data_3G8R # _model_server_result.job_id vq9ua_Fk49jTUzWURURMsw _model_server_result.datetime_utc '2024-12-26 11:42:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g8r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3G8R # _exptl.entry_id 3G8R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3G8R _cell.length_a 107.672 _cell.length_b 107.672 _cell.length_c 164.799 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 11 A GLU 11 1_555 A N MSE 12 A MSE 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 12 A MSE 12 1_555 A N ALA 13 A ALA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C HIS 16 A HIS 16 1_555 A N MSE 17 A MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 17 A MSE 17 1_555 A N GLY 18 A GLY 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 A C GLN 79 A GLN 79 1_555 A N MSE 80 A MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C MSE 80 A MSE 80 1_555 A N GLN 81 A GLN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 A C GLU 86 A GLU 86 1_555 A N MSE 87 A MSE 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 A C MSE 87 A MSE 87 1_555 A N LYS 88 A LYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 A C PHE 156 A PHE 156 1_555 A N MSE 157 A MSE 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MSE 157 A MSE 157 1_555 A N LEU 158 A LEU 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C ILE 166 A ILE 166 1_555 A N MSE 167 A MSE 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale12 A C MSE 167 A MSE 167 1_555 A N HIS 168 A HIS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? covale ? covale13 A C LEU 207 A LEU 207 1_555 A N MSE 208 A MSE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 A C MSE 208 A MSE 208 1_555 A N GLU 209 A GLU 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 A C ILE 211 A ILE 211 1_555 A N MSE 212 A MSE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale16 A C MSE 212 A MSE 212 1_555 A N LEU 213 A LEU 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale17 A C ALA 257 A ALA 257 1_555 A N MSE 258 A MSE 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale18 A C MSE 258 A MSE 258 1_555 A N LEU 259 A LEU 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale19 A C VAL 333 A VAL 333 1_555 A N MSE 334 A MSE 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale20 A C MSE 334 A MSE 334 1_555 A N ALA 335 A ALA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale21 B C GLU 11 B GLU 11 1_555 B N MSE 12 B MSE 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale22 B C MSE 12 B MSE 12 1_555 B N ALA 13 B ALA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale23 B C HIS 16 B HIS 16 1_555 B N MSE 17 B MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale24 B C MSE 17 B MSE 17 1_555 B N GLY 18 B GLY 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale25 B C GLN 79 B GLN 79 1_555 B N MSE 80 B MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale26 B C MSE 80 B MSE 80 1_555 B N GLN 81 B GLN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale27 B C GLU 86 B GLU 86 1_555 B N MSE 87 B MSE 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale28 B C MSE 87 B MSE 87 1_555 B N LYS 88 B LYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale29 B C PHE 156 B PHE 156 1_555 B N MSE 157 B MSE 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale30 B C MSE 157 B MSE 157 1_555 B N LEU 158 B LEU 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale31 B C ILE 166 B ILE 166 1_555 B N MSE 167 B MSE 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale32 B C MSE 167 B MSE 167 1_555 B N HIS 168 B HIS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale33 B C LEU 207 B LEU 207 1_555 B N MSE 208 B MSE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale34 B C MSE 208 B MSE 208 1_555 B N GLU 209 B GLU 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale35 B C ILE 211 B ILE 211 1_555 B N MSE 212 B MSE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale36 B C MSE 212 B MSE 212 1_555 B N LEU 213 B LEU 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale37 B C ALA 257 B ALA 257 1_555 B N MSE 258 B MSE 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale38 B C MSE 258 B MSE 258 1_555 B N LEU 259 B LEU 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale39 B C VAL 333 B VAL 333 1_555 B N MSE 334 B MSE 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale40 B C MSE 334 B MSE 334 1_555 B N ALA 335 B ALA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 B NE2 HIS 225 B HIS 225 1_555 D ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3G8R _atom_sites.fract_transf_matrix[1][1] 0.009287 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009287 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 501 501 ZN ZN . D 2 ZN B 1 501 501 ZN ZN . E 3 HOH B 1 351 3 HOH HOH . E 3 HOH B 2 352 5 HOH HOH . E 3 HOH B 3 353 6 HOH HOH . E 3 HOH B 4 354 7 HOH HOH . E 3 HOH B 5 355 8 HOH HOH . E 3 HOH B 6 356 11 HOH HOH . E 3 HOH B 7 357 12 HOH HOH . E 3 HOH B 8 358 13 HOH HOH . E 3 HOH B 9 359 16 HOH HOH . E 3 HOH B 10 360 17 HOH HOH . E 3 HOH B 11 361 18 HOH HOH . E 3 HOH B 12 362 20 HOH HOH . E 3 HOH B 13 363 21 HOH HOH . E 3 HOH B 14 364 23 HOH HOH . E 3 HOH B 15 365 24 HOH HOH . E 3 HOH B 16 366 25 HOH HOH . E 3 HOH B 17 367 26 HOH HOH . E 3 HOH B 18 368 28 HOH HOH . E 3 HOH B 19 369 29 HOH HOH . E 3 HOH B 20 370 30 HOH HOH . E 3 HOH B 21 371 31 HOH HOH . E 3 HOH B 22 372 32 HOH HOH . E 3 HOH B 23 373 33 HOH HOH . E 3 HOH B 24 374 35 HOH HOH . E 3 HOH B 25 375 36 HOH HOH . E 3 HOH B 26 376 37 HOH HOH . E 3 HOH B 27 377 38 HOH HOH . E 3 HOH B 28 378 39 HOH HOH . E 3 HOH B 29 379 42 HOH HOH . E 3 HOH B 30 380 43 HOH HOH . E 3 HOH B 31 381 45 HOH HOH . E 3 HOH B 32 382 46 HOH HOH . E 3 HOH B 33 383 47 HOH HOH . E 3 HOH B 34 384 48 HOH HOH . E 3 HOH B 35 385 49 HOH HOH . E 3 HOH B 36 386 51 HOH HOH . E 3 HOH B 37 387 52 HOH HOH . E 3 HOH B 38 388 53 HOH HOH . E 3 HOH B 39 389 55 HOH HOH . E 3 HOH B 40 390 58 HOH HOH . E 3 HOH B 41 391 59 HOH HOH . E 3 HOH B 42 392 61 HOH HOH . E 3 HOH B 43 393 62 HOH HOH . E 3 HOH B 44 394 64 HOH HOH . E 3 HOH B 45 395 65 HOH HOH . E 3 HOH B 46 396 66 HOH HOH . E 3 HOH B 47 397 69 HOH HOH . E 3 HOH B 48 398 70 HOH HOH . E 3 HOH B 49 399 72 HOH HOH . E 3 HOH B 50 400 73 HOH HOH . E 3 HOH B 51 401 75 HOH HOH . E 3 HOH B 52 402 76 HOH HOH . E 3 HOH B 53 403 77 HOH HOH . E 3 HOH B 54 404 79 HOH HOH . E 3 HOH B 55 405 81 HOH HOH . E 3 HOH B 56 406 87 HOH HOH . E 3 HOH B 57 407 89 HOH HOH . E 3 HOH B 58 408 94 HOH HOH . E 3 HOH B 59 409 96 HOH HOH . E 3 HOH B 60 410 98 HOH HOH . E 3 HOH B 61 411 99 HOH HOH . E 3 HOH B 62 412 100 HOH HOH . E 3 HOH B 63 413 103 HOH HOH . E 3 HOH B 64 414 105 HOH HOH . E 3 HOH B 65 415 106 HOH HOH . E 3 HOH B 66 416 108 HOH HOH . E 3 HOH B 67 417 110 HOH HOH . E 3 HOH B 68 418 111 HOH HOH . E 3 HOH B 69 419 112 HOH HOH . E 3 HOH B 70 420 113 HOH HOH . E 3 HOH B 71 421 114 HOH HOH . E 3 HOH B 72 422 115 HOH HOH . E 3 HOH B 73 423 116 HOH HOH . E 3 HOH B 74 424 117 HOH HOH . E 3 HOH B 75 425 118 HOH HOH . E 3 HOH B 76 426 119 HOH HOH . E 3 HOH B 77 427 120 HOH HOH . E 3 HOH B 78 428 121 HOH HOH . E 3 HOH B 79 429 122 HOH HOH . E 3 HOH B 80 430 123 HOH HOH . E 3 HOH B 81 431 124 HOH HOH . E 3 HOH B 82 432 125 HOH HOH . E 3 HOH B 83 433 126 HOH HOH . E 3 HOH B 84 434 127 HOH HOH . E 3 HOH B 85 435 128 HOH HOH . E 3 HOH B 86 436 129 HOH HOH . E 3 HOH B 87 437 130 HOH HOH . E 3 HOH B 88 438 131 HOH HOH . E 3 HOH B 89 439 133 HOH HOH . E 3 HOH B 90 440 134 HOH HOH . E 3 HOH B 91 441 135 HOH HOH . E 3 HOH B 92 442 136 HOH HOH . E 3 HOH B 93 443 137 HOH HOH . E 3 HOH B 94 444 138 HOH HOH . E 3 HOH B 95 445 139 HOH HOH . E 3 HOH B 96 446 140 HOH HOH . E 3 HOH B 97 447 142 HOH HOH . E 3 HOH B 98 448 143 HOH HOH . E 3 HOH B 99 449 1 HOH HOH . E 3 HOH B 100 450 2 HOH HOH . E 3 HOH B 101 451 144 HOH HOH . E 3 HOH B 102 452 145 HOH HOH . E 3 HOH B 103 453 146 HOH HOH . E 3 HOH B 104 454 147 HOH HOH . E 3 HOH B 105 455 148 HOH HOH . E 3 HOH B 106 456 149 HOH HOH . E 3 HOH B 107 457 150 HOH HOH . E 3 HOH B 108 459 152 HOH HOH . E 3 HOH B 109 460 153 HOH HOH . E 3 HOH B 110 461 154 HOH HOH . E 3 HOH B 111 462 155 HOH HOH . E 3 HOH B 112 463 156 HOH HOH . E 3 HOH B 113 464 157 HOH HOH . E 3 HOH B 114 465 158 HOH HOH . E 3 HOH B 115 466 159 HOH HOH . E 3 HOH B 116 467 160 HOH HOH . E 3 HOH B 117 468 161 HOH HOH . E 3 HOH B 118 469 162 HOH HOH . E 3 HOH B 119 470 163 HOH HOH . E 3 HOH B 120 471 164 HOH HOH . E 3 HOH B 121 472 165 HOH HOH . E 3 HOH B 122 473 166 HOH HOH . E 3 HOH B 123 474 167 HOH HOH . E 3 HOH B 124 475 168 HOH HOH . E 3 HOH B 125 476 169 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 36.091 _atom_site.Cartn_y 4.5 _atom_site.Cartn_z 10.855 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 81.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 473 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #