data_3G5Q # _model_server_result.job_id 3Gv-SUPUspKAam1zwN2a3A _model_server_result.datetime_utc '2025-01-03 00:00:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g5q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":445}' # _entry.id 3G5Q # _exptl.entry_id 3G5Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4R)-2-METHYLPENTANE-2,4-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G5Q _cell.length_a 68.355 _cell.length_b 75.37 _cell.length_c 156.089 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G5Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MRD _chem_comp.mon_nstd_flag . _chem_comp.name (4R)-2-METHYLPENTANE-2,4-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MRD sing 328 n n C1 H1C1 MRD sing 329 n n C1 H1C2 MRD sing 330 n n C1 H1C3 MRD sing 331 n n C2 O2 MRD sing 332 n n C2 CM MRD sing 333 n n C2 C3 MRD sing 334 n n O2 H2 MRD sing 335 n n CM HMC1 MRD sing 336 n n CM HMC2 MRD sing 337 n n CM HMC3 MRD sing 338 n n C3 C4 MRD sing 339 n n C3 H3C1 MRD sing 340 n n C3 H3C2 MRD sing 341 n n C4 O4 MRD sing 342 n n C4 C5 MRD sing 343 n n C4 H4 MRD sing 344 n n O4 HA MRD sing 345 n n C5 H5C1 MRD sing 346 n n C5 H5C2 MRD sing 347 n n C5 H5C3 MRD sing 348 n n # _atom_sites.entry_id 3G5Q _atom_sites.fract_transf_matrix[1][1] 0.01463 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013268 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 444 1 FAD FAD . C 3 MRD A 1 445 2 MRD MPD . D 4 HOH A 1 446 1 HOH HOH . D 4 HOH A 2 447 2 HOH HOH . D 4 HOH A 3 448 3 HOH HOH . D 4 HOH A 4 449 4 HOH HOH . D 4 HOH A 5 450 5 HOH HOH . D 4 HOH A 6 451 6 HOH HOH . D 4 HOH A 7 452 7 HOH HOH . D 4 HOH A 8 453 8 HOH HOH . D 4 HOH A 9 454 9 HOH HOH . D 4 HOH A 10 455 10 HOH HOH . D 4 HOH A 11 456 11 HOH HOH . D 4 HOH A 12 457 12 HOH HOH . D 4 HOH A 13 458 13 HOH HOH . D 4 HOH A 14 459 14 HOH HOH . D 4 HOH A 15 460 15 HOH HOH . D 4 HOH A 16 461 16 HOH HOH . D 4 HOH A 17 462 17 HOH HOH . D 4 HOH A 18 463 18 HOH HOH . D 4 HOH A 19 464 19 HOH HOH . D 4 HOH A 20 465 20 HOH HOH . D 4 HOH A 21 466 21 HOH HOH . D 4 HOH A 22 467 22 HOH HOH . D 4 HOH A 23 468 23 HOH HOH . D 4 HOH A 24 469 24 HOH HOH . D 4 HOH A 25 470 25 HOH HOH . D 4 HOH A 26 471 26 HOH HOH . D 4 HOH A 27 472 27 HOH HOH . D 4 HOH A 28 473 28 HOH HOH . D 4 HOH A 29 474 29 HOH HOH . D 4 HOH A 30 475 30 HOH HOH . D 4 HOH A 31 476 31 HOH HOH . D 4 HOH A 32 477 32 HOH HOH . D 4 HOH A 33 478 33 HOH HOH . D 4 HOH A 34 479 34 HOH HOH . D 4 HOH A 35 480 35 HOH HOH . D 4 HOH A 36 481 36 HOH HOH . D 4 HOH A 37 482 37 HOH HOH . D 4 HOH A 38 483 38 HOH HOH . D 4 HOH A 39 484 39 HOH HOH . D 4 HOH A 40 485 40 HOH HOH . D 4 HOH A 41 486 41 HOH HOH . D 4 HOH A 42 487 42 HOH HOH . D 4 HOH A 43 488 43 HOH HOH . D 4 HOH A 44 489 44 HOH HOH . D 4 HOH A 45 490 45 HOH HOH . D 4 HOH A 46 491 46 HOH HOH . D 4 HOH A 47 492 47 HOH HOH . D 4 HOH A 48 493 48 HOH HOH . D 4 HOH A 49 494 49 HOH HOH . D 4 HOH A 50 495 50 HOH HOH . D 4 HOH A 51 496 51 HOH HOH . D 4 HOH A 52 497 52 HOH HOH . D 4 HOH A 53 498 53 HOH HOH . D 4 HOH A 54 499 54 HOH HOH . D 4 HOH A 55 500 55 HOH HOH . D 4 HOH A 56 501 56 HOH HOH . D 4 HOH A 57 502 57 HOH HOH . D 4 HOH A 58 503 58 HOH HOH . D 4 HOH A 59 504 59 HOH HOH . D 4 HOH A 60 505 60 HOH HOH . D 4 HOH A 61 506 61 HOH HOH . D 4 HOH A 62 507 62 HOH HOH . D 4 HOH A 63 508 63 HOH HOH . D 4 HOH A 64 509 64 HOH HOH . D 4 HOH A 65 510 65 HOH HOH . D 4 HOH A 66 511 66 HOH HOH . D 4 HOH A 67 512 67 HOH HOH . D 4 HOH A 68 513 68 HOH HOH . D 4 HOH A 69 514 69 HOH HOH . D 4 HOH A 70 515 70 HOH HOH . D 4 HOH A 71 516 71 HOH HOH . D 4 HOH A 72 517 72 HOH HOH . D 4 HOH A 73 518 73 HOH HOH . D 4 HOH A 74 519 74 HOH HOH . D 4 HOH A 75 520 75 HOH HOH . D 4 HOH A 76 521 76 HOH HOH . D 4 HOH A 77 522 77 HOH HOH . D 4 HOH A 78 523 78 HOH HOH . D 4 HOH A 79 524 79 HOH HOH . D 4 HOH A 80 525 80 HOH HOH . D 4 HOH A 81 526 81 HOH HOH . D 4 HOH A 82 527 82 HOH HOH . D 4 HOH A 83 528 83 HOH HOH . D 4 HOH A 84 529 84 HOH HOH . D 4 HOH A 85 530 85 HOH HOH . D 4 HOH A 86 531 86 HOH HOH . D 4 HOH A 87 532 87 HOH HOH . D 4 HOH A 88 533 88 HOH HOH . D 4 HOH A 89 534 89 HOH HOH . D 4 HOH A 90 535 90 HOH HOH . D 4 HOH A 91 536 91 HOH HOH . D 4 HOH A 92 537 92 HOH HOH . D 4 HOH A 93 538 93 HOH HOH . D 4 HOH A 94 539 94 HOH HOH . D 4 HOH A 95 540 95 HOH HOH . D 4 HOH A 96 541 96 HOH HOH . D 4 HOH A 97 542 97 HOH HOH . D 4 HOH A 98 543 98 HOH HOH . D 4 HOH A 99 544 99 HOH HOH . D 4 HOH A 100 545 100 HOH HOH . D 4 HOH A 101 546 101 HOH HOH . D 4 HOH A 102 547 102 HOH HOH . D 4 HOH A 103 548 103 HOH HOH . D 4 HOH A 104 549 104 HOH HOH . D 4 HOH A 105 550 105 HOH HOH . D 4 HOH A 106 551 106 HOH HOH . D 4 HOH A 107 552 107 HOH HOH . D 4 HOH A 108 553 108 HOH HOH . D 4 HOH A 109 554 109 HOH HOH . D 4 HOH A 110 555 110 HOH HOH . D 4 HOH A 111 556 111 HOH HOH . D 4 HOH A 112 557 112 HOH HOH . D 4 HOH A 113 558 113 HOH HOH . D 4 HOH A 114 559 114 HOH HOH . D 4 HOH A 115 560 115 HOH HOH . D 4 HOH A 116 561 116 HOH HOH . D 4 HOH A 117 562 117 HOH HOH . D 4 HOH A 118 563 118 HOH HOH . D 4 HOH A 119 564 119 HOH HOH . D 4 HOH A 120 565 120 HOH HOH . D 4 HOH A 121 566 121 HOH HOH . D 4 HOH A 122 567 122 HOH HOH . D 4 HOH A 123 568 123 HOH HOH . D 4 HOH A 124 569 124 HOH HOH . D 4 HOH A 125 570 125 HOH HOH . D 4 HOH A 126 571 126 HOH HOH . D 4 HOH A 127 572 127 HOH HOH . D 4 HOH A 128 573 128 HOH HOH . D 4 HOH A 129 574 129 HOH HOH . D 4 HOH A 130 575 130 HOH HOH . D 4 HOH A 131 576 131 HOH HOH . D 4 HOH A 132 577 132 HOH HOH . D 4 HOH A 133 578 133 HOH HOH . D 4 HOH A 134 579 134 HOH HOH . D 4 HOH A 135 580 135 HOH HOH . D 4 HOH A 136 581 136 HOH HOH . D 4 HOH A 137 582 137 HOH HOH . D 4 HOH A 138 583 138 HOH HOH . D 4 HOH A 139 584 139 HOH HOH . D 4 HOH A 140 585 140 HOH HOH . D 4 HOH A 141 586 141 HOH HOH . D 4 HOH A 142 587 142 HOH HOH . D 4 HOH A 143 588 143 HOH HOH . D 4 HOH A 144 589 144 HOH HOH . D 4 HOH A 145 590 145 HOH HOH . D 4 HOH A 146 591 146 HOH HOH . D 4 HOH A 147 592 147 HOH HOH . D 4 HOH A 148 593 148 HOH HOH . D 4 HOH A 149 594 149 HOH HOH . D 4 HOH A 150 595 150 HOH HOH . D 4 HOH A 151 596 151 HOH HOH . D 4 HOH A 152 597 152 HOH HOH . D 4 HOH A 153 598 153 HOH HOH . D 4 HOH A 154 599 154 HOH HOH . D 4 HOH A 155 600 155 HOH HOH . D 4 HOH A 156 601 156 HOH HOH . D 4 HOH A 157 602 157 HOH HOH . D 4 HOH A 158 603 158 HOH HOH . D 4 HOH A 159 604 159 HOH HOH . D 4 HOH A 160 605 160 HOH HOH . D 4 HOH A 161 606 161 HOH HOH . D 4 HOH A 162 607 162 HOH HOH . D 4 HOH A 163 608 163 HOH HOH . D 4 HOH A 164 609 164 HOH HOH . D 4 HOH A 165 610 165 HOH HOH . D 4 HOH A 166 611 166 HOH HOH . D 4 HOH A 167 612 167 HOH HOH . D 4 HOH A 168 613 168 HOH HOH . D 4 HOH A 169 614 169 HOH HOH . D 4 HOH A 170 615 170 HOH HOH . D 4 HOH A 171 616 171 HOH HOH . D 4 HOH A 172 617 172 HOH HOH . D 4 HOH A 173 618 173 HOH HOH . D 4 HOH A 174 619 174 HOH HOH . D 4 HOH A 175 620 175 HOH HOH . D 4 HOH A 176 621 176 HOH HOH . D 4 HOH A 177 622 177 HOH HOH . D 4 HOH A 178 623 178 HOH HOH . D 4 HOH A 179 624 179 HOH HOH . D 4 HOH A 180 625 180 HOH HOH . D 4 HOH A 181 626 181 HOH HOH . D 4 HOH A 182 627 182 HOH HOH . D 4 HOH A 183 628 183 HOH HOH . D 4 HOH A 184 629 184 HOH HOH . D 4 HOH A 185 630 185 HOH HOH . D 4 HOH A 186 631 186 HOH HOH . D 4 HOH A 187 632 187 HOH HOH . D 4 HOH A 188 633 188 HOH HOH . D 4 HOH A 189 634 189 HOH HOH . D 4 HOH A 190 635 190 HOH HOH . D 4 HOH A 191 636 191 HOH HOH . D 4 HOH A 192 637 192 HOH HOH . D 4 HOH A 193 638 193 HOH HOH . D 4 HOH A 194 639 194 HOH HOH . D 4 HOH A 195 640 195 HOH HOH . D 4 HOH A 196 641 196 HOH HOH . D 4 HOH A 197 642 197 HOH HOH . D 4 HOH A 198 643 198 HOH HOH . D 4 HOH A 199 644 199 HOH HOH . D 4 HOH A 200 645 200 HOH HOH . D 4 HOH A 201 646 201 HOH HOH . D 4 HOH A 202 647 202 HOH HOH . D 4 HOH A 203 648 203 HOH HOH . D 4 HOH A 204 649 204 HOH HOH . D 4 HOH A 205 650 205 HOH HOH . D 4 HOH A 206 651 206 HOH HOH . D 4 HOH A 207 652 207 HOH HOH . D 4 HOH A 208 653 208 HOH HOH . D 4 HOH A 209 654 209 HOH HOH . D 4 HOH A 210 655 210 HOH HOH . D 4 HOH A 211 656 211 HOH HOH . D 4 HOH A 212 657 212 HOH HOH . D 4 HOH A 213 658 213 HOH HOH . D 4 HOH A 214 659 214 HOH HOH . D 4 HOH A 215 660 215 HOH HOH . D 4 HOH A 216 661 216 HOH HOH . D 4 HOH A 217 662 217 HOH HOH . D 4 HOH A 218 663 218 HOH HOH . D 4 HOH A 219 664 219 HOH HOH . D 4 HOH A 220 665 220 HOH HOH . D 4 HOH A 221 666 221 HOH HOH . D 4 HOH A 222 667 222 HOH HOH . D 4 HOH A 223 668 223 HOH HOH . D 4 HOH A 224 669 224 HOH HOH . D 4 HOH A 225 670 225 HOH HOH . D 4 HOH A 226 671 226 HOH HOH . D 4 HOH A 227 672 227 HOH HOH . D 4 HOH A 228 673 228 HOH HOH . D 4 HOH A 229 674 229 HOH HOH . D 4 HOH A 230 675 230 HOH HOH . D 4 HOH A 231 676 231 HOH HOH . D 4 HOH A 232 677 232 HOH HOH . D 4 HOH A 233 678 233 HOH HOH . D 4 HOH A 234 679 234 HOH HOH . D 4 HOH A 235 680 235 HOH HOH . D 4 HOH A 236 681 236 HOH HOH . D 4 HOH A 237 682 237 HOH HOH . D 4 HOH A 238 683 238 HOH HOH . D 4 HOH A 239 684 239 HOH HOH . D 4 HOH A 240 685 240 HOH HOH . D 4 HOH A 241 686 241 HOH HOH . D 4 HOH A 242 687 242 HOH HOH . D 4 HOH A 243 688 243 HOH HOH . D 4 HOH A 244 689 244 HOH HOH . D 4 HOH A 245 690 245 HOH HOH . D 4 HOH A 246 691 246 HOH HOH . D 4 HOH A 247 692 247 HOH HOH . D 4 HOH A 248 693 248 HOH HOH . D 4 HOH A 249 694 249 HOH HOH . D 4 HOH A 250 695 250 HOH HOH . D 4 HOH A 251 696 251 HOH HOH . D 4 HOH A 252 697 252 HOH HOH . D 4 HOH A 253 698 253 HOH HOH . D 4 HOH A 254 699 254 HOH HOH . D 4 HOH A 255 700 255 HOH HOH . D 4 HOH A 256 701 256 HOH HOH . D 4 HOH A 257 702 257 HOH HOH . D 4 HOH A 258 703 258 HOH HOH . D 4 HOH A 259 704 259 HOH HOH . D 4 HOH A 260 705 260 HOH HOH . D 4 HOH A 261 706 261 HOH HOH . D 4 HOH A 262 707 262 HOH HOH . D 4 HOH A 263 708 263 HOH HOH . D 4 HOH A 264 709 264 HOH HOH . D 4 HOH A 265 710 266 HOH HOH . D 4 HOH A 266 711 267 HOH HOH . D 4 HOH A 267 712 268 HOH HOH . D 4 HOH A 268 713 269 HOH HOH . D 4 HOH A 269 714 270 HOH HOH . D 4 HOH A 270 715 271 HOH HOH . D 4 HOH A 271 716 272 HOH HOH . D 4 HOH A 272 717 273 HOH HOH . D 4 HOH A 273 718 274 HOH HOH . D 4 HOH A 274 719 275 HOH HOH . D 4 HOH A 275 720 276 HOH HOH . D 4 HOH A 276 721 277 HOH HOH . D 4 HOH A 277 722 278 HOH HOH . D 4 HOH A 278 723 279 HOH HOH . D 4 HOH A 279 724 280 HOH HOH . D 4 HOH A 280 725 281 HOH HOH . D 4 HOH A 281 726 282 HOH HOH . D 4 HOH A 282 727 283 HOH HOH . D 4 HOH A 283 728 284 HOH HOH . D 4 HOH A 284 729 285 HOH HOH . D 4 HOH A 285 730 286 HOH HOH . D 4 HOH A 286 731 287 HOH HOH . D 4 HOH A 287 732 288 HOH HOH . D 4 HOH A 288 733 289 HOH HOH . D 4 HOH A 289 734 290 HOH HOH . D 4 HOH A 290 735 291 HOH HOH . D 4 HOH A 291 736 292 HOH HOH . D 4 HOH A 292 737 293 HOH HOH . D 4 HOH A 293 738 294 HOH HOH . D 4 HOH A 294 739 296 HOH HOH . D 4 HOH A 295 740 297 HOH HOH . D 4 HOH A 296 741 298 HOH HOH . D 4 HOH A 297 742 299 HOH HOH . D 4 HOH A 298 743 300 HOH HOH . D 4 HOH A 299 744 301 HOH HOH . D 4 HOH A 300 745 302 HOH HOH . D 4 HOH A 301 746 303 HOH HOH . D 4 HOH A 302 747 304 HOH HOH . D 4 HOH A 303 748 305 HOH HOH . D 4 HOH A 304 749 306 HOH HOH . D 4 HOH A 305 750 307 HOH HOH . D 4 HOH A 306 751 308 HOH HOH . D 4 HOH A 307 752 309 HOH HOH . D 4 HOH A 308 753 310 HOH HOH . D 4 HOH A 309 754 311 HOH HOH . D 4 HOH A 310 755 312 HOH HOH . D 4 HOH A 311 756 313 HOH HOH . D 4 HOH A 312 757 314 HOH HOH . D 4 HOH A 313 758 315 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MRD . . . C 3 -5.272 33.762 25.263 1 25.18 ? C1 MRD 445 A 1 HETATM 2 C C2 MRD . . . C 3 -5.93 33.812 26.639 1 32.36 ? C2 MRD 445 A 1 HETATM 3 O O2 MRD . . . C 3 -6.324 32.486 27.069 1 34.18 ? O2 MRD 445 A 1 HETATM 4 C CM MRD . . . C 3 -4.887 34.317 27.628 1 32.73 ? CM MRD 445 A 1 HETATM 5 C C3 MRD . . . C 3 -7.151 34.733 26.651 1 35.3 ? C3 MRD 445 A 1 HETATM 6 C C4 MRD . . . C 3 -8.423 34.254 25.933 1 43.07 ? C4 MRD 445 A 1 HETATM 7 O O4 MRD . . . C 3 -9.475 34.132 26.869 1 55.63 ? O4 MRD 445 A 1 HETATM 8 C C5 MRD . . . C 3 -8.311 32.926 25.192 1 37.04 ? C5 MRD 445 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #