data_3G5O
#
_model_server_result.job_id            tSxIZaCakMlTgH1-Ieo_ow 
_model_server_result.datetime_utc      '2024-11-27 02:53:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3g5o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":504}' 
#
_entry.id    3G5O 
#
_exptl.entry_id    3G5O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3G5O 
_cell.length_a            75.54 
_cell.length_b            79.481 
_cell.length_c            86.278 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3G5O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     3G5O 
_atom_sites.fract_transf_matrix[1][1]    0.013238 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012582 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01159 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SCN A 1 503 6788 SCN SCN . 
F 4 CL A 1 501 1 CL CL . 
G 5 GOL A 1 504 1 GOL GOL . 
H 6 IMD A 1 505 1 IMD IMD . 
I 7 TRS C 1 502 7359 TRS TRS . 
J 8 HOH A 1 109 7 HOH HOH . 
J 8 HOH A 2 110 8 HOH HOH . 
J 8 HOH A 3 111 13 HOH HOH . 
J 8 HOH A 4 112 15 HOH HOH . 
J 8 HOH A 5 113 16 HOH HOH . 
J 8 HOH A 6 114 19 HOH HOH . 
J 8 HOH A 7 115 115 HOH HOH . 
J 8 HOH A 8 116 116 HOH HOH . 
J 8 HOH A 9 117 20 HOH HOH . 
J 8 HOH A 10 118 29 HOH HOH . 
J 8 HOH A 11 119 119 HOH HOH . 
J 8 HOH A 12 120 37 HOH HOH . 
J 8 HOH A 13 121 39 HOH HOH . 
J 8 HOH A 14 122 42 HOH HOH . 
J 8 HOH A 15 123 48 HOH HOH . 
J 8 HOH A 16 124 55 HOH HOH . 
J 8 HOH A 17 125 59 HOH HOH . 
J 8 HOH A 18 126 73 HOH HOH . 
J 8 HOH A 19 127 74 HOH HOH . 
J 8 HOH A 20 128 75 HOH HOH . 
J 8 HOH A 21 129 78 HOH HOH . 
J 8 HOH A 22 130 83 HOH HOH . 
J 8 HOH A 23 131 84 HOH HOH . 
J 8 HOH A 24 132 132 HOH HOH . 
J 8 HOH A 25 133 88 HOH HOH . 
J 8 HOH A 26 134 93 HOH HOH . 
J 8 HOH A 27 135 135 HOH HOH . 
J 8 HOH A 28 136 94 HOH HOH . 
J 8 HOH A 29 137 137 HOH HOH . 
J 8 HOH A 30 138 138 HOH HOH . 
J 8 HOH A 31 139 105 HOH HOH . 
J 8 HOH A 32 140 107 HOH HOH . 
J 8 HOH A 33 143 143 HOH HOH . 
J 8 HOH A 34 144 144 HOH HOH . 
J 8 HOH A 35 145 145 HOH HOH . 
J 8 HOH A 36 150 150 HOH HOH . 
J 8 HOH A 37 151 151 HOH HOH . 
J 8 HOH A 38 152 152 HOH HOH . 
J 8 HOH A 39 153 153 HOH HOH . 
J 8 HOH A 40 154 154 HOH HOH . 
J 8 HOH A 41 163 163 HOH HOH . 
J 8 HOH A 42 167 167 HOH HOH . 
J 8 HOH A 43 168 168 HOH HOH . 
K 8 HOH B 1 103 103 HOH HOH . 
K 8 HOH B 2 104 5 HOH HOH . 
K 8 HOH B 3 105 10 HOH HOH . 
K 8 HOH B 4 106 14 HOH HOH . 
K 8 HOH B 5 107 21 HOH HOH . 
K 8 HOH B 6 108 22 HOH HOH . 
K 8 HOH B 7 109 109 HOH HOH . 
K 8 HOH B 8 110 23 HOH HOH . 
K 8 HOH B 9 111 111 HOH HOH . 
K 8 HOH B 10 112 112 HOH HOH . 
K 8 HOH B 11 113 27 HOH HOH . 
K 8 HOH B 12 114 114 HOH HOH . 
K 8 HOH B 13 115 33 HOH HOH . 
K 8 HOH B 14 116 35 HOH HOH . 
K 8 HOH B 15 117 40 HOH HOH . 
K 8 HOH B 16 118 44 HOH HOH . 
K 8 HOH B 17 119 51 HOH HOH . 
K 8 HOH B 18 120 120 HOH HOH . 
K 8 HOH B 19 121 52 HOH HOH . 
K 8 HOH B 20 122 122 HOH HOH . 
K 8 HOH B 21 123 53 HOH HOH . 
K 8 HOH B 22 124 60 HOH HOH . 
K 8 HOH B 23 125 125 HOH HOH . 
K 8 HOH B 24 126 68 HOH HOH . 
K 8 HOH B 25 127 69 HOH HOH . 
K 8 HOH B 26 128 128 HOH HOH . 
K 8 HOH B 27 129 72 HOH HOH . 
K 8 HOH B 28 130 80 HOH HOH . 
K 8 HOH B 29 131 81 HOH HOH . 
K 8 HOH B 30 132 82 HOH HOH . 
K 8 HOH B 31 133 86 HOH HOH . 
K 8 HOH B 32 134 89 HOH HOH . 
K 8 HOH B 33 135 98 HOH HOH . 
K 8 HOH B 34 158 158 HOH HOH . 
K 8 HOH B 35 159 159 HOH HOH . 
K 8 HOH B 36 161 161 HOH HOH . 
K 8 HOH B 37 164 164 HOH HOH . 
K 8 HOH B 38 165 165 HOH HOH . 
K 8 HOH B 39 170 170 HOH HOH . 
K 8 HOH B 40 171 171 HOH HOH . 
K 8 HOH B 41 172 172 HOH HOH . 
L 8 HOH C 1 103 1 HOH HOH . 
L 8 HOH C 2 104 3 HOH HOH . 
L 8 HOH C 3 105 9 HOH HOH . 
L 8 HOH C 4 106 11 HOH HOH . 
L 8 HOH C 5 107 12 HOH HOH . 
L 8 HOH C 6 108 108 HOH HOH . 
L 8 HOH C 7 109 17 HOH HOH . 
L 8 HOH C 8 110 25 HOH HOH . 
L 8 HOH C 9 111 28 HOH HOH . 
L 8 HOH C 10 112 30 HOH HOH . 
L 8 HOH C 11 113 31 HOH HOH . 
L 8 HOH C 12 114 34 HOH HOH . 
L 8 HOH C 13 115 43 HOH HOH . 
L 8 HOH C 14 116 50 HOH HOH . 
L 8 HOH C 15 117 57 HOH HOH . 
L 8 HOH C 16 118 118 HOH HOH . 
L 8 HOH C 17 119 61 HOH HOH . 
L 8 HOH C 18 120 66 HOH HOH . 
L 8 HOH C 19 121 121 HOH HOH . 
L 8 HOH C 20 122 67 HOH HOH . 
L 8 HOH C 21 123 76 HOH HOH . 
L 8 HOH C 22 124 124 HOH HOH . 
L 8 HOH C 23 125 79 HOH HOH . 
L 8 HOH C 24 126 126 HOH HOH . 
L 8 HOH C 25 127 127 HOH HOH . 
L 8 HOH C 26 128 85 HOH HOH . 
L 8 HOH C 27 129 129 HOH HOH . 
L 8 HOH C 28 130 130 HOH HOH . 
L 8 HOH C 29 131 87 HOH HOH . 
L 8 HOH C 30 132 90 HOH HOH . 
L 8 HOH C 31 133 92 HOH HOH . 
L 8 HOH C 32 134 96 HOH HOH . 
L 8 HOH C 33 135 97 HOH HOH . 
L 8 HOH C 34 136 136 HOH HOH . 
L 8 HOH C 35 139 139 HOH HOH . 
L 8 HOH C 36 140 140 HOH HOH . 
L 8 HOH C 37 149 149 HOH HOH . 
L 8 HOH C 38 155 155 HOH HOH . 
L 8 HOH C 39 156 156 HOH HOH . 
L 8 HOH C 40 157 157 HOH HOH . 
L 8 HOH C 41 160 160 HOH HOH . 
L 8 HOH C 42 162 162 HOH HOH . 
L 8 HOH C 43 173 173 HOH HOH . 
M 8 HOH D 1 109 2 HOH HOH . 
M 8 HOH D 2 110 110 HOH HOH . 
M 8 HOH D 3 111 4 HOH HOH . 
M 8 HOH D 4 112 6 HOH HOH . 
M 8 HOH D 5 113 113 HOH HOH . 
M 8 HOH D 6 114 18 HOH HOH . 
M 8 HOH D 7 115 24 HOH HOH . 
M 8 HOH D 8 116 26 HOH HOH . 
M 8 HOH D 9 117 117 HOH HOH . 
M 8 HOH D 10 118 32 HOH HOH . 
M 8 HOH D 11 119 36 HOH HOH . 
M 8 HOH D 12 120 38 HOH HOH . 
M 8 HOH D 13 121 41 HOH HOH . 
M 8 HOH D 14 122 45 HOH HOH . 
M 8 HOH D 15 123 123 HOH HOH . 
M 8 HOH D 16 124 46 HOH HOH . 
M 8 HOH D 17 125 47 HOH HOH . 
M 8 HOH D 18 126 49 HOH HOH . 
M 8 HOH D 19 127 54 HOH HOH . 
M 8 HOH D 20 128 56 HOH HOH . 
M 8 HOH D 21 129 58 HOH HOH . 
M 8 HOH D 22 130 62 HOH HOH . 
M 8 HOH D 23 131 131 HOH HOH . 
M 8 HOH D 24 132 63 HOH HOH . 
M 8 HOH D 25 133 133 HOH HOH . 
M 8 HOH D 26 134 134 HOH HOH . 
M 8 HOH D 27 135 64 HOH HOH . 
M 8 HOH D 28 136 65 HOH HOH . 
M 8 HOH D 29 137 70 HOH HOH . 
M 8 HOH D 30 138 71 HOH HOH . 
M 8 HOH D 31 139 77 HOH HOH . 
M 8 HOH D 32 140 91 HOH HOH . 
M 8 HOH D 33 141 141 HOH HOH . 
M 8 HOH D 34 142 142 HOH HOH . 
M 8 HOH D 35 143 95 HOH HOH . 
M 8 HOH D 36 144 99 HOH HOH . 
M 8 HOH D 37 145 100 HOH HOH . 
M 8 HOH D 38 146 146 HOH HOH . 
M 8 HOH D 39 147 147 HOH HOH . 
M 8 HOH D 40 148 148 HOH HOH . 
M 8 HOH D 41 149 101 HOH HOH . 
M 8 HOH D 42 150 102 HOH HOH . 
M 8 HOH D 43 151 104 HOH HOH . 
M 8 HOH D 44 152 106 HOH HOH . 
M 8 HOH D 45 166 166 HOH HOH . 
M 8 HOH D 46 169 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 5 14.013 -9.931 58.851 1 49.87 ? C1 GOL 504 A 1 
HETATM 2 O O1 GOL . . . G 5 13.771 -9.595 57.492 1 50.56 ? O1 GOL 504 A 1 
HETATM 3 C C2 GOL . . . G 5 15.093 -10.984 59.108 1 51.26 ? C2 GOL 504 A 1 
HETATM 4 O O2 GOL . . . G 5 15.793 -10.741 60.329 1 49.41 ? O2 GOL 504 A 1 
HETATM 5 C C3 GOL . . . G 5 16.068 -11.102 57.947 1 51.74 ? C3 GOL 504 A 1 
HETATM 6 O O3 GOL . . . G 5 15.384 -11.649 56.846 1 52.45 ? O3 GOL 504 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#