data_3GA4 # _model_server_result.job_id A7RNACpXyVaN7RV-laIPUQ _model_server_result.datetime_utc '2025-03-04 14:37:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ga4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":178}' # _entry.id 3GA4 # _exptl.entry_id 3GA4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GA4 _cell.length_a 58.989 _cell.length_b 61.076 _cell.length_c 106.985 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GA4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 56 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 55 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 59 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 58 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.059 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 246 n n O1 HO1 PG4 sing 247 n n C1 C2 PG4 sing 248 n n C1 H11 PG4 sing 249 n n C1 H12 PG4 sing 250 n n C2 O2 PG4 sing 251 n n C2 H21 PG4 sing 252 n n C2 H22 PG4 sing 253 n n O2 C3 PG4 sing 254 n n C3 C4 PG4 sing 255 n n C3 H31 PG4 sing 256 n n C3 H32 PG4 sing 257 n n C4 O3 PG4 sing 258 n n C4 H41 PG4 sing 259 n n C4 H42 PG4 sing 260 n n O3 C5 PG4 sing 261 n n C5 C6 PG4 sing 262 n n C5 H51 PG4 sing 263 n n C5 H52 PG4 sing 264 n n C6 O4 PG4 sing 265 n n C6 H61 PG4 sing 266 n n C6 H62 PG4 sing 267 n n O4 C7 PG4 sing 268 n n C7 C8 PG4 sing 269 n n C7 H71 PG4 sing 270 n n C7 H72 PG4 sing 271 n n C8 O5 PG4 sing 272 n n C8 H81 PG4 sing 273 n n C8 H82 PG4 sing 274 n n O5 HO5 PG4 sing 275 n n # _atom_sites.entry_id 3GA4 _atom_sites.fract_transf_matrix[1][1] 0.016952 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009347 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG4 A 1 178 1 PG4 PG4 . C 3 EDO A 1 179 1 EDO EDO . D 3 EDO A 1 180 2 EDO EDO . E 3 EDO A 1 181 3 EDO EDO . F 3 EDO A 1 182 4 EDO EDO . G 4 HOH A 1 183 183 HOH HOH . G 4 HOH A 2 184 184 HOH HOH . G 4 HOH A 3 185 185 HOH HOH . G 4 HOH A 4 186 186 HOH HOH . G 4 HOH A 5 187 187 HOH HOH . G 4 HOH A 6 188 188 HOH HOH . G 4 HOH A 7 189 2 HOH HOH . G 4 HOH A 8 190 3 HOH HOH . G 4 HOH A 9 191 191 HOH HOH . G 4 HOH A 10 192 192 HOH HOH . G 4 HOH A 11 193 4 HOH HOH . G 4 HOH A 12 194 6 HOH HOH . G 4 HOH A 13 195 195 HOH HOH . G 4 HOH A 14 196 196 HOH HOH . G 4 HOH A 15 197 7 HOH HOH . G 4 HOH A 16 198 8 HOH HOH . G 4 HOH A 17 199 199 HOH HOH . G 4 HOH A 18 200 200 HOH HOH . G 4 HOH A 19 201 9 HOH HOH . G 4 HOH A 20 202 202 HOH HOH . G 4 HOH A 21 203 10 HOH HOH . G 4 HOH A 22 204 11 HOH HOH . G 4 HOH A 23 205 205 HOH HOH . G 4 HOH A 24 206 206 HOH HOH . G 4 HOH A 25 207 12 HOH HOH . G 4 HOH A 26 208 13 HOH HOH . G 4 HOH A 27 209 209 HOH HOH . G 4 HOH A 28 210 14 HOH HOH . G 4 HOH A 29 211 15 HOH HOH . G 4 HOH A 30 212 16 HOH HOH . G 4 HOH A 31 213 17 HOH HOH . G 4 HOH A 32 214 18 HOH HOH . G 4 HOH A 33 215 19 HOH HOH . G 4 HOH A 34 216 20 HOH HOH . G 4 HOH A 35 217 21 HOH HOH . G 4 HOH A 36 218 218 HOH HOH . G 4 HOH A 37 219 219 HOH HOH . G 4 HOH A 38 220 22 HOH HOH . G 4 HOH A 39 221 23 HOH HOH . G 4 HOH A 40 222 24 HOH HOH . G 4 HOH A 41 223 25 HOH HOH . G 4 HOH A 42 224 26 HOH HOH . G 4 HOH A 43 225 225 HOH HOH . G 4 HOH A 44 226 27 HOH HOH . G 4 HOH A 45 227 28 HOH HOH . G 4 HOH A 46 228 30 HOH HOH . G 4 HOH A 47 229 31 HOH HOH . G 4 HOH A 48 230 32 HOH HOH . G 4 HOH A 49 231 33 HOH HOH . G 4 HOH A 50 232 34 HOH HOH . G 4 HOH A 51 233 35 HOH HOH . G 4 HOH A 52 234 36 HOH HOH . G 4 HOH A 53 235 37 HOH HOH . G 4 HOH A 54 236 38 HOH HOH . G 4 HOH A 55 237 39 HOH HOH . G 4 HOH A 56 238 40 HOH HOH . G 4 HOH A 57 239 41 HOH HOH . G 4 HOH A 58 240 42 HOH HOH . G 4 HOH A 59 241 43 HOH HOH . G 4 HOH A 60 242 44 HOH HOH . G 4 HOH A 61 243 45 HOH HOH . G 4 HOH A 62 244 46 HOH HOH . G 4 HOH A 63 245 47 HOH HOH . G 4 HOH A 64 246 246 HOH HOH . G 4 HOH A 65 247 48 HOH HOH . G 4 HOH A 66 248 248 HOH HOH . G 4 HOH A 67 249 49 HOH HOH . G 4 HOH A 68 250 250 HOH HOH . G 4 HOH A 69 251 251 HOH HOH . G 4 HOH A 70 252 50 HOH HOH . G 4 HOH A 71 253 253 HOH HOH . G 4 HOH A 72 254 51 HOH HOH . G 4 HOH A 73 255 255 HOH HOH . G 4 HOH A 74 256 256 HOH HOH . G 4 HOH A 75 257 257 HOH HOH . G 4 HOH A 76 258 53 HOH HOH . G 4 HOH A 77 259 259 HOH HOH . G 4 HOH A 78 260 54 HOH HOH . G 4 HOH A 79 261 55 HOH HOH . G 4 HOH A 80 262 56 HOH HOH . G 4 HOH A 81 263 263 HOH HOH . G 4 HOH A 82 264 264 HOH HOH . G 4 HOH A 83 265 57 HOH HOH . G 4 HOH A 84 266 58 HOH HOH . G 4 HOH A 85 267 60 HOH HOH . G 4 HOH A 86 268 61 HOH HOH . G 4 HOH A 87 269 62 HOH HOH . G 4 HOH A 88 270 63 HOH HOH . G 4 HOH A 89 271 271 HOH HOH . G 4 HOH A 90 272 64 HOH HOH . G 4 HOH A 91 273 273 HOH HOH . G 4 HOH A 92 274 65 HOH HOH . G 4 HOH A 93 275 275 HOH HOH . G 4 HOH A 94 276 66 HOH HOH . G 4 HOH A 95 277 277 HOH HOH . G 4 HOH A 96 278 278 HOH HOH . G 4 HOH A 97 279 67 HOH HOH . G 4 HOH A 98 280 68 HOH HOH . G 4 HOH A 99 281 69 HOH HOH . G 4 HOH A 100 282 70 HOH HOH . G 4 HOH A 101 283 71 HOH HOH . G 4 HOH A 102 284 72 HOH HOH . G 4 HOH A 103 285 73 HOH HOH . G 4 HOH A 104 286 74 HOH HOH . G 4 HOH A 105 287 75 HOH HOH . G 4 HOH A 106 288 288 HOH HOH . G 4 HOH A 107 289 76 HOH HOH . G 4 HOH A 108 290 78 HOH HOH . G 4 HOH A 109 291 291 HOH HOH . G 4 HOH A 110 292 79 HOH HOH . G 4 HOH A 111 293 80 HOH HOH . G 4 HOH A 112 294 81 HOH HOH . G 4 HOH A 113 295 82 HOH HOH . G 4 HOH A 114 296 296 HOH HOH . G 4 HOH A 115 297 83 HOH HOH . G 4 HOH A 116 298 84 HOH HOH . G 4 HOH A 117 299 299 HOH HOH . G 4 HOH A 118 300 85 HOH HOH . G 4 HOH A 119 301 301 HOH HOH . G 4 HOH A 120 302 87 HOH HOH . G 4 HOH A 121 303 88 HOH HOH . G 4 HOH A 122 304 89 HOH HOH . G 4 HOH A 123 305 90 HOH HOH . G 4 HOH A 124 306 91 HOH HOH . G 4 HOH A 125 307 92 HOH HOH . G 4 HOH A 126 308 308 HOH HOH . G 4 HOH A 127 309 93 HOH HOH . G 4 HOH A 128 310 94 HOH HOH . G 4 HOH A 129 311 95 HOH HOH . G 4 HOH A 130 312 97 HOH HOH . G 4 HOH A 131 313 98 HOH HOH . G 4 HOH A 132 314 100 HOH HOH . G 4 HOH A 133 315 101 HOH HOH . G 4 HOH A 134 316 102 HOH HOH . G 4 HOH A 135 317 103 HOH HOH . G 4 HOH A 136 318 104 HOH HOH . G 4 HOH A 137 319 105 HOH HOH . G 4 HOH A 138 320 107 HOH HOH . G 4 HOH A 139 321 108 HOH HOH . G 4 HOH A 140 322 109 HOH HOH . G 4 HOH A 141 323 110 HOH HOH . G 4 HOH A 142 324 324 HOH HOH . G 4 HOH A 143 325 111 HOH HOH . G 4 HOH A 144 326 113 HOH HOH . G 4 HOH A 145 327 114 HOH HOH . G 4 HOH A 146 328 115 HOH HOH . G 4 HOH A 147 329 116 HOH HOH . G 4 HOH A 148 330 117 HOH HOH . G 4 HOH A 149 331 118 HOH HOH . G 4 HOH A 150 332 119 HOH HOH . G 4 HOH A 151 333 121 HOH HOH . G 4 HOH A 152 334 124 HOH HOH . G 4 HOH A 153 335 125 HOH HOH . G 4 HOH A 154 336 126 HOH HOH . G 4 HOH A 155 337 127 HOH HOH . G 4 HOH A 156 338 338 HOH HOH . G 4 HOH A 157 339 130 HOH HOH . G 4 HOH A 158 340 340 HOH HOH . G 4 HOH A 159 341 131 HOH HOH . G 4 HOH A 160 342 132 HOH HOH . G 4 HOH A 161 343 134 HOH HOH . G 4 HOH A 162 344 344 HOH HOH . G 4 HOH A 163 345 136 HOH HOH . G 4 HOH A 164 346 137 HOH HOH . G 4 HOH A 165 347 138 HOH HOH . G 4 HOH A 166 348 140 HOH HOH . G 4 HOH A 167 349 141 HOH HOH . G 4 HOH A 168 350 142 HOH HOH . G 4 HOH A 169 351 144 HOH HOH . G 4 HOH A 170 352 352 HOH HOH . G 4 HOH A 171 353 145 HOH HOH . G 4 HOH A 172 354 146 HOH HOH . G 4 HOH A 173 355 355 HOH HOH . G 4 HOH A 174 356 147 HOH HOH . G 4 HOH A 175 357 148 HOH HOH . G 4 HOH A 176 358 358 HOH HOH . G 4 HOH A 177 359 150 HOH HOH . G 4 HOH A 178 360 152 HOH HOH . G 4 HOH A 179 361 153 HOH HOH . G 4 HOH A 180 362 154 HOH HOH . G 4 HOH A 181 363 155 HOH HOH . G 4 HOH A 182 364 157 HOH HOH . G 4 HOH A 183 365 159 HOH HOH . G 4 HOH A 184 366 161 HOH HOH . G 4 HOH A 185 367 163 HOH HOH . G 4 HOH A 186 368 165 HOH HOH . G 4 HOH A 187 369 369 HOH HOH . G 4 HOH A 188 370 166 HOH HOH . G 4 HOH A 189 371 168 HOH HOH . G 4 HOH A 190 372 172 HOH HOH . G 4 HOH A 191 373 175 HOH HOH . G 4 HOH A 192 374 177 HOH HOH . G 4 HOH A 193 375 178 HOH HOH . G 4 HOH A 194 376 180 HOH HOH . G 4 HOH A 195 377 181 HOH HOH . G 4 HOH A 196 378 182 HOH HOH . G 4 HOH A 197 381 381 HOH HOH . G 4 HOH A 198 412 412 HOH HOH . G 4 HOH A 199 414 414 HOH HOH . G 4 HOH A 200 429 429 HOH HOH . G 4 HOH A 201 430 430 HOH HOH . G 4 HOH A 202 431 431 HOH HOH . G 4 HOH A 203 432 432 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . A . B 2 25.714 -1.439 26.586 0.5 35.64 ? O1 PG4 178 A 1 HETATM 2 O O1 PG4 . B . B 2 23.103 -1.252 28.46 0.5 35.65 ? O1 PG4 178 A 1 HETATM 3 C C1 PG4 . A . B 2 26.911 -0.786 27.03 0.5 35.72 ? C1 PG4 178 A 1 HETATM 4 C C1 PG4 . B . B 2 22.459 -1.903 27.369 0.5 35.73 ? C1 PG4 178 A 1 HETATM 5 C C2 PG4 . A . B 2 26.804 0.72 26.822 0.5 36.23 ? C2 PG4 178 A 1 HETATM 6 C C2 PG4 . B . B 2 21.525 -0.925 26.688 0.5 36.22 ? C2 PG4 178 A 1 HETATM 7 O O2 PG4 . A . B 2 25.572 0.812 26.171 0.5 39.36 ? O2 PG4 178 A 1 HETATM 8 O O2 PG4 . B . B 2 21.414 0.413 27.115 0.5 39.39 ? O2 PG4 178 A 1 HETATM 9 C C3 PG4 . A . B 2 25.204 1.937 25.928 0.5 40.04 ? C3 PG4 178 A 1 HETATM 10 C C3 PG4 . B . B 2 22.596 1.184 27.312 0.5 40.06 ? C3 PG4 178 A 1 HETATM 11 C C4 PG4 . A . B 2 24.258 1.579 24.968 0.5 41.2 ? C4 PG4 178 A 1 HETATM 12 C C4 PG4 . B . B 2 22.89 2.215 26.295 0.5 41.2 ? C4 PG4 178 A 1 HETATM 13 O O3 PG4 . A . B 2 23.069 2.117 25.333 0.5 42.84 ? O3 PG4 178 A 1 HETATM 14 O O3 PG4 . B . B 2 23.554 1.873 25.119 0.5 42.85 ? O3 PG4 178 A 1 HETATM 15 C C5 PG4 . A . B 2 22.787 2.787 24.197 0.5 42.6 ? C5 PG4 178 A 1 HETATM 16 C C5 PG4 . B . B 2 22.961 2.696 24.197 0.5 42.6 ? C5 PG4 178 A 1 HETATM 17 C C6 PG4 . A . B 2 21.548 2.263 23.537 0.5 41.6 ? C6 PG4 178 A 1 HETATM 18 C C6 PG4 . B . B 2 21.629 2.252 23.637 0.5 41.6 ? C6 PG4 178 A 1 HETATM 19 O O4 PG4 . A . B 2 21.706 1.026 22.926 0.5 42.63 ? O4 PG4 178 A 1 HETATM 20 O O4 PG4 . B . B 2 21.669 1.056 22.924 0.5 42.63 ? O4 PG4 178 A 1 HETATM 21 C C7 PG4 . A . B 2 20.99 -0.068 23.491 0.5 40.19 ? C7 PG4 178 A 1 HETATM 22 C C7 PG4 . B . B 2 21.009 -0.067 23.505 0.5 40.19 ? C7 PG4 178 A 1 HETATM 23 C C8 PG4 . A . B 2 20.54 -1.072 22.435 0.5 36.21 ? C8 PG4 178 A 1 HETATM 24 C C8 PG4 . B . B 2 20.542 -1.062 22.447 0.5 36.21 ? C8 PG4 178 A 1 HETATM 25 O O5 PG4 . A . B 2 20.799 -2.419 22.859 0.5 33.91 ? O5 PG4 178 A 1 HETATM 26 O O5 PG4 . B . B 2 20.799 -2.413 22.859 0.5 33.91 ? O5 PG4 178 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 584 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #