data_3G97 # _model_server_result.job_id nWbT5X-S6bll9N8zw_nCDA _model_server_result.datetime_utc '2024-12-26 22:09:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3g97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":526}' # _entry.id 3G97 # _exptl.entry_id 3G97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 122.89 _cell.angle_gamma 90 _cell.entry_id 3G97 _cell.length_a 116.823 _cell.length_b 38.589 _cell.length_c 97.12 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3G97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 5 B CYS 440 1_555 E ZN ZN . B ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc2 A SG CYS 8 B CYS 443 1_555 E ZN ZN . B ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc3 A SG CYS 22 B CYS 457 1_555 E ZN ZN . B ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc4 A SG CYS 25 B CYS 460 1_555 E ZN ZN . B ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc5 A SG CYS 41 B CYS 476 1_555 F ZN ZN . B ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc6 A SG CYS 47 B CYS 482 1_555 F ZN ZN . B ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc7 A SG CYS 57 B CYS 492 1_555 F ZN ZN . B ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc8 A SG CYS 60 B CYS 495 1_555 F ZN ZN . B ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc9 B SG CYS 5 A CYS 440 1_555 G ZN ZN . A ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc10 B SG CYS 8 A CYS 443 1_555 G ZN ZN . A ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc11 B SG CYS 22 A CYS 457 1_555 G ZN ZN . A ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc12 B SG CYS 25 A CYS 460 1_555 G ZN ZN . A ZN 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc13 B SG CYS 41 A CYS 476 1_555 H ZN ZN . A ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc14 B SG CYS 47 A CYS 482 1_555 H ZN ZN . A ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc15 B SG CYS 57 A CYS 492 1_555 H ZN ZN . A ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc16 B SG CYS 60 A CYS 495 1_555 H ZN ZN . A ZN 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? hydrog WATSON-CRICK hydrog1 C N1 DG 3 C DG 3 1_555 D N3 DC 15 D DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 C N2 DG 3 C DG 3 1_555 D O2 DC 15 D DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 C O6 DG 3 C DG 3 1_555 D N4 DC 15 D DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 C N1 DA 4 C DA 4 1_555 D N3 DT 14 D DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 C N6 DA 4 C DA 4 1_555 D O4 DT 14 D DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 C N1 DA 5 C DA 5 1_555 D N3 DT 13 D DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 C N6 DA 5 C DA 5 1_555 D O4 DT 13 D DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 C N3 DC 6 C DC 6 1_555 D N1 DG 12 D DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 C N4 DC 6 C DC 6 1_555 D O6 DG 12 D DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 C O2 DC 6 C DC 6 1_555 D N2 DG 12 D DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 C N3 DC 7 C DC 7 1_555 D N1 DG 11 D DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 C N4 DC 7 C DC 7 1_555 D O6 DG 11 D DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C O2 DC 7 C DC 7 1_555 D N2 DG 11 D DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N3 DC 8 C DC 8 1_555 D N1 DG 10 D DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C N4 DC 8 C DC 8 1_555 D O6 DG 10 D DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C O2 DC 8 C DC 8 1_555 D N2 DG 10 D DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 C N1 DA 9 C DA 9 1_555 D N3 DT 9 D DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 C N6 DA 9 C DA 9 1_555 D O4 DT 9 D DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 C N1 DA 10 C DA 10 1_555 D N3 DT 8 D DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 C N6 DA 10 C DA 10 1_555 D O4 DT 8 D DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 C N3 DT 11 C DT 11 1_555 D N1 DA 7 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 C O4 DT 11 C DT 11 1_555 D N6 DA 7 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 C N1 DG 12 C DG 12 1_555 D N3 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 C N2 DG 12 C DG 12 1_555 D O2 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 C O6 DG 12 C DG 12 1_555 D N4 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DT-DA PAIR' hydrog26 C N3 DT 13 C DT 13 1_555 D N1 DA 5 D DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 C N3 DT 14 C DT 14 1_555 D N1 DA 4 D DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 C O4 DT 14 C DT 14 1_555 D N6 DA 4 D DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 C N3 DC 15 C DC 15 1_555 D N1 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 C N4 DC 15 C DC 15 1_555 D O6 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 C O2 DC 15 C DC 15 1_555 D N2 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 C N3 DT 16 C DT 16 1_555 D N1 DA 2 D DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 C O4 DT 16 C DT 16 1_555 D N6 DA 2 D DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3G97 _atom_sites.fract_transf_matrix[1][1] 0.00856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005536 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN B 1 526 518 ZN ZN . F 4 ZN B 1 527 519 ZN ZN . G 4 ZN A 1 526 517 ZN ZN . H 4 ZN A 1 527 518 ZN ZN . I 5 EDO A 1 1 1 EDO EDO . J 5 EDO A 1 528 1 EDO EDO . K 6 HOH B 1 8 8 HOH HOH . K 6 HOH B 2 13 13 HOH HOH . K 6 HOH B 3 14 14 HOH HOH . K 6 HOH B 4 15 15 HOH HOH . K 6 HOH B 5 16 16 HOH HOH . K 6 HOH B 6 17 17 HOH HOH . K 6 HOH B 7 23 23 HOH HOH . K 6 HOH B 8 25 25 HOH HOH . K 6 HOH B 9 26 26 HOH HOH . K 6 HOH B 10 27 27 HOH HOH . K 6 HOH B 11 28 28 HOH HOH . K 6 HOH B 12 29 29 HOH HOH . K 6 HOH B 13 31 31 HOH HOH . K 6 HOH B 14 34 34 HOH HOH . K 6 HOH B 15 36 36 HOH HOH . K 6 HOH B 16 40 40 HOH HOH . K 6 HOH B 17 46 46 HOH HOH . L 6 HOH A 1 2 2 HOH HOH . L 6 HOH A 2 3 3 HOH HOH . L 6 HOH A 3 4 4 HOH HOH . L 6 HOH A 4 5 5 HOH HOH . L 6 HOH A 5 6 6 HOH HOH . L 6 HOH A 6 7 7 HOH HOH . L 6 HOH A 7 9 9 HOH HOH . L 6 HOH A 8 11 11 HOH HOH . L 6 HOH A 9 12 12 HOH HOH . L 6 HOH A 10 19 19 HOH HOH . L 6 HOH A 11 20 20 HOH HOH . L 6 HOH A 12 22 22 HOH HOH . L 6 HOH A 13 32 32 HOH HOH . L 6 HOH A 14 33 33 HOH HOH . L 6 HOH A 15 37 37 HOH HOH . L 6 HOH A 16 38 38 HOH HOH . L 6 HOH A 17 39 39 HOH HOH . L 6 HOH A 18 41 41 HOH HOH . L 6 HOH A 19 42 42 HOH HOH . L 6 HOH A 20 43 43 HOH HOH . L 6 HOH A 21 44 44 HOH HOH . L 6 HOH A 22 45 45 HOH HOH . L 6 HOH A 23 529 1 HOH HOH . M 6 HOH C 1 21 21 HOH HOH . M 6 HOH C 2 35 35 HOH HOH . N 6 HOH D 1 17 10 HOH HOH . N 6 HOH D 2 18 18 HOH HOH . N 6 HOH D 3 24 24 HOH HOH . N 6 HOH D 4 30 30 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -4.66 _atom_site.Cartn_y 15.473 _atom_site.Cartn_z 17.834 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 97.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 526 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #