data_3GB9 # _model_server_result.job_id JVcS0_eu27B7PoyuXaLhfA _model_server_result.datetime_utc '2024-11-05 16:44:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gb9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":290}' # _entry.id 3GB9 # _exptl.entry_id 3GB9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 33 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GB9 _cell.length_a 71.791 _cell.length_b 130.648 _cell.length_c 149.177 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 319 n n S O2 SO4 doub 320 n n S O3 SO4 sing 321 n n S O4 SO4 sing 322 n n # _atom_sites.entry_id 3GB9 _atom_sites.fract_transf_matrix[1][1] 0.013929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007654 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006703 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 A2F A 1 300 300 A2F A2F . E 3 SO4 A 1 290 3 SO4 SO4 . F 3 SO4 A 1 291 4 SO4 SO4 . G 3 SO4 A 1 292 10 SO4 SO4 . H 3 SO4 A 1 293 12 SO4 SO4 . I 3 SO4 A 1 294 13 SO4 SO4 . J 3 SO4 A 1 295 16 SO4 SO4 . K 3 SO4 A 1 296 20 SO4 SO4 . L 3 SO4 A 1 297 23 SO4 SO4 . M 3 SO4 A 1 298 25 SO4 SO4 . N 3 SO4 A 1 299 29 SO4 SO4 . O 3 SO4 A 1 301 30 SO4 SO4 . P 3 SO4 A 1 302 31 SO4 SO4 . Q 2 A2F B 1 300 300 A2F A2F . R 3 SO4 B 1 290 2 SO4 SO4 . S 3 SO4 B 1 291 5 SO4 SO4 . T 3 SO4 B 1 292 6 SO4 SO4 . U 3 SO4 B 1 293 7 SO4 SO4 . V 3 SO4 B 1 294 9 SO4 SO4 . W 3 SO4 B 1 295 14 SO4 SO4 . X 3 SO4 B 1 296 19 SO4 SO4 . Y 3 SO4 B 1 297 21 SO4 SO4 . Z 3 SO4 B 1 298 24 SO4 SO4 . AA 3 SO4 B 1 299 26 SO4 SO4 . BA 3 SO4 B 1 301 27 SO4 SO4 . CA 3 SO4 B 1 302 28 SO4 SO4 . DA 2 A2F C 1 300 300 A2F A2F . EA 3 SO4 C 1 290 1 SO4 SO4 . FA 3 SO4 C 1 291 8 SO4 SO4 . GA 3 SO4 C 1 292 11 SO4 SO4 . HA 3 SO4 C 1 293 15 SO4 SO4 . IA 3 SO4 C 1 294 17 SO4 SO4 . JA 3 SO4 C 1 295 18 SO4 SO4 . KA 3 SO4 C 1 296 22 SO4 SO4 . LA 3 SO4 C 1 297 32 SO4 SO4 . MA 3 SO4 C 1 298 33 SO4 SO4 . NA 4 GOL C 1 299 34 GOL GOL . OA 5 HOH A 1 306 38 HOH HOH . OA 5 HOH A 2 314 46 HOH HOH . OA 5 HOH A 3 317 49 HOH HOH . OA 5 HOH A 4 318 50 HOH HOH . OA 5 HOH A 5 323 55 HOH HOH . OA 5 HOH A 6 325 57 HOH HOH . OA 5 HOH A 7 327 59 HOH HOH . OA 5 HOH A 8 329 61 HOH HOH . OA 5 HOH A 9 330 62 HOH HOH . OA 5 HOH A 10 335 67 HOH HOH . OA 5 HOH A 11 340 72 HOH HOH . OA 5 HOH A 12 341 73 HOH HOH . OA 5 HOH A 13 343 75 HOH HOH . OA 5 HOH A 14 345 77 HOH HOH . OA 5 HOH A 15 346 78 HOH HOH . OA 5 HOH A 16 349 81 HOH HOH . OA 5 HOH A 17 351 83 HOH HOH . OA 5 HOH A 18 353 85 HOH HOH . OA 5 HOH A 19 356 88 HOH HOH . OA 5 HOH A 20 357 89 HOH HOH . OA 5 HOH A 21 359 92 HOH HOH . OA 5 HOH A 22 366 101 HOH HOH . OA 5 HOH A 23 367 102 HOH HOH . OA 5 HOH A 24 370 105 HOH HOH . OA 5 HOH A 25 372 107 HOH HOH . OA 5 HOH A 26 376 112 HOH HOH . OA 5 HOH A 27 378 114 HOH HOH . OA 5 HOH A 28 380 116 HOH HOH . OA 5 HOH A 29 383 119 HOH HOH . OA 5 HOH A 30 385 121 HOH HOH . OA 5 HOH A 31 388 124 HOH HOH . OA 5 HOH A 32 389 125 HOH HOH . OA 5 HOH A 33 390 126 HOH HOH . OA 5 HOH A 34 393 129 HOH HOH . OA 5 HOH A 35 394 130 HOH HOH . OA 5 HOH A 36 396 132 HOH HOH . OA 5 HOH A 37 398 135 HOH HOH . OA 5 HOH A 38 402 139 HOH HOH . OA 5 HOH A 39 403 140 HOH HOH . OA 5 HOH A 40 410 147 HOH HOH . OA 5 HOH A 41 412 149 HOH HOH . OA 5 HOH A 42 413 150 HOH HOH . OA 5 HOH A 43 415 152 HOH HOH . OA 5 HOH A 44 416 153 HOH HOH . OA 5 HOH A 45 423 160 HOH HOH . OA 5 HOH A 46 424 161 HOH HOH . OA 5 HOH A 47 427 164 HOH HOH . OA 5 HOH A 48 430 168 HOH HOH . OA 5 HOH A 49 431 169 HOH HOH . OA 5 HOH A 50 438 176 HOH HOH . OA 5 HOH A 51 439 177 HOH HOH . OA 5 HOH A 52 442 180 HOH HOH . OA 5 HOH A 53 443 181 HOH HOH . OA 5 HOH A 54 448 186 HOH HOH . OA 5 HOH A 55 450 188 HOH HOH . OA 5 HOH A 56 451 189 HOH HOH . OA 5 HOH A 57 462 201 HOH HOH . OA 5 HOH A 58 465 205 HOH HOH . OA 5 HOH A 59 467 207 HOH HOH . OA 5 HOH A 60 468 208 HOH HOH . OA 5 HOH A 61 469 209 HOH HOH . OA 5 HOH A 62 472 212 HOH HOH . OA 5 HOH A 63 475 215 HOH HOH . OA 5 HOH A 64 476 216 HOH HOH . OA 5 HOH A 65 477 217 HOH HOH . OA 5 HOH A 66 478 218 HOH HOH . OA 5 HOH A 67 480 220 HOH HOH . OA 5 HOH A 68 481 221 HOH HOH . OA 5 HOH A 69 482 222 HOH HOH . OA 5 HOH A 70 484 224 HOH HOH . OA 5 HOH A 71 486 226 HOH HOH . OA 5 HOH A 72 494 236 HOH HOH . OA 5 HOH A 73 496 238 HOH HOH . OA 5 HOH A 74 500 242 HOH HOH . OA 5 HOH A 75 505 247 HOH HOH . OA 5 HOH A 76 507 249 HOH HOH . OA 5 HOH A 77 509 251 HOH HOH . OA 5 HOH A 78 510 252 HOH HOH . OA 5 HOH A 79 511 253 HOH HOH . OA 5 HOH A 80 513 255 HOH HOH . PA 5 HOH B 1 303 35 HOH HOH . PA 5 HOH B 2 305 37 HOH HOH . PA 5 HOH B 3 308 40 HOH HOH . PA 5 HOH B 4 309 41 HOH HOH . PA 5 HOH B 5 310 42 HOH HOH . PA 5 HOH B 6 312 44 HOH HOH . PA 5 HOH B 7 313 45 HOH HOH . PA 5 HOH B 8 319 51 HOH HOH . PA 5 HOH B 9 324 56 HOH HOH . PA 5 HOH B 10 326 58 HOH HOH . PA 5 HOH B 11 333 65 HOH HOH . PA 5 HOH B 12 337 69 HOH HOH . PA 5 HOH B 13 338 70 HOH HOH . PA 5 HOH B 14 352 84 HOH HOH . PA 5 HOH B 15 364 99 HOH HOH . PA 5 HOH B 16 375 111 HOH HOH . PA 5 HOH B 17 377 113 HOH HOH . PA 5 HOH B 18 384 120 HOH HOH . PA 5 HOH B 19 386 122 HOH HOH . PA 5 HOH B 20 387 123 HOH HOH . PA 5 HOH B 21 392 128 HOH HOH . PA 5 HOH B 22 397 133 HOH HOH . PA 5 HOH B 23 400 137 HOH HOH . PA 5 HOH B 24 401 138 HOH HOH . PA 5 HOH B 25 406 143 HOH HOH . PA 5 HOH B 26 407 144 HOH HOH . PA 5 HOH B 27 408 145 HOH HOH . PA 5 HOH B 28 414 151 HOH HOH . PA 5 HOH B 29 417 154 HOH HOH . PA 5 HOH B 30 419 156 HOH HOH . PA 5 HOH B 31 422 159 HOH HOH . PA 5 HOH B 32 425 162 HOH HOH . PA 5 HOH B 33 426 163 HOH HOH . PA 5 HOH B 34 429 167 HOH HOH . PA 5 HOH B 35 432 170 HOH HOH . PA 5 HOH B 36 434 172 HOH HOH . PA 5 HOH B 37 435 173 HOH HOH . PA 5 HOH B 38 437 175 HOH HOH . PA 5 HOH B 39 447 185 HOH HOH . PA 5 HOH B 40 452 190 HOH HOH . PA 5 HOH B 41 453 191 HOH HOH . PA 5 HOH B 42 454 192 HOH HOH . PA 5 HOH B 43 455 193 HOH HOH . PA 5 HOH B 44 457 195 HOH HOH . PA 5 HOH B 45 460 198 HOH HOH . PA 5 HOH B 46 463 202 HOH HOH . PA 5 HOH B 47 466 206 HOH HOH . PA 5 HOH B 48 470 210 HOH HOH . PA 5 HOH B 49 474 214 HOH HOH . PA 5 HOH B 50 479 219 HOH HOH . PA 5 HOH B 51 485 225 HOH HOH . PA 5 HOH B 52 487 227 HOH HOH . PA 5 HOH B 53 488 228 HOH HOH . PA 5 HOH B 54 490 231 HOH HOH . PA 5 HOH B 55 492 233 HOH HOH . PA 5 HOH B 56 493 235 HOH HOH . PA 5 HOH B 57 495 237 HOH HOH . PA 5 HOH B 58 499 241 HOH HOH . PA 5 HOH B 59 501 243 HOH HOH . PA 5 HOH B 60 502 244 HOH HOH . PA 5 HOH B 61 512 254 HOH HOH . QA 5 HOH C 1 304 36 HOH HOH . QA 5 HOH C 2 307 39 HOH HOH . QA 5 HOH C 3 311 43 HOH HOH . QA 5 HOH C 4 315 47 HOH HOH . QA 5 HOH C 5 316 48 HOH HOH . QA 5 HOH C 6 320 52 HOH HOH . QA 5 HOH C 7 321 53 HOH HOH . QA 5 HOH C 8 322 54 HOH HOH . QA 5 HOH C 9 328 60 HOH HOH . QA 5 HOH C 10 331 63 HOH HOH . QA 5 HOH C 11 332 64 HOH HOH . QA 5 HOH C 12 334 66 HOH HOH . QA 5 HOH C 13 336 68 HOH HOH . QA 5 HOH C 14 339 71 HOH HOH . QA 5 HOH C 15 342 74 HOH HOH . QA 5 HOH C 16 344 76 HOH HOH . QA 5 HOH C 17 347 79 HOH HOH . QA 5 HOH C 18 348 80 HOH HOH . QA 5 HOH C 19 350 82 HOH HOH . QA 5 HOH C 20 354 86 HOH HOH . QA 5 HOH C 21 355 87 HOH HOH . QA 5 HOH C 22 358 91 HOH HOH . QA 5 HOH C 23 360 93 HOH HOH . QA 5 HOH C 24 361 94 HOH HOH . QA 5 HOH C 25 362 95 HOH HOH . QA 5 HOH C 26 363 96 HOH HOH . QA 5 HOH C 27 365 100 HOH HOH . QA 5 HOH C 28 368 103 HOH HOH . QA 5 HOH C 29 369 104 HOH HOH . QA 5 HOH C 30 371 106 HOH HOH . QA 5 HOH C 31 373 108 HOH HOH . QA 5 HOH C 32 374 109 HOH HOH . QA 5 HOH C 33 379 115 HOH HOH . QA 5 HOH C 34 381 117 HOH HOH . QA 5 HOH C 35 382 118 HOH HOH . QA 5 HOH C 36 391 127 HOH HOH . QA 5 HOH C 37 395 131 HOH HOH . QA 5 HOH C 38 399 136 HOH HOH . QA 5 HOH C 39 404 141 HOH HOH . QA 5 HOH C 40 405 142 HOH HOH . QA 5 HOH C 41 409 146 HOH HOH . QA 5 HOH C 42 411 148 HOH HOH . QA 5 HOH C 43 418 155 HOH HOH . QA 5 HOH C 44 420 157 HOH HOH . QA 5 HOH C 45 421 158 HOH HOH . QA 5 HOH C 46 428 165 HOH HOH . QA 5 HOH C 47 433 171 HOH HOH . QA 5 HOH C 48 436 174 HOH HOH . QA 5 HOH C 49 440 178 HOH HOH . QA 5 HOH C 50 441 179 HOH HOH . QA 5 HOH C 51 444 182 HOH HOH . QA 5 HOH C 52 445 183 HOH HOH . QA 5 HOH C 53 446 184 HOH HOH . QA 5 HOH C 54 449 187 HOH HOH . QA 5 HOH C 55 456 194 HOH HOH . QA 5 HOH C 56 458 196 HOH HOH . QA 5 HOH C 57 459 197 HOH HOH . QA 5 HOH C 58 461 199 HOH HOH . QA 5 HOH C 59 464 203 HOH HOH . QA 5 HOH C 60 471 211 HOH HOH . QA 5 HOH C 61 473 213 HOH HOH . QA 5 HOH C 62 483 223 HOH HOH . QA 5 HOH C 63 489 229 HOH HOH . QA 5 HOH C 64 491 232 HOH HOH . QA 5 HOH C 65 497 239 HOH HOH . QA 5 HOH C 66 498 240 HOH HOH . QA 5 HOH C 67 503 245 HOH HOH . QA 5 HOH C 68 504 246 HOH HOH . QA 5 HOH C 69 506 248 HOH HOH . QA 5 HOH C 70 508 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . R 3 -10.02 35.943 -44.841 1 36.13 ? S SO4 290 B 1 HETATM 2 O O1 SO4 . . . R 3 -9.777 35.533 -46.203 1 41.05 ? O1 SO4 290 B 1 HETATM 3 O O2 SO4 . . . R 3 -10.831 37.146 -44.806 1 34.19 ? O2 SO4 290 B 1 HETATM 4 O O3 SO4 . . . R 3 -10.785 34.93 -44.14 1 36.55 ? O3 SO4 290 B 1 HETATM 5 O O4 SO4 . . . R 3 -8.684 36.158 -44.268 1 36.11 ? O4 SO4 290 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #