data_3GD2
#
_model_server_result.job_id            Ky83giN2BDum9Z9Z4Sp5vQ 
_model_server_result.datetime_utc      '2025-04-27 16:11:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gd2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    3GD2 
#
_exptl.entry_id    3GD2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              606.944 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-[(E)-2-(2-chloro-4-{[3-{[(R)-(2,6-dichlorophenyl)(hydroxy)-lambda~4~-sulfanyl]methyl}-5-(1-methylethyl)isoxazol-4-yl]methoxy}phenyl)ethenyl]benzoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3GD2 
_cell.length_a            158.749 
_cell.length_b            158.749 
_cell.length_c            158.749 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GD2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        196 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C29 H26 Cl3 N O5 S' 
_chem_comp.formula_weight    606.944 
_chem_comp.id                708 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-[(E)-2-(2-chloro-4-{[3-{[(R)-(2,6-dichlorophenyl)(hydroxy)-lambda~4~-sulfanyl]methyl}-5-(1-methylethyl)isoxazol-4-yl]methoxy}phenyl)ethenyl]benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL38 C37 708 sing 1 n n 
C25 C37 708 doub 2 n y 
C37 C39 708 sing 3 n y 
C26 C25 708 sing 4 n n 
C25 C24 708 sing 5 n y 
C27 C26 708 doub 6 n n 
C26 H26 708 sing 7 e n 
C28 C27 708 sing 8 n n 
C27 H27 708 sing 9 n n 
C33 C28 708 doub 10 n y 
C29 C28 708 sing 11 n y 
C32 C33 708 sing 12 n y 
C33 H33 708 sing 13 n n 
C34 C32 708 sing 14 n n 
C31 C32 708 doub 15 n y 
O35 C34 708 doub 16 n n 
C34 O36 708 sing 17 n n 
O36 HO36 708 sing 18 n n 
C31 C30 708 sing 19 n y 
C31 H31 708 sing 20 n n 
C30 C29 708 doub 21 n y 
C30 H30 708 sing 22 n n 
C29 H29 708 sing 23 n n 
C24 C23 708 doub 24 n y 
C24 H24 708 sing 25 n n 
C23 C22 708 sing 26 n y 
C23 H23 708 sing 27 n n 
C39 C22 708 doub 28 n y 
C39 H39 708 sing 29 n n 
C22 O21 708 sing 30 n n 
O21 C20 708 sing 31 n n 
C20 C19 708 sing 32 n n 
C20 H20 708 sing 33 n n 
C20 H20A 708 sing 34 n n 
C4 C19 708 doub 35 n y 
C19 C7 708 sing 36 n y 
C2 C4 708 sing 37 n n 
C4 O5 708 sing 38 n y 
C1 C2 708 sing 39 n n 
C2 C3 708 sing 40 n n 
C2 H2 708 sing 41 n n 
C3 H3 708 sing 42 n n 
C3 H3A 708 sing 43 n n 
C3 H3B 708 sing 44 n n 
C1 H1 708 sing 45 n n 
C1 H1A 708 sing 46 n n 
C1 H1B 708 sing 47 n n 
C7 C8 708 sing 48 n n 
C7 N6 708 doub 49 n y 
O5 N6 708 sing 50 n y 
C8 S9 708 sing 51 n n 
C8 H8 708 sing 52 n n 
C8 H8A 708 sing 53 n n 
C11 S9 708 sing 54 n n 
S9 O10 708 sing 55 n n 
O10 HO10 708 sing 56 n n 
C17 C11 708 doub 57 n y 
C12 C11 708 sing 58 n y 
C16 C17 708 sing 59 n y 
CL18 C17 708 sing 60 n n 
C15 C16 708 doub 61 n y 
C16 H16 708 sing 62 n n 
C15 C14 708 sing 63 n y 
C15 H15 708 sing 64 n n 
C14 C12 708 doub 65 n y 
C14 H14 708 sing 66 n n 
C12 CL13 708 sing 67 n n 
S9 HS9 708 sing 68 n n 
#
_atom_sites.entry_id                     3GD2 
_atom_sites.fract_transf_matrix[1][1]    0.006299 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006299 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006299 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 708 A 1 1 1 708 708 . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 6 6 HOH HOH . 
D 4 HOH A 6 10 10 HOH HOH . 
D 4 HOH A 7 11 11 HOH HOH . 
D 4 HOH A 8 13 13 HOH HOH . 
D 4 HOH A 9 14 14 HOH HOH . 
D 4 HOH A 10 15 15 HOH HOH . 
D 4 HOH A 11 27 27 HOH HOH . 
D 4 HOH A 12 29 29 HOH HOH . 
D 4 HOH A 13 30 30 HOH HOH . 
D 4 HOH A 14 32 32 HOH HOH . 
D 4 HOH A 15 33 33 HOH HOH . 
D 4 HOH A 16 34 34 HOH HOH . 
D 4 HOH A 17 37 37 HOH HOH . 
D 4 HOH A 18 42 42 HOH HOH . 
D 4 HOH A 19 43 43 HOH HOH . 
D 4 HOH A 20 44 44 HOH HOH . 
D 4 HOH A 21 45 45 HOH HOH . 
D 4 HOH A 22 47 47 HOH HOH . 
D 4 HOH A 23 48 48 HOH HOH . 
D 4 HOH A 24 49 49 HOH HOH . 
D 4 HOH A 25 473 3 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 CL CL38 708 . . . C 3 129.066 157.923 20.445 1 78.14 ? CL38 708 1 A 1 
HETATM 2 C C37 708 . . . C 3 130.803 157.817 20.838 1 77.73 ? C37 708 1 A 1 
HETATM 3 C C25 708 . . . C 3 131.639 156.778 20.42 1 78.14 ? C25 708 1 A 1 
HETATM 4 C C26 708 . . . C 3 131.251 155.677 19.509 1 78 ? C26 708 1 A 1 
HETATM 5 C C27 708 . . . C 3 130.106 155.695 18.836 1 80.26 ? C27 708 1 A 1 
HETATM 6 C C28 708 . . . C 3 129.71 154.678 17.835 1 80.66 ? C28 708 1 A 1 
HETATM 7 C C33 708 . . . C 3 128.518 154.924 17.16 1 81.06 ? C33 708 1 A 1 
HETATM 8 C C32 708 . . . C 3 128.061 154.057 16.176 1 81.07 ? C32 708 1 A 1 
HETATM 9 C C34 708 . . . C 3 126.767 154.361 15.485 1 81.28 ? C34 708 1 A 1 
HETATM 10 O O36 708 . . . C 3 126.028 155.399 15.891 1 81.55 ? O36 708 1 A 1 
HETATM 11 O O35 708 . . . C 3 126.397 153.691 14.528 1 82.93 ? O35 708 1 A 1 
HETATM 12 C C31 708 . . . C 3 128.812 152.935 15.842 1 80.99 ? C31 708 1 A 1 
HETATM 13 C C30 708 . . . C 3 130.019 152.694 16.501 1 81.25 ? C30 708 1 A 1 
HETATM 14 C C29 708 . . . C 3 130.479 153.563 17.492 1 81.25 ? C29 708 1 A 1 
HETATM 15 C C24 708 . . . C 3 132.981 156.817 20.792 1 77.9 ? C24 708 1 A 1 
HETATM 16 C C23 708 . . . C 3 133.463 157.848 21.594 1 77.84 ? C23 708 1 A 1 
HETATM 17 C C39 708 . . . C 3 131.281 158.842 21.638 1 77.46 ? C39 708 1 A 1 
HETATM 18 C C22 708 . . . C 3 132.606 158.865 22.018 1 77.26 ? C22 708 1 A 1 
HETATM 19 O O21 708 . . . C 3 133.012 159.897 22.802 1 76.55 ? O21 708 1 A 1 
HETATM 20 C C20 708 . . . C 3 134.365 160.063 23.186 1 74.79 ? C20 708 1 A 1 
HETATM 21 C C19 708 . . . C 3 134.454 161.233 24.123 1 73.89 ? C19 708 1 A 1 
HETATM 22 C C4 708 . . . C 3 135.42 162.336 23.99 1 73.05 ? C4 708 1 A 1 
HETATM 23 C C2 708 . . . C 3 136.517 162.647 23.047 1 72.72 ? C2 708 1 A 1 
HETATM 24 C C3 708 . . . C 3 137.752 161.869 23.495 1 72.34 ? C3 708 1 A 1 
HETATM 25 C C1 708 . . . C 3 136.787 164.149 22.955 1 72.82 ? C1 708 1 A 1 
HETATM 26 C C7 708 . . . C 3 133.669 161.514 25.255 1 73.22 ? C7 708 1 A 1 
HETATM 27 N N6 708 . . . C 3 134.08 162.674 25.825 1 72.97 ? N6 708 1 A 1 
HETATM 28 O O5 708 . . . C 3 135.168 163.162 25.028 1 73.57 ? O5 708 1 A 1 
HETATM 29 C C8 708 . . . C 3 132.554 160.667 25.81 1 73.31 ? C8 708 1 A 1 
HETATM 30 S S9 708 . . . C 3 133.24 159.571 27.11 1 73.63 ? S9 708 1 A 1 
HETATM 31 O O10 708 . . . C 3 131.844 158.772 27.892 1 74.87 ? O10 708 1 A 1 
HETATM 32 C C11 708 . . . C 3 134.032 158.236 26.154 1 73.72 ? C11 708 1 A 1 
HETATM 33 C C17 708 . . . C 3 133.294 157.273 25.474 1 73.65 ? C17 708 1 A 1 
HETATM 34 CL CL18 708 . . . C 3 131.504 157.278 25.471 1 73.61 ? CL18 708 1 A 1 
HETATM 35 C C16 708 . . . C 3 133.94 156.275 24.759 1 73.76 ? C16 708 1 A 1 
HETATM 36 C C15 708 . . . C 3 135.327 156.236 24.725 1 73.81 ? C15 708 1 A 1 
HETATM 37 C C14 708 . . . C 3 136.068 157.193 25.402 1 73.65 ? C14 708 1 A 1 
HETATM 38 C C12 708 . . . C 3 135.415 158.185 26.118 1 73.64 ? C12 708 1 A 1 
HETATM 39 CL CL13 708 . . . C 3 136.366 159.418 26.998 1 74.03 ? CL13 708 1 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           39 
#