data_3GCH # _model_server_result.job_id 13ZlvzVHlHiEqdKw2sGhMg _model_server_result.datetime_utc '2024-11-22 12:26:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gch # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":246}' # _entry.id 3GCH # _exptl.entry_id 3GCH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.2 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRANS-O-HYDROXY-ALPHA-METHYL CINNAMATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GCH _cell.length_a 69.7 _cell.length_b 69.7 _cell.length_c 97.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GCH _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1,2 A,B,C,D,E,F,G 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 69.7 139.4 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 1 A CYS 1 1_555 B SG CYS 107 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? disulf ? disulf2 B SG CYS 27 B CYS 42 1_555 B SG CYS 43 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf3 B SG CYS 121 B CYS 136 1_555 C SG CYS 53 C CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf4 C SG CYS 20 C CYS 168 1_555 C SG CYS 34 C CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? disulf ? disulf5 C SG CYS 43 C CYS 191 1_555 C SG CYS 72 C CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? covale ? covale1 C CB SER 47 C SER 195 1_555 D O OAC . C OAC 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? covale ? covale2 C CB SER 47 C SER 195 1_555 D C OAC . C OAC 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? covale ? covale3 C OG SER 47 C SER 195 1_555 D C OAC . C OAC 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.543 ? # _chem_comp.formula 'C10 H12 O3' _chem_comp.formula_weight 180.2 _chem_comp.id OAC _chem_comp.mon_nstd_flag . _chem_comp.name 'TRANS-O-HYDROXY-ALPHA-METHYL CINNAMATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C OAC doub 237 n n C CA OAC sing 238 n n C OXT OAC sing 239 n n CA CB1 OAC sing 240 n n CA CB2 OAC sing 241 n n CA HA OAC sing 242 n n CB1 CG OAC sing 243 n n CB1 HB11 OAC sing 244 n n CB1 HB12 OAC sing 245 n n CB2 HB21 OAC sing 246 n n CB2 HB22 OAC sing 247 n n CB2 HB23 OAC sing 248 n n CG CD1 OAC doub 249 n y CG CD2 OAC sing 250 n y CD1 CE1 OAC sing 251 n y CD1 HD1 OAC sing 252 n n CE1 CZ OAC doub 253 n y CE1 HE1 OAC sing 254 n n CZ CE2 OAC sing 255 n y CZ HZ OAC sing 256 n n CE2 CD2 OAC doub 257 n y CE2 HE2 OAC sing 258 n n CD2 OH OAC sing 259 n n OH HH OAC sing 260 n n OXT HXT OAC sing 261 n n # _atom_sites.entry_id 3GCH _atom_sites.fract_transf_matrix[1][1] 0.014347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014347 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 OAC C 1 246 246 OAC CIN . E 5 HOH A 1 250 250 HOH HOH . E 5 HOH A 2 251 251 HOH HOH . E 5 HOH A 3 252 252 HOH HOH . E 5 HOH A 4 296 296 HOH HOH . F 5 HOH B 1 253 253 HOH HOH . F 5 HOH B 2 256 256 HOH HOH . F 5 HOH B 3 257 257 HOH HOH . F 5 HOH B 4 258 258 HOH HOH . F 5 HOH B 5 259 259 HOH HOH . F 5 HOH B 6 260 260 HOH HOH . F 5 HOH B 7 261 261 HOH HOH . F 5 HOH B 8 263 263 HOH HOH . F 5 HOH B 9 264 264 HOH HOH . F 5 HOH B 10 265 265 HOH HOH . F 5 HOH B 11 266 266 HOH HOH . F 5 HOH B 12 268 268 HOH HOH . F 5 HOH B 13 269 269 HOH HOH . F 5 HOH B 14 270 270 HOH HOH . F 5 HOH B 15 271 271 HOH HOH . F 5 HOH B 16 272 272 HOH HOH . F 5 HOH B 17 273 273 HOH HOH . F 5 HOH B 18 274 274 HOH HOH . F 5 HOH B 19 275 275 HOH HOH . F 5 HOH B 20 276 276 HOH HOH . F 5 HOH B 21 277 277 HOH HOH . F 5 HOH B 22 278 278 HOH HOH . F 5 HOH B 23 279 279 HOH HOH . F 5 HOH B 24 280 280 HOH HOH . F 5 HOH B 25 281 281 HOH HOH . F 5 HOH B 26 282 282 HOH HOH . F 5 HOH B 27 283 283 HOH HOH . F 5 HOH B 28 284 284 HOH HOH . F 5 HOH B 29 285 285 HOH HOH . F 5 HOH B 30 286 286 HOH HOH . F 5 HOH B 31 287 287 HOH HOH . F 5 HOH B 32 288 288 HOH HOH . F 5 HOH B 33 289 289 HOH HOH . F 5 HOH B 34 290 290 HOH HOH . F 5 HOH B 35 291 291 HOH HOH . F 5 HOH B 36 292 292 HOH HOH . F 5 HOH B 37 293 293 HOH HOH . F 5 HOH B 38 294 294 HOH HOH . F 5 HOH B 39 295 295 HOH HOH . F 5 HOH B 40 297 297 HOH HOH . F 5 HOH B 41 298 298 HOH HOH . F 5 HOH B 42 299 299 HOH HOH . F 5 HOH B 43 302 302 HOH HOH . F 5 HOH B 44 303 303 HOH HOH . F 5 HOH B 45 304 304 HOH HOH . F 5 HOH B 46 305 305 HOH HOH . F 5 HOH B 47 306 306 HOH HOH . F 5 HOH B 48 307 307 HOH HOH . F 5 HOH B 49 308 308 HOH HOH . F 5 HOH B 50 309 309 HOH HOH . F 5 HOH B 51 315 315 HOH HOH . F 5 HOH B 52 320 320 HOH HOH . G 5 HOH C 1 247 247 HOH HOH . G 5 HOH C 2 248 248 HOH HOH . G 5 HOH C 3 249 249 HOH HOH . G 5 HOH C 4 254 254 HOH HOH . G 5 HOH C 5 255 255 HOH HOH . G 5 HOH C 6 262 262 HOH HOH . G 5 HOH C 7 267 267 HOH HOH . G 5 HOH C 8 300 300 HOH HOH . G 5 HOH C 9 301 301 HOH HOH . G 5 HOH C 10 310 310 HOH HOH . G 5 HOH C 11 311 311 HOH HOH . G 5 HOH C 12 312 312 HOH HOH . G 5 HOH C 13 313 313 HOH HOH . G 5 HOH C 14 314 314 HOH HOH . G 5 HOH C 15 316 316 HOH HOH . G 5 HOH C 16 317 317 HOH HOH . G 5 HOH C 17 318 318 HOH HOH . G 5 HOH C 18 319 319 HOH HOH . G 5 HOH C 19 321 321 HOH HOH . G 5 HOH C 20 322 322 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O OAC . . . D 4 36.722 76.653 84.018 1 21.15 ? O OAC 246 C 1 HETATM 2 C C OAC . . . D 4 37.307 76.922 85.206 1 19.54 ? C OAC 246 C 1 HETATM 3 C CA OAC . . . D 4 36.803 76.858 86.713 1 20.12 ? CA OAC 246 C 1 HETATM 4 C CB1 OAC . . . D 4 37.791 77.26 87.815 1 17.6 ? CB1 OAC 246 C 1 HETATM 5 C CB2 OAC . . . D 4 35.409 76.434 86.583 1 20.47 ? CB2 OAC 246 C 1 HETATM 6 C CG OAC . . . D 4 37.679 77.242 89.373 1 17.58 ? CG OAC 246 C 1 HETATM 7 C CD1 OAC . . . D 4 36.465 76.884 90.023 1 17.13 ? CD1 OAC 246 C 1 HETATM 8 C CE1 OAC . . . D 4 36.33 76.865 91.362 1 17.12 ? CE1 OAC 246 C 1 HETATM 9 C CZ OAC . . . D 4 37.358 77.282 92.173 1 17.59 ? CZ OAC 246 C 1 HETATM 10 C CE2 OAC . . . D 4 38.661 77.698 91.611 1 18.44 ? CE2 OAC 246 C 1 HETATM 11 C CD2 OAC . . . D 4 38.811 77.648 90.09 1 17.83 ? CD2 OAC 246 C 1 HETATM 12 O OH OAC . . . D 4 40.101 78.045 89.582 1 18.26 ? OH OAC 246 C 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #