data_3GCV # _model_server_result.job_id Hcg-mpbuH3RF_mP92hP6rQ _model_server_result.datetime_utc '2024-10-10 05:14:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gcv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3GCV # _exptl.entry_id 3GCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.602 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{3-[(6-aminoquinazolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(3-methylphenyl)-1H-pyrazol-5-yl]urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GCV _cell.length_a 67.785 _cell.length_b 70.003 _cell.length_c 74.513 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H30 N8 O' _chem_comp.formula_weight 506.602 _chem_comp.id SS6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-{3-[(6-aminoquinazolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(3-methylphenyl)-1H-pyrazol-5-yl]urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 SS6 doub 338 n y C4 N3 SS6 sing 339 n y C4 CAO SS6 sing 340 n y C5 C6 SS6 sing 341 n y C5 CAS SS6 sing 342 n y C6 N1 SS6 doub 343 n y C6 NAY SS6 sing 344 n n N1 C2 SS6 sing 345 n y N3 C2 SS6 doub 346 n y CAA CBA SS6 sing 347 n n CAA HAA SS6 sing 348 n n CAA HAAA SS6 sing 349 n n CAA HAAB SS6 sing 350 n n CBA CAP SS6 doub 351 n y CBA CAJ SS6 sing 352 n y CAP CBE SS6 sing 353 n y CAP HAP SS6 sing 354 n n CAJ CAH SS6 doub 355 n y CAJ HAJ SS6 sing 356 n n CAH CAM SS6 sing 357 n y CAH HAH SS6 sing 358 n n CAM CBE SS6 doub 359 n y CAM HAM SS6 sing 360 n n CBE NBK SS6 sing 361 n y NBK NAV SS6 sing 362 n y NBK CBG SS6 sing 363 n y NAV CBF SS6 doub 364 n y CBF CBL SS6 sing 365 n n CBF CAR SS6 sing 366 n y CBL CAC SS6 sing 367 n n CBL CAD SS6 sing 368 n n CBL CAB SS6 sing 369 n n CAC HAC SS6 sing 370 n n CAC HACA SS6 sing 371 n n CAC HACB SS6 sing 372 n n CAD HAD SS6 sing 373 n n CAD HADA SS6 sing 374 n n CAD HADB SS6 sing 375 n n CAB HAB SS6 sing 376 n n CAB HABA SS6 sing 377 n n CAB HABB SS6 sing 378 n n CAR CBG SS6 doub 379 n y CAR HAR SS6 sing 380 n n NAX CBG SS6 sing 381 n n NAX CAZ SS6 sing 382 n n CAZ OAF SS6 doub 383 n n CAZ NAW SS6 sing 384 n n NAW CBC SS6 sing 385 n n NAW HNAW SS6 sing 386 n n CBC CAQ SS6 doub 387 n y CBC CAK SS6 sing 388 n y CAQ CBD SS6 sing 389 n y CAQ HAQ SS6 sing 390 n n CAK CAG SS6 doub 391 n y CAK HAK SS6 sing 392 n n CAG CAL SS6 sing 393 n y CAG HAG SS6 sing 394 n n CAL CBD SS6 doub 395 n y CAL HAL SS6 sing 396 n n CBD NAY SS6 sing 397 n n CAS CBB SS6 doub 398 n y CAS HAS SS6 sing 399 n n CBB NAE SS6 sing 400 n n CBB CAN SS6 sing 401 n y NAE HNAE SS6 sing 402 n n NAE HNAA SS6 sing 403 n n CAN CAO SS6 doub 404 n y CAN HAN SS6 sing 405 n n CAO HAO SS6 sing 406 n n C2 H2 SS6 sing 407 n n NAX H29 SS6 sing 408 n n NAY H30 SS6 sing 409 n n # _atom_sites.entry_id 3GCV _atom_sites.fract_transf_matrix[1][1] 0.014753 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SS6 A 1 361 1 SS6 SS6 . C 3 BOG A 1 362 1 BOG BOG . D 3 BOG A 1 363 1 BOG BOG . E 4 HOH A 1 364 1 HOH HOH . E 4 HOH A 2 365 2 HOH HOH . E 4 HOH A 3 366 3 HOH HOH . E 4 HOH A 4 367 4 HOH HOH . E 4 HOH A 5 368 5 HOH HOH . E 4 HOH A 6 369 6 HOH HOH . E 4 HOH A 7 370 7 HOH HOH . E 4 HOH A 8 371 8 HOH HOH . E 4 HOH A 9 372 9 HOH HOH . E 4 HOH A 10 373 10 HOH HOH . E 4 HOH A 11 374 11 HOH HOH . E 4 HOH A 12 375 12 HOH HOH . E 4 HOH A 13 376 13 HOH HOH . E 4 HOH A 14 377 14 HOH HOH . E 4 HOH A 15 378 15 HOH HOH . E 4 HOH A 16 379 16 HOH HOH . E 4 HOH A 17 380 17 HOH HOH . E 4 HOH A 18 381 18 HOH HOH . E 4 HOH A 19 382 19 HOH HOH . E 4 HOH A 20 383 20 HOH HOH . E 4 HOH A 21 384 21 HOH HOH . E 4 HOH A 22 385 22 HOH HOH . E 4 HOH A 23 386 23 HOH HOH . E 4 HOH A 24 387 24 HOH HOH . E 4 HOH A 25 388 25 HOH HOH . E 4 HOH A 26 389 28 HOH HOH . E 4 HOH A 27 390 29 HOH HOH . E 4 HOH A 28 391 30 HOH HOH . E 4 HOH A 29 392 31 HOH HOH . E 4 HOH A 30 393 33 HOH HOH . E 4 HOH A 31 394 34 HOH HOH . E 4 HOH A 32 395 35 HOH HOH . E 4 HOH A 33 396 36 HOH HOH . E 4 HOH A 34 397 37 HOH HOH . E 4 HOH A 35 398 38 HOH HOH . E 4 HOH A 36 399 39 HOH HOH . E 4 HOH A 37 400 40 HOH HOH . E 4 HOH A 38 401 41 HOH HOH . E 4 HOH A 39 402 42 HOH HOH . E 4 HOH A 40 403 43 HOH HOH . E 4 HOH A 41 404 44 HOH HOH . E 4 HOH A 42 405 45 HOH HOH . E 4 HOH A 43 406 46 HOH HOH . E 4 HOH A 44 407 47 HOH HOH . E 4 HOH A 45 408 48 HOH HOH . E 4 HOH A 46 409 49 HOH HOH . E 4 HOH A 47 410 50 HOH HOH . E 4 HOH A 48 411 51 HOH HOH . E 4 HOH A 49 412 52 HOH HOH . E 4 HOH A 50 413 53 HOH HOH . E 4 HOH A 51 414 54 HOH HOH . E 4 HOH A 52 415 55 HOH HOH . E 4 HOH A 53 416 56 HOH HOH . E 4 HOH A 54 417 57 HOH HOH . E 4 HOH A 55 418 58 HOH HOH . E 4 HOH A 56 419 59 HOH HOH . E 4 HOH A 57 420 60 HOH HOH . E 4 HOH A 58 421 61 HOH HOH . E 4 HOH A 59 422 62 HOH HOH . E 4 HOH A 60 423 63 HOH HOH . E 4 HOH A 61 424 64 HOH HOH . E 4 HOH A 62 425 65 HOH HOH . E 4 HOH A 63 426 66 HOH HOH . E 4 HOH A 64 427 67 HOH HOH . E 4 HOH A 65 428 68 HOH HOH . E 4 HOH A 66 429 69 HOH HOH . E 4 HOH A 67 430 70 HOH HOH . E 4 HOH A 68 431 71 HOH HOH . E 4 HOH A 69 432 72 HOH HOH . E 4 HOH A 70 433 73 HOH HOH . E 4 HOH A 71 434 74 HOH HOH . E 4 HOH A 72 435 75 HOH HOH . E 4 HOH A 73 436 76 HOH HOH . E 4 HOH A 74 437 78 HOH HOH . E 4 HOH A 75 438 79 HOH HOH . E 4 HOH A 76 439 80 HOH HOH . E 4 HOH A 77 440 81 HOH HOH . E 4 HOH A 78 441 82 HOH HOH . E 4 HOH A 79 442 83 HOH HOH . E 4 HOH A 80 443 84 HOH HOH . E 4 HOH A 81 444 85 HOH HOH . E 4 HOH A 82 445 86 HOH HOH . E 4 HOH A 83 446 87 HOH HOH . E 4 HOH A 84 447 88 HOH HOH . E 4 HOH A 85 448 89 HOH HOH . E 4 HOH A 86 449 90 HOH HOH . E 4 HOH A 87 450 91 HOH HOH . E 4 HOH A 88 451 92 HOH HOH . E 4 HOH A 89 452 93 HOH HOH . E 4 HOH A 90 453 94 HOH HOH . E 4 HOH A 91 454 95 HOH HOH . E 4 HOH A 92 455 96 HOH HOH . E 4 HOH A 93 456 97 HOH HOH . E 4 HOH A 94 457 98 HOH HOH . E 4 HOH A 95 458 99 HOH HOH . E 4 HOH A 96 459 100 HOH HOH . E 4 HOH A 97 460 101 HOH HOH . E 4 HOH A 98 461 103 HOH HOH . E 4 HOH A 99 462 104 HOH HOH . E 4 HOH A 100 463 105 HOH HOH . E 4 HOH A 101 464 106 HOH HOH . E 4 HOH A 102 465 107 HOH HOH . E 4 HOH A 103 466 108 HOH HOH . E 4 HOH A 104 467 109 HOH HOH . E 4 HOH A 105 468 111 HOH HOH . E 4 HOH A 106 469 112 HOH HOH . E 4 HOH A 107 470 113 HOH HOH . E 4 HOH A 108 471 116 HOH HOH . E 4 HOH A 109 472 117 HOH HOH . E 4 HOH A 110 473 118 HOH HOH . E 4 HOH A 111 474 119 HOH HOH . E 4 HOH A 112 475 120 HOH HOH . E 4 HOH A 113 476 121 HOH HOH . E 4 HOH A 114 477 122 HOH HOH . E 4 HOH A 115 478 123 HOH HOH . E 4 HOH A 116 479 124 HOH HOH . E 4 HOH A 117 480 125 HOH HOH . E 4 HOH A 118 481 126 HOH HOH . E 4 HOH A 119 482 127 HOH HOH . E 4 HOH A 120 483 128 HOH HOH . E 4 HOH A 121 484 129 HOH HOH . E 4 HOH A 122 485 130 HOH HOH . E 4 HOH A 123 486 131 HOH HOH . E 4 HOH A 124 487 132 HOH HOH . E 4 HOH A 125 488 133 HOH HOH . E 4 HOH A 126 489 134 HOH HOH . E 4 HOH A 127 490 135 HOH HOH . E 4 HOH A 128 491 136 HOH HOH . E 4 HOH A 129 492 137 HOH HOH . E 4 HOH A 130 493 138 HOH HOH . E 4 HOH A 131 494 139 HOH HOH . E 4 HOH A 132 495 140 HOH HOH . E 4 HOH A 133 496 141 HOH HOH . E 4 HOH A 134 497 142 HOH HOH . E 4 HOH A 135 498 143 HOH HOH . E 4 HOH A 136 499 144 HOH HOH . E 4 HOH A 137 500 145 HOH HOH . E 4 HOH A 138 501 146 HOH HOH . E 4 HOH A 139 502 147 HOH HOH . E 4 HOH A 140 503 148 HOH HOH . E 4 HOH A 141 504 149 HOH HOH . E 4 HOH A 142 505 150 HOH HOH . E 4 HOH A 143 506 151 HOH HOH . E 4 HOH A 144 507 152 HOH HOH . E 4 HOH A 145 508 153 HOH HOH . E 4 HOH A 146 509 154 HOH HOH . E 4 HOH A 147 510 155 HOH HOH . E 4 HOH A 148 511 156 HOH HOH . E 4 HOH A 149 512 157 HOH HOH . E 4 HOH A 150 513 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 SS6 . . . B 2 -3.155 3.661 -19.634 1 8.14 ? C4 SS6 361 A 1 HETATM 2 C C5 SS6 . . . B 2 -3.054 2.341 -19.149 1 8.68 ? C5 SS6 361 A 1 HETATM 3 C C6 SS6 . . . B 2 -2.864 2.163 -17.769 1 8.17 ? C6 SS6 361 A 1 HETATM 4 N N1 SS6 . . . B 2 -2.787 3.245 -16.954 1 8.07 ? N1 SS6 361 A 1 HETATM 5 N N3 SS6 . . . B 2 -3.057 4.674 -18.773 1 8.38 ? N3 SS6 361 A 1 HETATM 6 C CAA SS6 . . . B 2 1.987 -7.098 -8.62 1 9.5 ? CAA SS6 361 A 1 HETATM 7 C CBA SS6 . . . B 2 1.735 -6.313 -9.937 1 10.98 ? CBA SS6 361 A 1 HETATM 8 C CAP SS6 . . . B 2 2.236 -5.028 -10.065 1 8.06 ? CAP SS6 361 A 1 HETATM 9 C CAJ SS6 . . . B 2 1.01 -6.88 -10.98 1 8.48 ? CAJ SS6 361 A 1 HETATM 10 C CAH SS6 . . . B 2 0.809 -6.17 -12.156 1 8.51 ? CAH SS6 361 A 1 HETATM 11 C CAM SS6 . . . B 2 1.311 -4.872 -12.281 1 10.78 ? CAM SS6 361 A 1 HETATM 12 C CBE SS6 . . . B 2 2.021 -4.303 -11.216 1 9.47 ? CBE SS6 361 A 1 HETATM 13 N NBK SS6 . . . B 2 2.53 -3.06 -11.279 1 10.47 ? NBK SS6 361 A 1 HETATM 14 N NAV SS6 . . . B 2 3.668 -2.776 -10.857 1 6.83 ? NAV SS6 361 A 1 HETATM 15 C CBF SS6 . . . B 2 3.88 -1.486 -11.064 1 8.13 ? CBF SS6 361 A 1 HETATM 16 C CBL SS6 . . . B 2 5.195 -0.789 -10.636 1 8.79 ? CBL SS6 361 A 1 HETATM 17 C CAC SS6 . . . B 2 4.879 0.184 -9.493 1 7.09 ? CAC SS6 361 A 1 HETATM 18 C CAD SS6 . . . B 2 6.207 -1.85 -10.134 1 8.67 ? CAD SS6 361 A 1 HETATM 19 C CAB SS6 . . . B 2 5.793 -0.017 -11.788 1 6.91 ? CAB SS6 361 A 1 HETATM 20 C CAR SS6 . . . B 2 2.785 -0.944 -11.642 1 9.56 ? CAR SS6 361 A 1 HETATM 21 C CBG SS6 . . . B 2 1.937 -1.988 -11.824 1 10.18 ? CBG SS6 361 A 1 HETATM 22 N NAX SS6 . . . B 2 0.662 -1.922 -12.287 1 9.97 ? NAX SS6 361 A 1 HETATM 23 C CAZ SS6 . . . B 2 0.086 -0.981 -13.082 1 9.27 ? CAZ SS6 361 A 1 HETATM 24 O OAF SS6 . . . B 2 0.729 -0.176 -13.759 1 9.55 ? OAF SS6 361 A 1 HETATM 25 N NAW SS6 . . . B 2 -1.249 -1.065 -13.159 1 9.49 ? NAW SS6 361 A 1 HETATM 26 C CBC SS6 . . . B 2 -2.146 -0.355 -13.906 1 8.26 ? CBC SS6 361 A 1 HETATM 27 C CAQ SS6 . . . B 2 -1.964 -0.059 -15.263 1 7.19 ? CAQ SS6 361 A 1 HETATM 28 C CAK SS6 . . . B 2 -3.323 0.075 -13.266 1 5.77 ? CAK SS6 361 A 1 HETATM 29 C CAG SS6 . . . B 2 -4.303 0.801 -13.943 1 7.36 ? CAG SS6 361 A 1 HETATM 30 C CAL SS6 . . . B 2 -4.109 1.083 -15.299 1 8.01 ? CAL SS6 361 A 1 HETATM 31 C CBD SS6 . . . B 2 -2.94 0.662 -15.954 1 8.08 ? CBD SS6 361 A 1 HETATM 32 N NAY SS6 . . . B 2 -2.76 0.929 -17.253 1 9.13 ? NAY SS6 361 A 1 HETATM 33 C CAS SS6 . . . B 2 -3.149 1.252 -20.049 1 9.08 ? CAS SS6 361 A 1 HETATM 34 C CBB SS6 . . . B 2 -3.328 1.475 -21.429 1 11.35 ? CBB SS6 361 A 1 HETATM 35 N NAE SS6 . . . B 2 -3.431 0.436 -22.309 1 11.55 ? NAE SS6 361 A 1 HETATM 36 C CAN SS6 . . . B 2 -3.41 2.809 -21.896 1 10.39 ? CAN SS6 361 A 1 HETATM 37 C CAO SS6 . . . B 2 -3.32 3.906 -21.002 1 10.61 ? CAO SS6 361 A 1 HETATM 38 C C2 SS6 . . . B 2 -2.883 4.473 -17.459 1 7.96 ? C2 SS6 361 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #