data_3G7J # _model_server_result.job_id zAGF2z79skqO8o1QWpUV4g _model_server_result.datetime_utc '2024-10-19 06:28:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g7j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":220}' # _entry.id 3G7J # _exptl.entry_id 3G7J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.491 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-HEXYLGLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G7J _cell.length_a 83.988 _cell.length_b 83.988 _cell.length_c 129.511 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G7J _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C16 H30 N3 O6 S 1' _chem_comp.formula_weight 392.491 _chem_comp.id GTX _chem_comp.mon_nstd_flag . _chem_comp.name S-HEXYLGLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GTX sing 129 n n N1 HN11 GTX sing 130 n n N1 HN12 GTX sing 131 n n N1 HN13 GTX sing 132 n n CA1 C1 GTX sing 133 n n CA1 CB1 GTX sing 134 n n CA1 HA1 GTX sing 135 n n C1 O11 GTX doub 136 n n C1 O12 GTX sing 137 n n O12 HO2 GTX sing 138 n n CB1 CG1 GTX sing 139 n n CB1 HB11 GTX sing 140 n n CB1 HB12 GTX sing 141 n n CG1 CD1 GTX sing 142 n n CG1 HG11 GTX sing 143 n n CG1 HG12 GTX sing 144 n n CD1 OE1 GTX doub 145 n n CD1 N2 GTX sing 146 n n N2 CA2 GTX sing 147 n n N2 HN2 GTX sing 148 n n CA2 C2 GTX sing 149 n n CA2 CB2 GTX sing 150 n n CA2 HA2 GTX sing 151 n n C2 O2 GTX doub 152 n n C2 N3 GTX sing 153 n n CB2 SG2 GTX sing 154 n n CB2 HB21 GTX sing 155 n n CB2 HB22 GTX sing 156 n n SG2 C1S GTX sing 157 n n C1S C2S GTX sing 158 n n C1S HS11 GTX sing 159 n n C1S HS12 GTX sing 160 n n C2S C3S GTX sing 161 n n C2S HS21 GTX sing 162 n n C2S HS22 GTX sing 163 n n C3S C4S GTX sing 164 n n C3S HS31 GTX sing 165 n n C3S HS32 GTX sing 166 n n C4S C5S GTX sing 167 n n C4S HS41 GTX sing 168 n n C4S HS42 GTX sing 169 n n C5S C6S GTX sing 170 n n C5S HS51 GTX sing 171 n n C5S HS52 GTX sing 172 n n C6S HS61 GTX sing 173 n n C6S HS62 GTX sing 174 n n C6S HS63 GTX sing 175 n n N3 CA3 GTX sing 176 n n N3 HN3 GTX sing 177 n n CA3 C3 GTX sing 178 n n CA3 HA31 GTX sing 179 n n CA3 HA32 GTX sing 180 n n C3 O31 GTX doub 181 n n C3 O32 GTX sing 182 n n O32 HO3 GTX sing 183 n n # _atom_sites.entry_id 3G7J _atom_sites.fract_transf_matrix[1][1] 0.011906 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GTX A 1 220 13 GTX GTX . D 2 GTX B 1 220 13 GTX GTX . E 3 HOH A 1 221 221 HOH HOH . E 3 HOH A 2 222 222 HOH HOH . E 3 HOH A 3 223 223 HOH HOH . E 3 HOH A 4 225 2 HOH HOH . E 3 HOH A 5 226 3 HOH HOH . E 3 HOH A 6 228 5 HOH HOH . E 3 HOH A 7 229 6 HOH HOH . E 3 HOH A 8 232 9 HOH HOH . E 3 HOH A 9 233 10 HOH HOH . E 3 HOH A 10 234 11 HOH HOH . E 3 HOH A 11 237 14 HOH HOH . E 3 HOH A 12 241 18 HOH HOH . E 3 HOH A 13 247 24 HOH HOH . E 3 HOH A 14 248 25 HOH HOH . E 3 HOH A 15 250 27 HOH HOH . E 3 HOH A 16 251 28 HOH HOH . E 3 HOH A 17 253 30 HOH HOH . E 3 HOH A 18 255 32 HOH HOH . E 3 HOH A 19 256 33 HOH HOH . E 3 HOH A 20 257 34 HOH HOH . E 3 HOH A 21 260 37 HOH HOH . E 3 HOH A 22 265 42 HOH HOH . E 3 HOH A 23 266 43 HOH HOH . E 3 HOH A 24 267 44 HOH HOH . E 3 HOH A 25 268 45 HOH HOH . E 3 HOH A 26 270 47 HOH HOH . E 3 HOH A 27 274 51 HOH HOH . E 3 HOH A 28 278 55 HOH HOH . E 3 HOH A 29 282 59 HOH HOH . E 3 HOH A 30 283 60 HOH HOH . E 3 HOH A 31 286 63 HOH HOH . E 3 HOH A 32 288 65 HOH HOH . E 3 HOH A 33 289 66 HOH HOH . E 3 HOH A 34 290 67 HOH HOH . E 3 HOH A 35 291 68 HOH HOH . E 3 HOH A 36 293 70 HOH HOH . E 3 HOH A 37 294 71 HOH HOH . E 3 HOH A 38 295 72 HOH HOH . E 3 HOH A 39 296 74 HOH HOH . E 3 HOH A 40 297 75 HOH HOH . E 3 HOH A 41 300 78 HOH HOH . E 3 HOH A 42 301 79 HOH HOH . E 3 HOH A 43 303 81 HOH HOH . E 3 HOH A 44 304 82 HOH HOH . E 3 HOH A 45 306 84 HOH HOH . E 3 HOH A 46 308 86 HOH HOH . E 3 HOH A 47 309 87 HOH HOH . E 3 HOH A 48 310 88 HOH HOH . E 3 HOH A 49 311 89 HOH HOH . E 3 HOH A 50 313 91 HOH HOH . E 3 HOH A 51 314 92 HOH HOH . E 3 HOH A 52 319 97 HOH HOH . E 3 HOH A 53 320 98 HOH HOH . E 3 HOH A 54 321 99 HOH HOH . E 3 HOH A 55 322 100 HOH HOH . E 3 HOH A 56 323 101 HOH HOH . E 3 HOH A 57 326 104 HOH HOH . E 3 HOH A 58 327 105 HOH HOH . E 3 HOH A 59 328 106 HOH HOH . E 3 HOH A 60 330 108 HOH HOH . E 3 HOH A 61 331 109 HOH HOH . E 3 HOH A 62 335 113 HOH HOH . E 3 HOH A 63 337 115 HOH HOH . E 3 HOH A 64 338 118 HOH HOH . E 3 HOH A 65 339 120 HOH HOH . E 3 HOH A 66 340 121 HOH HOH . E 3 HOH A 67 341 122 HOH HOH . E 3 HOH A 68 342 127 HOH HOH . E 3 HOH A 69 343 128 HOH HOH . E 3 HOH A 70 344 129 HOH HOH . E 3 HOH A 71 345 130 HOH HOH . E 3 HOH A 72 346 132 HOH HOH . E 3 HOH A 73 347 135 HOH HOH . E 3 HOH A 74 348 136 HOH HOH . E 3 HOH A 75 349 137 HOH HOH . E 3 HOH A 76 351 139 HOH HOH . E 3 HOH A 77 352 140 HOH HOH . E 3 HOH A 78 355 143 HOH HOH . E 3 HOH A 79 356 145 HOH HOH . E 3 HOH A 80 357 146 HOH HOH . E 3 HOH A 81 361 151 HOH HOH . E 3 HOH A 82 362 152 HOH HOH . E 3 HOH A 83 363 154 HOH HOH . E 3 HOH A 84 364 156 HOH HOH . E 3 HOH A 85 365 157 HOH HOH . E 3 HOH A 86 366 158 HOH HOH . E 3 HOH A 87 367 159 HOH HOH . E 3 HOH A 88 368 160 HOH HOH . E 3 HOH A 89 369 161 HOH HOH . E 3 HOH A 90 370 162 HOH HOH . E 3 HOH A 91 372 164 HOH HOH . E 3 HOH A 92 374 166 HOH HOH . E 3 HOH A 93 375 167 HOH HOH . E 3 HOH A 94 376 168 HOH HOH . E 3 HOH A 95 377 169 HOH HOH . E 3 HOH A 96 378 170 HOH HOH . E 3 HOH A 97 379 171 HOH HOH . E 3 HOH A 98 382 174 HOH HOH . E 3 HOH A 99 384 176 HOH HOH . E 3 HOH A 100 386 178 HOH HOH . E 3 HOH A 101 387 179 HOH HOH . E 3 HOH A 102 388 180 HOH HOH . E 3 HOH A 103 393 186 HOH HOH . E 3 HOH A 104 394 187 HOH HOH . E 3 HOH A 105 396 189 HOH HOH . E 3 HOH A 106 397 190 HOH HOH . E 3 HOH A 107 398 191 HOH HOH . E 3 HOH A 108 402 197 HOH HOH . E 3 HOH A 109 403 198 HOH HOH . E 3 HOH A 110 404 199 HOH HOH . E 3 HOH A 111 406 202 HOH HOH . E 3 HOH A 112 410 207 HOH HOH . E 3 HOH A 113 411 208 HOH HOH . E 3 HOH A 114 412 209 HOH HOH . E 3 HOH A 115 416 214 HOH HOH . E 3 HOH A 116 417 215 HOH HOH . E 3 HOH A 117 418 217 HOH HOH . E 3 HOH A 118 419 218 HOH HOH . F 3 HOH B 1 221 116 HOH HOH . F 3 HOH B 2 222 119 HOH HOH . F 3 HOH B 3 223 123 HOH HOH . F 3 HOH B 4 224 1 HOH HOH . F 3 HOH B 5 225 126 HOH HOH . F 3 HOH B 6 226 133 HOH HOH . F 3 HOH B 7 227 4 HOH HOH . F 3 HOH B 8 228 216 HOH HOH . F 3 HOH B 9 229 220 HOH HOH . F 3 HOH B 10 230 7 HOH HOH . F 3 HOH B 11 231 8 HOH HOH . F 3 HOH B 12 232 125 HOH HOH . F 3 HOH B 13 233 134 HOH HOH . F 3 HOH B 14 235 12 HOH HOH . F 3 HOH B 15 236 13 HOH HOH . F 3 HOH B 16 238 15 HOH HOH . F 3 HOH B 17 239 16 HOH HOH . F 3 HOH B 18 240 17 HOH HOH . F 3 HOH B 19 242 19 HOH HOH . F 3 HOH B 20 243 20 HOH HOH . F 3 HOH B 21 244 21 HOH HOH . F 3 HOH B 22 245 22 HOH HOH . F 3 HOH B 23 246 23 HOH HOH . F 3 HOH B 24 249 26 HOH HOH . F 3 HOH B 25 252 29 HOH HOH . F 3 HOH B 26 254 31 HOH HOH . F 3 HOH B 27 258 35 HOH HOH . F 3 HOH B 28 259 36 HOH HOH . F 3 HOH B 29 261 38 HOH HOH . F 3 HOH B 30 262 39 HOH HOH . F 3 HOH B 31 263 40 HOH HOH . F 3 HOH B 32 264 41 HOH HOH . F 3 HOH B 33 269 46 HOH HOH . F 3 HOH B 34 271 48 HOH HOH . F 3 HOH B 35 272 49 HOH HOH . F 3 HOH B 36 273 50 HOH HOH . F 3 HOH B 37 275 52 HOH HOH . F 3 HOH B 38 276 53 HOH HOH . F 3 HOH B 39 277 54 HOH HOH . F 3 HOH B 40 279 56 HOH HOH . F 3 HOH B 41 280 57 HOH HOH . F 3 HOH B 42 281 58 HOH HOH . F 3 HOH B 43 284 61 HOH HOH . F 3 HOH B 44 285 62 HOH HOH . F 3 HOH B 45 287 64 HOH HOH . F 3 HOH B 46 292 69 HOH HOH . F 3 HOH B 47 298 76 HOH HOH . F 3 HOH B 48 299 77 HOH HOH . F 3 HOH B 49 302 80 HOH HOH . F 3 HOH B 50 305 83 HOH HOH . F 3 HOH B 51 307 85 HOH HOH . F 3 HOH B 52 312 90 HOH HOH . F 3 HOH B 53 315 93 HOH HOH . F 3 HOH B 54 316 94 HOH HOH . F 3 HOH B 55 317 95 HOH HOH . F 3 HOH B 56 318 96 HOH HOH . F 3 HOH B 57 324 102 HOH HOH . F 3 HOH B 58 325 103 HOH HOH . F 3 HOH B 59 329 107 HOH HOH . F 3 HOH B 60 332 110 HOH HOH . F 3 HOH B 61 333 111 HOH HOH . F 3 HOH B 62 334 112 HOH HOH . F 3 HOH B 63 336 114 HOH HOH . F 3 HOH B 64 350 138 HOH HOH . F 3 HOH B 65 353 141 HOH HOH . F 3 HOH B 66 354 142 HOH HOH . F 3 HOH B 67 358 147 HOH HOH . F 3 HOH B 68 359 148 HOH HOH . F 3 HOH B 69 360 149 HOH HOH . F 3 HOH B 70 371 163 HOH HOH . F 3 HOH B 71 373 165 HOH HOH . F 3 HOH B 72 380 172 HOH HOH . F 3 HOH B 73 381 173 HOH HOH . F 3 HOH B 74 383 175 HOH HOH . F 3 HOH B 75 385 177 HOH HOH . F 3 HOH B 76 389 181 HOH HOH . F 3 HOH B 77 390 182 HOH HOH . F 3 HOH B 78 391 183 HOH HOH . F 3 HOH B 79 392 184 HOH HOH . F 3 HOH B 80 395 188 HOH HOH . F 3 HOH B 81 399 192 HOH HOH . F 3 HOH B 82 400 193 HOH HOH . F 3 HOH B 83 401 194 HOH HOH . F 3 HOH B 84 405 200 HOH HOH . F 3 HOH B 85 407 204 HOH HOH . F 3 HOH B 86 408 205 HOH HOH . F 3 HOH B 87 409 206 HOH HOH . F 3 HOH B 88 413 210 HOH HOH . F 3 HOH B 89 414 211 HOH HOH . F 3 HOH B 90 415 212 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTX . . . C 2 17.956 -16.464 -2.89 1 28.59 ? N1 GTX 220 A 1 HETATM 2 C CA1 GTX . . . C 2 18.088 -15.107 -2.391 1 28.4 ? CA1 GTX 220 A 1 HETATM 3 C C1 GTX . . . C 2 17.339 -14.962 -1.102 1 28.29 ? C1 GTX 220 A 1 HETATM 4 O O11 GTX . . . C 2 17.7 -14.122 -0.25 1 27.44 ? O11 GTX 220 A 1 HETATM 5 O O12 GTX . . . C 2 16.332 -15.669 -0.885 1 28.5 ? O12 GTX 220 A 1 HETATM 6 C CB1 GTX . . . C 2 17.482 -14.145 -3.401 1 28.38 ? CB1 GTX 220 A 1 HETATM 7 C CG1 GTX . . . C 2 18.088 -12.753 -3.284 1 29.51 ? CG1 GTX 220 A 1 HETATM 8 C CD1 GTX . . . C 2 17.544 -11.879 -4.39 1 30.75 ? CD1 GTX 220 A 1 HETATM 9 O OE1 GTX . . . C 2 16.907 -12.448 -5.519 1 30.03 ? OE1 GTX 220 A 1 HETATM 10 N N2 GTX . . . C 2 17.702 -10.571 -4.204 1 31.53 ? N2 GTX 220 A 1 HETATM 11 C CA2 GTX . . . C 2 17.623 -9.606 -5.282 1 32.95 ? CA2 GTX 220 A 1 HETATM 12 C C2 GTX . . . C 2 18.863 -8.762 -5.346 1 32.97 ? C2 GTX 220 A 1 HETATM 13 O O2 GTX . . . C 2 19.447 -8.275 -4.161 1 32.85 ? O2 GTX 220 A 1 HETATM 14 C CB2 GTX . . . C 2 16.4 -8.719 -5.089 1 34.36 ? CB2 GTX 220 A 1 HETATM 15 S SG2 GTX . . . C 2 14.875 -9.622 -4.702 1 36.42 ? SG2 GTX 220 A 1 HETATM 16 C C1S GTX . . . C 2 14.013 -8.868 -6.108 1 38.24 ? C1S GTX 220 A 1 HETATM 17 C C2S GTX . . . C 2 13.703 -7.394 -5.876 1 39.74 ? C2S GTX 220 A 1 HETATM 18 C C3S GTX . . . C 2 12.575 -6.902 -6.771 1 41.37 ? C3S GTX 220 A 1 HETATM 19 C C4S GTX . . . C 2 12.303 -5.421 -6.525 1 42.05 ? C4S GTX 220 A 1 HETATM 20 C C5S GTX . . . C 2 11.157 -5.225 -5.539 1 42.66 ? C5S GTX 220 A 1 HETATM 21 C C6S GTX . . . C 2 11.101 -3.784 -5.045 1 43.33 ? C6S GTX 220 A 1 HETATM 22 N N3 GTX . . . C 2 19.359 -8.519 -6.558 1 33.98 ? N3 GTX 220 A 1 HETATM 23 C CA3 GTX . . . C 2 20.517 -7.672 -6.792 1 34.06 ? CA3 GTX 220 A 1 HETATM 24 C C3 GTX . . . C 2 21.778 -8.478 -6.997 1 34.38 ? C3 GTX 220 A 1 HETATM 25 O O31 GTX . . . C 2 22.805 -7.943 -7.473 1 34.87 ? O31 GTX 220 A 1 HETATM 26 O O32 GTX . . . C 2 21.822 -9.689 -6.69 1 34.6 ? O32 GTX 220 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #