data_3GBK # _model_server_result.job_id dsaLqTY8sokg3n7IgcpRmg _model_server_result.datetime_utc '2024-11-04 23:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gbk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1385}' # _entry.id 3GBK # _exptl.entry_id 3GBK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 591.736 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(1-{3-[4-(biphenyl-4-ylcarbonyl)-2-propylphenoxy]propyl}-1,2,3,4-tetrahydroquinolin-5-yl)oxy]-2-methylpropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.06 _cell.angle_gamma 90 _cell.entry_id 3GBK _cell.length_a 56.502 _cell.length_b 88.892 _cell.length_c 58.371 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GBK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C38 H41 N O5' _chem_comp.formula_weight 591.736 _chem_comp.id 2PQ _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(1-{3-[4-(biphenyl-4-ylcarbonyl)-2-propylphenoxy]propyl}-1,2,3,4-tetrahydroquinolin-5-yl)oxy]-2-methylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAB 2PQ doub 1 n y CAB CAC 2PQ sing 2 n y CAB HAB 2PQ sing 3 n n CAC CAD 2PQ doub 4 n y CAC HAC 2PQ sing 5 n n CAE CAD 2PQ sing 6 n y CAD HAD 2PQ sing 7 n n CAF CAE 2PQ doub 8 n y CAE HAE 2PQ sing 9 n n CAA CAF 2PQ sing 10 n y CAF HAF 2PQ sing 11 n n CAJ CAA 2PQ sing 12 n y CAK CAJ 2PQ doub 13 n y CAI CAJ 2PQ sing 14 n y CAL CAK 2PQ sing 15 n y CAK HAK 2PQ sing 16 n n CAG CAL 2PQ doub 17 n y CAL HAL 2PQ sing 18 n n CAH CAI 2PQ doub 19 n y CAI HAI 2PQ sing 20 n n CAG CAH 2PQ sing 21 n y CAH HAH 2PQ sing 22 n n CBP CAG 2PQ sing 23 n n CAP CBP 2PQ sing 24 n n OBQ CBP 2PQ doub 25 n n CAO CAP 2PQ doub 26 n y CAP CAQ 2PQ sing 27 n y CAN CAO 2PQ sing 28 n y CAO HAO 2PQ sing 29 n n CBM CAN 2PQ sing 30 n n CAN CAM 2PQ doub 31 n y CBN CBM 2PQ sing 32 n n CBM HBM 2PQ sing 33 n n CBM HBMA 2PQ sing 34 n n CBO CBN 2PQ sing 35 n n CBN HBN 2PQ sing 36 n n CBN HBNA 2PQ sing 37 n n CBO HBO 2PQ sing 38 n n CBO HBOA 2PQ sing 39 n n CBO HBOB 2PQ sing 40 n n CAR CAQ 2PQ doub 41 n y CAQ HAQ 2PQ sing 42 n n CAM CAR 2PQ sing 43 n y CAR HAR 2PQ sing 44 n n OBL CAM 2PQ sing 45 n n OBL CBK 2PQ sing 46 n n CBJ CBK 2PQ sing 47 n n CBK HBK 2PQ sing 48 n n CBK HBKA 2PQ sing 49 n n CBI CBJ 2PQ sing 50 n n CBJ HBJ 2PQ sing 51 n n CBJ HBJA 2PQ sing 52 n n NAX CBI 2PQ sing 53 n n CBI HBI 2PQ sing 54 n n CBI HBIA 2PQ sing 55 n n CAW NAX 2PQ sing 56 n n NAX CAY 2PQ sing 57 n n CAY CAZ 2PQ sing 58 n n CAY HAY 2PQ sing 59 n n CAY HAYA 2PQ sing 60 n n CBA CAZ 2PQ sing 61 n n CAZ HAZ 2PQ sing 62 n n CAZ HAZA 2PQ sing 63 n n CAV CBA 2PQ sing 64 n n CBA HBA 2PQ sing 65 n n CBA HBAA 2PQ sing 66 n n CAU CAV 2PQ doub 67 n y CAV CAW 2PQ sing 68 n y CBH CAW 2PQ doub 69 n y CAT CBH 2PQ sing 70 n y CBH HBH 2PQ sing 71 n n CAS CAT 2PQ doub 72 n y CAT HAT 2PQ sing 73 n n CAS CAU 2PQ sing 74 n y CAS HAS 2PQ sing 75 n n CAU OBE 2PQ sing 76 n n CBD OBE 2PQ sing 77 n n CBB CBD 2PQ sing 78 n n CBD CBF 2PQ sing 79 n n CBD CBG 2PQ sing 80 n n CBF HBF 2PQ sing 81 n n CBF HBFA 2PQ sing 82 n n CBF HBFB 2PQ sing 83 n n CBG HBG 2PQ sing 84 n n CBG HBGA 2PQ sing 85 n n CBG HBGB 2PQ sing 86 n n OBR CBB 2PQ doub 87 n n OBC CBB 2PQ sing 88 n n OBC HOBC 2PQ sing 89 n n # _atom_sites.entry_id 3GBK _atom_sites.fract_transf_matrix[1][1] 0.017698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000327 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01125 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2PQ A 1 1385 1385 2PQ 2PQ . D 3 HOH A 1 5 5 HOH HOH . D 3 HOH A 2 8 8 HOH HOH . D 3 HOH A 3 9 9 HOH HOH . D 3 HOH A 4 14 14 HOH HOH . D 3 HOH A 5 18 18 HOH HOH . D 3 HOH A 6 19 19 HOH HOH . D 3 HOH A 7 20 20 HOH HOH . D 3 HOH A 8 21 21 HOH HOH . D 3 HOH A 9 22 22 HOH HOH . D 3 HOH A 10 24 24 HOH HOH . D 3 HOH A 11 25 25 HOH HOH . D 3 HOH A 12 26 26 HOH HOH . D 3 HOH A 13 29 29 HOH HOH . D 3 HOH A 14 32 32 HOH HOH . D 3 HOH A 15 35 35 HOH HOH . D 3 HOH A 16 37 37 HOH HOH . D 3 HOH A 17 41 41 HOH HOH . D 3 HOH A 18 42 42 HOH HOH . D 3 HOH A 19 45 45 HOH HOH . D 3 HOH A 20 46 46 HOH HOH . D 3 HOH A 21 47 47 HOH HOH . D 3 HOH A 22 48 48 HOH HOH . D 3 HOH A 23 50 50 HOH HOH . D 3 HOH A 24 51 51 HOH HOH . D 3 HOH A 25 52 52 HOH HOH . D 3 HOH A 26 53 53 HOH HOH . D 3 HOH A 27 54 54 HOH HOH . D 3 HOH A 28 61 61 HOH HOH . D 3 HOH A 29 62 62 HOH HOH . D 3 HOH A 30 66 66 HOH HOH . D 3 HOH A 31 68 68 HOH HOH . D 3 HOH A 32 70 70 HOH HOH . D 3 HOH A 33 72 72 HOH HOH . D 3 HOH A 34 73 73 HOH HOH . E 3 HOH B 1 1 1 HOH HOH . E 3 HOH B 2 2 2 HOH HOH . E 3 HOH B 3 3 3 HOH HOH . E 3 HOH B 4 4 4 HOH HOH . E 3 HOH B 5 6 6 HOH HOH . E 3 HOH B 6 7 7 HOH HOH . E 3 HOH B 7 10 10 HOH HOH . E 3 HOH B 8 11 11 HOH HOH . E 3 HOH B 9 12 12 HOH HOH . E 3 HOH B 10 13 13 HOH HOH . E 3 HOH B 11 15 15 HOH HOH . E 3 HOH B 12 16 16 HOH HOH . E 3 HOH B 13 17 17 HOH HOH . E 3 HOH B 14 23 23 HOH HOH . E 3 HOH B 15 27 27 HOH HOH . E 3 HOH B 16 28 28 HOH HOH . E 3 HOH B 17 30 30 HOH HOH . E 3 HOH B 18 31 31 HOH HOH . E 3 HOH B 19 33 33 HOH HOH . E 3 HOH B 20 34 34 HOH HOH . E 3 HOH B 21 36 36 HOH HOH . E 3 HOH B 22 38 38 HOH HOH . E 3 HOH B 23 39 39 HOH HOH . E 3 HOH B 24 40 40 HOH HOH . E 3 HOH B 25 43 43 HOH HOH . E 3 HOH B 26 44 44 HOH HOH . E 3 HOH B 27 49 49 HOH HOH . E 3 HOH B 28 55 55 HOH HOH . E 3 HOH B 29 56 56 HOH HOH . E 3 HOH B 30 57 57 HOH HOH . E 3 HOH B 31 58 58 HOH HOH . E 3 HOH B 32 59 59 HOH HOH . E 3 HOH B 33 60 60 HOH HOH . E 3 HOH B 34 63 63 HOH HOH . E 3 HOH B 35 64 64 HOH HOH . E 3 HOH B 36 65 65 HOH HOH . E 3 HOH B 37 67 67 HOH HOH . E 3 HOH B 38 69 69 HOH HOH . E 3 HOH B 39 71 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB 2PQ . . . C 2 32.911 -5.396 47.106 1 59.36 ? CAB 2PQ 1385 A 1 HETATM 2 C CAC 2PQ . . . C 2 32.777 -5.945 48.372 1 59.79 ? CAC 2PQ 1385 A 1 HETATM 3 C CAD 2PQ . . . C 2 32.956 -7.317 48.527 1 59.89 ? CAD 2PQ 1385 A 1 HETATM 4 C CAE 2PQ . . . C 2 33.271 -8.134 47.437 1 60.35 ? CAE 2PQ 1385 A 1 HETATM 5 C CAF 2PQ . . . C 2 33.399 -7.592 46.165 1 57 ? CAF 2PQ 1385 A 1 HETATM 6 C CAA 2PQ . . . C 2 33.218 -6.225 46.013 1 58.74 ? CAA 2PQ 1385 A 1 HETATM 7 C CAJ 2PQ . . . C 2 33.352 -5.658 44.755 1 57.96 ? CAJ 2PQ 1385 A 1 HETATM 8 C CAK 2PQ . . . C 2 34.544 -5.838 44.046 1 55.35 ? CAK 2PQ 1385 A 1 HETATM 9 C CAL 2PQ . . . C 2 34.702 -5.278 42.788 1 54.95 ? CAL 2PQ 1385 A 1 HETATM 10 C CAI 2PQ . . . C 2 32.285 -4.905 44.238 1 57.39 ? CAI 2PQ 1385 A 1 HETATM 11 C CAH 2PQ . . . C 2 32.441 -4.33 42.985 1 56.87 ? CAH 2PQ 1385 A 1 HETATM 12 C CAG 2PQ . . . C 2 33.641 -4.516 42.267 1 56 ? CAG 2PQ 1385 A 1 HETATM 13 C CBP 2PQ . . . C 2 33.731 -3.871 40.894 1 51.86 ? CBP 2PQ 1385 A 1 HETATM 14 O OBQ 2PQ . . . C 2 32.685 -3.705 40.285 1 54.6 ? OBQ 2PQ 1385 A 1 HETATM 15 C CAP 2PQ . . . C 2 35.075 -3.484 40.282 1 51.15 ? CAP 2PQ 1385 A 1 HETATM 16 C CAO 2PQ . . . C 2 35.206 -3.471 38.887 1 48.93 ? CAO 2PQ 1385 A 1 HETATM 17 C CAN 2PQ . . . C 2 36.438 -3.16 38.294 1 49.34 ? CAN 2PQ 1385 A 1 HETATM 18 C CBM 2PQ . . . C 2 36.531 -3.136 36.761 1 48.37 ? CBM 2PQ 1385 A 1 HETATM 19 C CBN 2PQ . . . C 2 35.506 -3.963 36.007 1 49.22 ? CBN 2PQ 1385 A 1 HETATM 20 C CBO 2PQ . . . C 2 35.537 -3.554 34.544 1 48.53 ? CBO 2PQ 1385 A 1 HETATM 21 C CAQ 2PQ . . . C 2 36.19 -3.182 41.089 1 50.43 ? CAQ 2PQ 1385 A 1 HETATM 22 C CAR 2PQ . . . C 2 37.432 -2.857 40.513 1 48.99 ? CAR 2PQ 1385 A 1 HETATM 23 C CAM 2PQ . . . C 2 37.556 -2.855 39.115 1 48.42 ? CAM 2PQ 1385 A 1 HETATM 24 O OBL 2PQ . . . C 2 38.735 -2.533 38.481 1 48.01 ? OBL 2PQ 1385 A 1 HETATM 25 C CBK 2PQ . . . C 2 40.069 -2.57 39.079 1 44.02 ? CBK 2PQ 1385 A 1 HETATM 26 C CBJ 2PQ . . . C 2 41.053 -3.108 38.038 1 39.7 ? CBJ 2PQ 1385 A 1 HETATM 27 C CBI 2PQ . . . C 2 40.289 -3.654 36.822 1 42.99 ? CBI 2PQ 1385 A 1 HETATM 28 N NAX 2PQ . . . C 2 40.371 -5.163 36.613 1 43.33 ? NAX 2PQ 1385 A 1 HETATM 29 C CAY 2PQ . . . C 2 41.318 -5.998 37.408 1 44.38 ? CAY 2PQ 1385 A 1 HETATM 30 C CAZ 2PQ . . . C 2 40.66 -7.328 37.834 1 45.04 ? CAZ 2PQ 1385 A 1 HETATM 31 C CBA 2PQ . . . C 2 40.172 -8.123 36.634 1 42.69 ? CBA 2PQ 1385 A 1 HETATM 32 C CAV 2PQ . . . C 2 39.457 -7.216 35.607 1 44.76 ? CAV 2PQ 1385 A 1 HETATM 33 C CAW 2PQ . . . C 2 39.577 -5.803 35.616 1 44.39 ? CAW 2PQ 1385 A 1 HETATM 34 C CBH 2PQ . . . C 2 38.897 -5.023 34.664 1 44.14 ? CBH 2PQ 1385 A 1 HETATM 35 C CAT 2PQ . . . C 2 38.123 -5.619 33.684 1 43.49 ? CAT 2PQ 1385 A 1 HETATM 36 C CAS 2PQ . . . C 2 38.025 -7.01 33.644 1 44.74 ? CAS 2PQ 1385 A 1 HETATM 37 C CAU 2PQ . . . C 2 38.674 -7.817 34.611 1 44.69 ? CAU 2PQ 1385 A 1 HETATM 38 O OBE 2PQ . . . C 2 38.644 -9.209 34.639 1 43.26 ? OBE 2PQ 1385 A 1 HETATM 39 C CBD 2PQ . . . C 2 37.667 -10.097 34.09 1 46.49 ? CBD 2PQ 1385 A 1 HETATM 40 C CBF 2PQ . . . C 2 38.045 -11.548 34.448 1 46.48 ? CBF 2PQ 1385 A 1 HETATM 41 C CBG 2PQ . . . C 2 36.307 -9.764 34.69 1 44.48 ? CBG 2PQ 1385 A 1 HETATM 42 C CBB 2PQ . . . C 2 37.612 -9.971 32.55 1 47.82 ? CBB 2PQ 1385 A 1 HETATM 43 O OBR 2PQ . . . C 2 38.574 -10.402 31.875 1 48.98 ? OBR 2PQ 1385 A 1 HETATM 44 O OBC 2PQ . . . C 2 36.595 -9.42 32.075 1 51.02 ? OBC 2PQ 1385 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 44 #