data_3G7L # _model_server_result.job_id 6KbyPl5wIWBsvHjA7WG-7g _model_server_result.datetime_utc '2024-12-26 23:23:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g7l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3G7L # _exptl.entry_id 3G7L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G7L _cell.length_a 41.56 _cell.length_b 41.56 _cell.length_c 87.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G7L _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 8 P ARG 8 1_555 B N M3L 9 P M3L 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B C M3L 9 P M3L 9 1_555 B N SER 10 P SER 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A OD2 ASP 37 A ASP 51 1_555 D ZN ZN . A ZN 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 3G7L _atom_sites.fract_transf_matrix[1][1] 0.024062 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011444 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACY A 1 1 1 ACY ACY . D 4 ZN A 1 76 1 ZN ZN . E 4 ZN A 1 2 2 ZN ZN . F 4 ZN A 1 3 3 ZN ZN . G 4 ZN A 1 4 4 ZN ZN . H 5 HOH A 1 5 5 HOH HOH . H 5 HOH A 2 6 6 HOH HOH . H 5 HOH A 3 8 8 HOH HOH . H 5 HOH A 4 9 9 HOH HOH . H 5 HOH A 5 10 10 HOH HOH . H 5 HOH A 6 12 12 HOH HOH . H 5 HOH A 7 77 2 HOH HOH . H 5 HOH A 8 78 3 HOH HOH . H 5 HOH A 9 79 4 HOH HOH . H 5 HOH A 10 80 15 HOH HOH . H 5 HOH A 11 81 22 HOH HOH . H 5 HOH A 12 82 27 HOH HOH . H 5 HOH A 13 83 30 HOH HOH . H 5 HOH A 14 84 31 HOH HOH . H 5 HOH A 15 85 33 HOH HOH . H 5 HOH A 16 86 34 HOH HOH . H 5 HOH A 17 87 37 HOH HOH . H 5 HOH A 18 88 41 HOH HOH . H 5 HOH A 19 89 49 HOH HOH . H 5 HOH A 20 90 52 HOH HOH . H 5 HOH A 21 91 57 HOH HOH . H 5 HOH A 22 92 58 HOH HOH . H 5 HOH A 23 93 59 HOH HOH . H 5 HOH A 24 94 60 HOH HOH . H 5 HOH A 25 95 61 HOH HOH . H 5 HOH A 26 96 62 HOH HOH . H 5 HOH A 27 97 63 HOH HOH . I 5 HOH P 1 26 26 HOH HOH . I 5 HOH P 2 56 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . C 3 -11.097 -12.798 2.956 1 55.27 ? C ACY 1 A 1 HETATM 2 O O ACY . . . C 3 -11.18 -13.166 1.769 1 62.68 ? O ACY 1 A 1 HETATM 3 O OXT ACY . . . C 3 -10.399 -11.828 3.316 1 46.74 ? OXT ACY 1 A 1 HETATM 4 C CH3 ACY . . . C 3 -11.859 -13.575 3.985 1 58.24 ? CH3 ACY 1 A 1 HETATM 5 H H1 ACY . . . C 3 -12.398 -14.39 3.5 1 69.07 ? H1 ACY 1 A 1 HETATM 6 H H2 ACY . . . C 3 -12.57 -12.917 4.485 1 69.07 ? H2 ACY 1 A 1 HETATM 7 H H3 ACY . . . C 3 -11.165 -13.985 4.718 1 69.07 ? H3 ACY 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #