data_3G6G # _model_server_result.job_id KGNscKHpruYH_eHSctWqig _model_server_result.datetime_utc '2024-11-22 00:49:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g6g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1003}' # _entry.id 3G6G # _exptl.entry_id 3G6G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 102.5 _cell.angle_beta 89.4 _cell.angle_gamma 90.29 _cell.entry_id 3G6G _cell.length_a 41.885 _cell.length_b 63.855 _cell.length_c 76.622 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G6G _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 217 n n C1 C2 GOL sing 218 n n C1 H11 GOL sing 219 n n C1 H12 GOL sing 220 n n O1 HO1 GOL sing 221 n n C2 O2 GOL sing 222 n n C2 C3 GOL sing 223 n n C2 H2 GOL sing 224 n n O2 HO2 GOL sing 225 n n C3 O3 GOL sing 226 n n C3 H31 GOL sing 227 n n C3 H32 GOL sing 228 n n O3 HO3 GOL sing 229 n n # _atom_sites.entry_id 3G6G _atom_sites.fract_transf_matrix[1][1] 0.023875 _atom_sites.fract_transf_matrix[1][2] 0.000123 _atom_sites.fract_transf_matrix[1][3] -0.00023 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015661 _atom_sites.fract_transf_matrix[2][3] 0.003471 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G6G A 1 1 1 G6G MOL . D 3 GOL A 1 1003 1003 GOL GOL . E 2 G6G B 1 2 2 G6G MOL . F 3 GOL B 1 1002 1002 GOL GOL . G 4 HOH A 1 2 2 HOH HOH . G 4 HOH A 2 3 3 HOH HOH . G 4 HOH A 3 4 4 HOH HOH . G 4 HOH A 4 5 5 HOH HOH . G 4 HOH A 5 7 7 HOH HOH . G 4 HOH A 6 8 8 HOH HOH . G 4 HOH A 7 14 14 HOH HOH . G 4 HOH A 8 15 15 HOH HOH . G 4 HOH A 9 16 16 HOH HOH . G 4 HOH A 10 17 17 HOH HOH . G 4 HOH A 11 19 19 HOH HOH . G 4 HOH A 12 20 20 HOH HOH . G 4 HOH A 13 21 21 HOH HOH . G 4 HOH A 14 22 22 HOH HOH . G 4 HOH A 15 24 24 HOH HOH . G 4 HOH A 16 25 25 HOH HOH . G 4 HOH A 17 26 26 HOH HOH . G 4 HOH A 18 32 32 HOH HOH . G 4 HOH A 19 33 33 HOH HOH . G 4 HOH A 20 35 35 HOH HOH . G 4 HOH A 21 36 36 HOH HOH . G 4 HOH A 22 38 38 HOH HOH . G 4 HOH A 23 39 39 HOH HOH . G 4 HOH A 24 40 40 HOH HOH . G 4 HOH A 25 41 41 HOH HOH . G 4 HOH A 26 42 42 HOH HOH . G 4 HOH A 27 43 43 HOH HOH . G 4 HOH A 28 44 44 HOH HOH . G 4 HOH A 29 45 45 HOH HOH . G 4 HOH A 30 46 46 HOH HOH . G 4 HOH A 31 47 47 HOH HOH . G 4 HOH A 32 49 49 HOH HOH . G 4 HOH A 33 50 50 HOH HOH . G 4 HOH A 34 51 51 HOH HOH . G 4 HOH A 35 54 54 HOH HOH . G 4 HOH A 36 55 55 HOH HOH . G 4 HOH A 37 56 56 HOH HOH . G 4 HOH A 38 57 57 HOH HOH . G 4 HOH A 39 58 58 HOH HOH . G 4 HOH A 40 59 59 HOH HOH . H 4 HOH B 1 1 1 HOH HOH . H 4 HOH B 2 6 6 HOH HOH . H 4 HOH B 3 9 9 HOH HOH . H 4 HOH B 4 10 10 HOH HOH . H 4 HOH B 5 11 11 HOH HOH . H 4 HOH B 6 12 12 HOH HOH . H 4 HOH B 7 13 13 HOH HOH . H 4 HOH B 8 18 18 HOH HOH . H 4 HOH B 9 23 23 HOH HOH . H 4 HOH B 10 27 27 HOH HOH . H 4 HOH B 11 28 28 HOH HOH . H 4 HOH B 12 29 29 HOH HOH . H 4 HOH B 13 30 30 HOH HOH . H 4 HOH B 14 34 34 HOH HOH . H 4 HOH B 15 37 37 HOH HOH . H 4 HOH B 16 48 48 HOH HOH . H 4 HOH B 17 52 52 HOH HOH . H 4 HOH B 18 53 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 0.541 44.778 -13.387 1 56.73 ? C1 GOL 1003 A 1 HETATM 2 O O1 GOL . . . D 3 0.029 43.922 -12.384 1 56.05 ? O1 GOL 1003 A 1 HETATM 3 C C2 GOL . . . D 3 1.099 43.891 -14.484 1 57.44 ? C2 GOL 1003 A 1 HETATM 4 O O2 GOL . . . D 3 0.058 43.421 -15.313 1 58.85 ? O2 GOL 1003 A 1 HETATM 5 C C3 GOL . . . D 3 2.192 44.601 -15.262 1 55.79 ? C3 GOL 1003 A 1 HETATM 6 O O3 GOL . . . D 3 2.341 43.995 -16.52 1 56.94 ? O3 GOL 1003 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #