 HOH D 10 118 32 HOH HOH . M 8 HOH D 11 119 36 HOH HOH . M 8 HOH D 12 120 38 HOH HOH . M 8 HOH D 13 121 41 HOH HOH . M 8 HOH D 14 122 45 HOH HOH . M 8 HOH D 15 123 123 HOH HOH . M 8 HOH D 16 124 46 HOH HOH . M 8 HOH D 17 125 47 HOH HOH . M 8 HOH D 18 126 49 HOH HOH . M 8 HOH D 19 127 54 HOH HOH . M 8 HOH D 20 128 56 HOH HOH . M 8 HOH D 21 129 58 HOH HOH . M 8 HOH D 22 130 62 HOH HOH . M 8 HOH D 23 131 131 HOH HOH . M 8 HOH D 24 132 63 HOH HOH . M 8 HOH D 25 133 133 HOH HOH . M 8 HOH D 26 134 134 HOH HOH . M 8 HOH D 27 135 64 HOH HOH . M 8 HOH D 28 136 65 HOH HOH . M 8 HOH D 29 137 70 HOH HOH . M 8 HOH D 30 138 71 HOH HOH . M 8 HOH D 31 139 77 HOH HOH . M 8 HOH D 32 140 91 HOH HOH . M 8 HOH D 33 141 141 HOH HOH . M 8 HOH D 34 142 142 HOH HOH . M 8 HOH D 35 143 95 HOH HOH . M 8 HOH D 36 144 99 HOH HOH . M 8 HOH D 37 145 100 HOH HOH . M 8 HOH D 38 146 146 HOH HOH . M 8 HOH D 39 147 147 HOH HOH . M 8 HOH D 40 148 148 HOH HOH . M 8 HOH D 41 149 101 HOH HOH . M 8 HOH D 42 150 102 HOH HOH . M 8 HOH D 43 151 104 HOH HOH . M 8 HOH D 44 152 106 HOH HOH . M 8 HOH D 45 166 166 HOH HOH . M 8 HOH D 46 169 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . I 7 9.042 15.822 23.147 1 50.34 ? C TRS 502 C 1 HETATM 2 C C1 TRS . . . I 7 7.89 16.832 23.021 1 50.55 ? C1 TRS 502 C 1 HETATM 3 C C2 TRS . . . I 7 9.909 15.865 21.901 1 50.04 ? C2 TRS 502 C 1 HETATM 4 C C3 TRS . . . I 7 8.465 14.43 23.394 1 50.83 ? C3 TRS 502 C 1 HETATM 5 N N TRS . . . I 7 9.893 16.132 24.316 1 50 ? N TRS 502 C 1 HETATM 6 O O1 TRS . . . I 7 7.943 17.71 21.918 1 50.75 ? O1 TRS 502 C 1 HETATM 7 O O2 TRS . . . I 7 10.777 16.955 22.051 1 44.56 ? O2 TRS 502 C 1 HETATM 8 O O3 TRS . . . I 7 7.112 14.595 23.77 1 52.36 ? O3 TRS 502 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 8 #