data_3GDX # _model_server_result.job_id P1hL6Mufs8ggybrgFj7H6A _model_server_result.datetime_utc '2024-11-04 23:43:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gdx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":346}' # _entry.id 3GDX # _exptl.entry_id 3GDX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 516.176 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]thymidine" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.9 _cell.angle_gamma 90 _cell.entry_id 3GDX _cell.length_a 50.5 _cell.length_b 79.7 _cell.length_c 55.3 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GDX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 L O HOH . A HOH 1 1_555 F MG MG . A MG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc2 L O HOH . A HOH 2 1_555 G MG MG . A MG 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc3 A O LYS 51 A LYS 60 1_555 I NA NA . A NA 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc4 A O LEU 53 A LEU 62 1_555 I NA NA . A NA 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc5 A O VAL 56 A VAL 65 1_555 I NA NA . A NA 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc6 A O THR 92 A THR 101 1_555 H NA NA . A NA 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc7 A O VAL 94 A VAL 103 1_555 H NA NA . A NA 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc8 A O ILE 97 A ILE 106 1_555 H NA NA . A NA 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc9 A OD1 ASP 181 A ASP 190 1_555 F MG MG . A MG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.795 ? metalc ? metalc10 A OD2 ASP 181 A ASP 190 1_555 G MG MG . A MG 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc11 A OD2 ASP 183 A ASP 192 1_555 F MG MG . A MG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc12 A OD1 ASP 183 A ASP 192 1_555 G MG MG . A MG 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc13 A OD2 ASP 247 A ASP 256 1_555 G MG MG . A MG 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc14 E O1A 4BD . A 4BD 346 1_555 F MG MG . A MG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc15 E O2B 4BD . A 4BD 346 1_555 F MG MG . A MG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc16 E O3G 4BD . A 4BD 346 1_555 F MG MG . A MG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc17 E O1A 4BD . A 4BD 346 1_555 G MG MG . A MG 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc18 G MG MG . A MG 348 1_555 C O3' DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc19 H NA NA . A NA 349 1_555 L O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc20 H NA NA . A NA 349 1_555 C OP1 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc21 H NA NA . A NA 349 1_555 N O HOH . P HOH 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc22 I NA NA . A NA 350 1_555 D OP1 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc23 I NA NA . A NA 350 1_555 O O HOH . D HOH 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? hydrog WATSON-CRICK hydrog1 B N3 DC 1 T DC 1 1_555 D N1 DG 5 D DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N4 DC 1 T DC 1 1_555 D O6 DG 5 D DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O2 DC 1 T DC 1 1_555 D N2 DG 5 D DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N3 DC 2 T DC 2 1_555 D N1 DG 4 D DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N4 DC 2 T DC 2 1_555 D O6 DG 4 D DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O2 DC 2 T DC 2 1_555 D N2 DG 4 D DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N1 DG 3 T DG 3 1_555 D N3 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N2 DG 3 T DG 3 1_555 D O2 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B O6 DG 3 T DG 3 1_555 D N4 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N1 DA 4 T DA 4 1_555 D N3 DT 2 D DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N6 DA 4 T DA 4 1_555 D O4 DT 2 D DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N3 DC 5 T DC 5 1_555 D N1 DG 1 D DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N4 DC 5 T DC 5 1_555 D O6 DG 1 D DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B O2 DC 5 T DC 5 1_555 D N2 DG 1 D DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N1 DG 7 T DG 7 1_555 C N3 DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N2 DG 7 T DG 7 1_555 C O2 DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B O6 DG 7 T DG 7 1_555 C N4 DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N3 DC 8 T DC 8 1_555 C N1 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N4 DC 8 T DC 8 1_555 C O6 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B O2 DC 8 T DC 8 1_555 C N2 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N1 DG 9 T DG 9 1_555 C N3 DC 8 P DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N2 DG 9 T DG 9 1_555 C O2 DC 8 P DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B O6 DG 9 T DG 9 1_555 C N4 DC 8 P DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B N3 DC 10 T DC 10 1_555 C N1 DG 7 P DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N4 DC 10 T DC 10 1_555 C O6 DG 7 P DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B O2 DC 10 T DC 10 1_555 C N2 DG 7 P DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B N1 DA 11 T DA 11 1_555 C N3 DT 6 P DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B N6 DA 11 T DA 11 1_555 C O4 DT 6 P DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N3 DT 12 T DT 12 1_555 C N1 DA 5 P DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B O4 DT 12 T DT 12 1_555 C N6 DA 5 P DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 B N3 DC 13 T DC 13 1_555 C N1 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 B N4 DC 13 T DC 13 1_555 C O6 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 B O2 DC 13 T DC 13 1_555 C N2 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 B N1 DA 14 T DA 14 1_555 C N3 DT 3 P DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 B N6 DA 14 T DA 14 1_555 C O4 DT 3 P DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog36 B N1 DG 15 T DG 15 1_555 C N3 DC 2 P DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog37 B N2 DG 15 T DG 15 1_555 C O2 DC 2 P DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog38 B O6 DG 15 T DG 15 1_555 C N4 DC 2 P DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog39 B N3 DC 16 T DC 16 1_555 C N1 DG 1 P DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog40 B N4 DC 16 T DC 16 1_555 C O6 DG 1 P DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog41 B O2 DC 16 T DC 16 1_555 C N2 DG 1 P DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C11 H17 F2 N2 O13 P3' _chem_comp.formula_weight 516.176 _chem_comp.id 4BD _chem_comp.mon_nstd_flag . _chem_comp.name "5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]thymidine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5' PA 4BD sing 1 n n C3A PA 4BD sing 2 n n PA O2A 4BD doub 3 n n PA O1A 4BD sing 4 n n O1A HO1A 4BD sing 5 n n F1A C3A 4BD sing 6 n n PB C3A 4BD sing 7 n n C3A F2A 4BD sing 8 n n C5' O5' 4BD sing 9 n n O1B PB 4BD doub 10 n n PB O2B 4BD sing 11 n n PB O3B 4BD sing 12 n n O2B HO2B 4BD sing 13 n n O3B PG 4BD sing 14 n n PG O2G 4BD doub 15 n n PG O1G 4BD sing 16 n n PG O3G 4BD sing 17 n n O1G HO1G 4BD sing 18 n n O3G HO3G 4BD sing 19 n n C4' C5' 4BD sing 20 n n C5' H5' 4BD sing 21 n n C5' "H5'A" 4BD sing 22 n n C3' C4' 4BD sing 23 n n O4' C4' 4BD sing 24 n n C4' H4' 4BD sing 25 n n C1' O4' 4BD sing 26 n n C2' C1' 4BD sing 27 n n C1' N1 4BD sing 28 n n C1' H1' 4BD sing 29 n n C2 N1 4BD sing 30 n n N1 C6 4BD sing 31 n n C6 C5 4BD doub 32 n n C6 H6 4BD sing 33 n n O2 C2 4BD doub 34 n n C2 N3 4BD sing 35 n n N3 C4 4BD sing 36 n n N3 HN3 4BD sing 37 n n C4 O4 4BD doub 38 n n C4 C5 4BD sing 39 n n C5 C5M 4BD sing 40 n n C5M H5M 4BD sing 41 n n C5M H5MA 4BD sing 42 n n C5M H5MB 4BD sing 43 n n C2' C3' 4BD sing 44 n n C2' H2' 4BD sing 45 n n C2' "H2'A" 4BD sing 46 n n O3' C3' 4BD sing 47 n n C3' H3' 4BD sing 48 n n O3' HO3' 4BD sing 49 n n # _atom_sites.entry_id 3GDX _atom_sites.fract_transf_matrix[1][1] 0.019802 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006396 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 4BD A 1 346 338 4BD 4BD . F 6 MG A 1 347 339 MG MG . G 6 MG A 1 348 340 MG MG . H 7 NA A 1 349 341 NA NA . I 7 NA A 1 350 342 NA NA . J 8 CL A 1 351 343 CL CL . K 8 CL A 1 352 344 CL CL . L 9 HOH A 1 1 1 HOH HOH . L 9 HOH A 2 2 2 HOH HOH . L 9 HOH A 3 3 3 HOH HOH . L 9 HOH A 4 4 4 HOH HOH . L 9 HOH A 5 5 5 HOH HOH . L 9 HOH A 6 6 6 HOH HOH . L 9 HOH A 7 7 7 HOH HOH . L 9 HOH A 8 8 8 HOH HOH . L 9 HOH A 9 9 9 HOH HOH . L 9 HOH A 10 353 11 HOH HOH . L 9 HOH A 11 354 12 HOH HOH . L 9 HOH A 12 355 355 HOH HOH . L 9 HOH A 13 356 356 HOH HOH . L 9 HOH A 14 357 357 HOH HOH . L 9 HOH A 15 358 358 HOH HOH . L 9 HOH A 16 359 359 HOH HOH . L 9 HOH A 17 360 360 HOH HOH . L 9 HOH A 18 361 13 HOH HOH . L 9 HOH A 19 362 14 HOH HOH . L 9 HOH A 20 363 363 HOH HOH . L 9 HOH A 21 364 364 HOH HOH . L 9 HOH A 22 365 365 HOH HOH . L 9 HOH A 23 366 366 HOH HOH . L 9 HOH A 24 367 367 HOH HOH . L 9 HOH A 25 368 368 HOH HOH . L 9 HOH A 26 369 369 HOH HOH . L 9 HOH A 27 370 370 HOH HOH . L 9 HOH A 28 371 16 HOH HOH . L 9 HOH A 29 372 17 HOH HOH . L 9 HOH A 30 373 373 HOH HOH . L 9 HOH A 31 374 374 HOH HOH . L 9 HOH A 32 375 375 HOH HOH . L 9 HOH A 33 376 376 HOH HOH . L 9 HOH A 34 377 377 HOH HOH . L 9 HOH A 35 378 378 HOH HOH . L 9 HOH A 36 379 379 HOH HOH . L 9 HOH A 37 380 380 HOH HOH . L 9 HOH A 38 381 18 HOH HOH . L 9 HOH A 39 382 382 HOH HOH . L 9 HOH A 40 383 19 HOH HOH . L 9 HOH A 41 384 384 HOH HOH . L 9 HOH A 42 385 385 HOH HOH . L 9 HOH A 43 386 386 HOH HOH . L 9 HOH A 44 387 387 HOH HOH . L 9 HOH A 45 388 388 HOH HOH . L 9 HOH A 46 389 389 HOH HOH . L 9 HOH A 47 390 390 HOH HOH . L 9 HOH A 48 391 391 HOH HOH . L 9 HOH A 49 392 392 HOH HOH . L 9 HOH A 50 393 393 HOH HOH . L 9 HOH A 51 394 394 HOH HOH . L 9 HOH A 52 395 395 HOH HOH . L 9 HOH A 53 396 396 HOH HOH . L 9 HOH A 54 397 397 HOH HOH . L 9 HOH A 55 398 398 HOH HOH . L 9 HOH A 56 399 399 HOH HOH . L 9 HOH A 57 400 400 HOH HOH . L 9 HOH A 58 401 401 HOH HOH . L 9 HOH A 59 402 402 HOH HOH . L 9 HOH A 60 403 403 HOH HOH . L 9 HOH A 61 404 404 HOH HOH . L 9 HOH A 62 405 405 HOH HOH . L 9 HOH A 63 406 406 HOH HOH . L 9 HOH A 64 407 407 HOH HOH . L 9 HOH A 65 408 408 HOH HOH . L 9 HOH A 66 409 409 HOH HOH . L 9 HOH A 67 410 20 HOH HOH . L 9 HOH A 68 411 411 HOH HOH . L 9 HOH A 69 412 21 HOH HOH . L 9 HOH A 70 413 22 HOH HOH . L 9 HOH A 71 414 23 HOH HOH . L 9 HOH A 72 415 24 HOH HOH . L 9 HOH A 73 416 25 HOH HOH . L 9 HOH A 74 417 26 HOH HOH . L 9 HOH A 75 418 27 HOH HOH . L 9 HOH A 76 419 28 HOH HOH . L 9 HOH A 77 420 29 HOH HOH . L 9 HOH A 78 421 30 HOH HOH . L 9 HOH A 79 422 32 HOH HOH . L 9 HOH A 80 423 33 HOH HOH . L 9 HOH A 81 424 34 HOH HOH . L 9 HOH A 82 425 36 HOH HOH . L 9 HOH A 83 426 38 HOH HOH . L 9 HOH A 84 427 39 HOH HOH . L 9 HOH A 85 428 40 HOH HOH . L 9 HOH A 86 429 41 HOH HOH . L 9 HOH A 87 430 42 HOH HOH . L 9 HOH A 88 431 43 HOH HOH . L 9 HOH A 89 432 44 HOH HOH . L 9 HOH A 90 433 46 HOH HOH . L 9 HOH A 91 434 47 HOH HOH . L 9 HOH A 92 435 48 HOH HOH . L 9 HOH A 93 436 49 HOH HOH . L 9 HOH A 94 437 50 HOH HOH . L 9 HOH A 95 438 51 HOH HOH . L 9 HOH A 96 439 53 HOH HOH . L 9 HOH A 97 440 54 HOH HOH . L 9 HOH A 98 441 57 HOH HOH . L 9 HOH A 99 442 58 HOH HOH . L 9 HOH A 100 443 60 HOH HOH . L 9 HOH A 101 444 61 HOH HOH . L 9 HOH A 102 445 62 HOH HOH . L 9 HOH A 103 446 64 HOH HOH . L 9 HOH A 104 447 65 HOH HOH . L 9 HOH A 105 448 66 HOH HOH . L 9 HOH A 106 449 67 HOH HOH . L 9 HOH A 107 450 68 HOH HOH . L 9 HOH A 108 451 69 HOH HOH . L 9 HOH A 109 452 70 HOH HOH . L 9 HOH A 110 453 71 HOH HOH . L 9 HOH A 111 454 72 HOH HOH . L 9 HOH A 112 455 73 HOH HOH . L 9 HOH A 113 456 74 HOH HOH . L 9 HOH A 114 457 75 HOH HOH . L 9 HOH A 115 458 76 HOH HOH . L 9 HOH A 116 459 77 HOH HOH . L 9 HOH A 117 460 79 HOH HOH . L 9 HOH A 118 461 80 HOH HOH . L 9 HOH A 119 462 81 HOH HOH . L 9 HOH A 120 463 82 HOH HOH . L 9 HOH A 121 464 84 HOH HOH . L 9 HOH A 122 465 85 HOH HOH . L 9 HOH A 123 466 86 HOH HOH . L 9 HOH A 124 467 87 HOH HOH . L 9 HOH A 125 468 88 HOH HOH . L 9 HOH A 126 469 89 HOH HOH . L 9 HOH A 127 470 90 HOH HOH . L 9 HOH A 128 471 91 HOH HOH . L 9 HOH A 129 472 92 HOH HOH . L 9 HOH A 130 473 93 HOH HOH . L 9 HOH A 131 474 98 HOH HOH . L 9 HOH A 132 475 99 HOH HOH . L 9 HOH A 133 476 100 HOH HOH . L 9 HOH A 134 477 103 HOH HOH . L 9 HOH A 135 478 104 HOH HOH . L 9 HOH A 136 479 105 HOH HOH . L 9 HOH A 137 480 106 HOH HOH . L 9 HOH A 138 481 108 HOH HOH . L 9 HOH A 139 482 109 HOH HOH . L 9 HOH A 140 483 110 HOH HOH . L 9 HOH A 141 484 111 HOH HOH . L 9 HOH A 142 485 112 HOH HOH . L 9 HOH A 143 486 113 HOH HOH . L 9 HOH A 144 487 115 HOH HOH . L 9 HOH A 145 488 116 HOH HOH . L 9 HOH A 146 489 117 HOH HOH . L 9 HOH A 147 490 118 HOH HOH . L 9 HOH A 148 491 119 HOH HOH . L 9 HOH A 149 492 120 HOH HOH . L 9 HOH A 150 493 121 HOH HOH . L 9 HOH A 151 494 122 HOH HOH . L 9 HOH A 152 495 123 HOH HOH . L 9 HOH A 153 496 124 HOH HOH . L 9 HOH A 154 497 126 HOH HOH . L 9 HOH A 155 498 127 HOH HOH . L 9 HOH A 156 499 128 HOH HOH . L 9 HOH A 157 500 131 HOH HOH . L 9 HOH A 158 501 132 HOH HOH . L 9 HOH A 159 502 134 HOH HOH . L 9 HOH A 160 503 135 HOH HOH . L 9 HOH A 161 504 137 HOH HOH . L 9 HOH A 162 505 138 HOH HOH . L 9 HOH A 163 506 139 HOH HOH . L 9 HOH A 164 507 140 HOH HOH . L 9 HOH A 165 508 141 HOH HOH . L 9 HOH A 166 509 142 HOH HOH . L 9 HOH A 167 510 143 HOH HOH . L 9 HOH A 168 511 145 HOH HOH . L 9 HOH A 169 512 146 HOH HOH . L 9 HOH A 170 513 147 HOH HOH . L 9 HOH A 171 514 149 HOH HOH . L 9 HOH A 172 515 150 HOH HOH . L 9 HOH A 173 516 151 HOH HOH . L 9 HOH A 174 517 152 HOH HOH . L 9 HOH A 175 518 153 HOH HOH . L 9 HOH A 176 519 154 HOH HOH . L 9 HOH A 177 520 155 HOH HOH . L 9 HOH A 178 521 156 HOH HOH . L 9 HOH A 179 522 157 HOH HOH . L 9 HOH A 180 523 158 HOH HOH . L 9 HOH A 181 524 160 HOH HOH . L 9 HOH A 182 525 161 HOH HOH . L 9 HOH A 183 526 162 HOH HOH . L 9 HOH A 184 527 163 HOH HOH . L 9 HOH A 185 528 164 HOH HOH . L 9 HOH A 186 529 165 HOH HOH . L 9 HOH A 187 530 166 HOH HOH . L 9 HOH A 188 531 169 HOH HOH . L 9 HOH A 189 532 170 HOH HOH . L 9 HOH A 190 533 171 HOH HOH . L 9 HOH A 191 534 172 HOH HOH . L 9 HOH A 192 535 176 HOH HOH . L 9 HOH A 193 536 300 HOH HOH . L 9 HOH A 194 537 301 HOH HOH . L 9 HOH A 195 538 302 HOH HOH . L 9 HOH A 196 539 305 HOH HOH . L 9 HOH A 197 540 306 HOH HOH . L 9 HOH A 198 541 308 HOH HOH . L 9 HOH A 199 542 310 HOH HOH . L 9 HOH A 200 543 312 HOH HOH . L 9 HOH A 201 544 313 HOH HOH . L 9 HOH A 202 545 314 HOH HOH . L 9 HOH A 203 546 316 HOH HOH . L 9 HOH A 204 547 317 HOH HOH . L 9 HOH A 205 548 318 HOH HOH . L 9 HOH A 206 549 319 HOH HOH . L 9 HOH A 207 550 320 HOH HOH . L 9 HOH A 208 551 321 HOH HOH . L 9 HOH A 209 552 323 HOH HOH . L 9 HOH A 210 553 324 HOH HOH . L 9 HOH A 211 554 325 HOH HOH . L 9 HOH A 212 555 326 HOH HOH . L 9 HOH A 213 556 327 HOH HOH . L 9 HOH A 214 557 328 HOH HOH . L 9 HOH A 215 558 329 HOH HOH . L 9 HOH A 216 559 330 HOH HOH . L 9 HOH A 217 560 334 HOH HOH . L 9 HOH A 218 561 335 HOH HOH . L 9 HOH A 219 562 336 HOH HOH . L 9 HOH A 220 563 339 HOH HOH . L 9 HOH A 221 564 340 HOH HOH . L 9 HOH A 222 565 341 HOH HOH . L 9 HOH A 223 566 342 HOH HOH . L 9 HOH A 224 567 343 HOH HOH . L 9 HOH A 225 568 344 HOH HOH . M 9 HOH T 1 17 10 HOH HOH . M 9 HOH T 2 18 15 HOH HOH . M 9 HOH T 3 35 35 HOH HOH . M 9 HOH T 4 59 59 HOH HOH . M 9 HOH T 5 83 83 HOH HOH . M 9 HOH T 6 95 95 HOH HOH . M 9 HOH T 7 97 97 HOH HOH . M 9 HOH T 8 101 101 HOH HOH . M 9 HOH T 9 102 102 HOH HOH . M 9 HOH T 10 114 114 HOH HOH . M 9 HOH T 11 125 125 HOH HOH . M 9 HOH T 12 136 136 HOH HOH . M 9 HOH T 13 148 148 HOH HOH . M 9 HOH T 14 167 167 HOH HOH . M 9 HOH T 15 168 168 HOH HOH . M 9 HOH T 16 173 173 HOH HOH . M 9 HOH T 17 174 174 HOH HOH . M 9 HOH T 18 304 304 HOH HOH . M 9 HOH T 19 315 315 HOH HOH . M 9 HOH T 20 322 322 HOH HOH . M 9 HOH T 21 351 351 HOH HOH . M 9 HOH T 22 352 352 HOH HOH . M 9 HOH T 23 353 353 HOH HOH . M 9 HOH T 24 354 354 HOH HOH . M 9 HOH T 25 361 361 HOH HOH . M 9 HOH T 26 362 362 HOH HOH . M 9 HOH T 27 383 383 HOH HOH . M 9 HOH T 28 410 410 HOH HOH . N 9 HOH P 1 45 45 HOH HOH . N 9 HOH P 2 56 56 HOH HOH . N 9 HOH P 3 63 63 HOH HOH . N 9 HOH P 4 78 78 HOH HOH . N 9 HOH P 5 107 107 HOH HOH . N 9 HOH P 6 129 129 HOH HOH . N 9 HOH P 7 133 133 HOH HOH . N 9 HOH P 8 144 144 HOH HOH . N 9 HOH P 9 159 159 HOH HOH . N 9 HOH P 10 175 175 HOH HOH . N 9 HOH P 11 303 303 HOH HOH . N 9 HOH P 12 337 337 HOH HOH . O 9 HOH D 1 31 31 HOH HOH . O 9 HOH D 2 37 37 HOH HOH . O 9 HOH D 3 52 52 HOH HOH . O 9 HOH D 4 55 55 HOH HOH . O 9 HOH D 5 94 94 HOH HOH . O 9 HOH D 6 96 96 HOH HOH . O 9 HOH D 7 130 130 HOH HOH . O 9 HOH D 8 331 331 HOH HOH . O 9 HOH D 9 338 338 HOH HOH . O 9 HOH D 10 371 371 HOH HOH . O 9 HOH D 11 372 372 HOH HOH . O 9 HOH D 12 381 381 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA 4BD . . . E 5 5.188 5.44 14.944 1 18.62 ? PA 4BD 346 A 1 HETATM 2 O O1A 4BD . . . E 5 4.011 5.447 15.857 1 12.35 ? O1A 4BD 346 A 1 HETATM 3 O O2A 4BD . . . E 5 6.451 6.054 15.428 1 20.64 ? O2A 4BD 346 A 1 HETATM 4 C C3A 4BD . . . E 5 5.517 3.763 14.364 1 19.33 ? C3A 4BD 346 A 1 HETATM 5 F F1A 4BD . . . E 5 6.343 3.831 13.327 1 18.91 ? F1A 4BD 346 A 1 HETATM 6 F F2A 4BD . . . E 5 6.162 3.123 15.344 1 18.42 ? F2A 4BD 346 A 1 HETATM 7 O O5' 4BD . . . E 5 4.723 6.377 13.733 1 17.17 ? O5' 4BD 346 A 1 HETATM 8 P PB 4BD . . . E 5 4.116 2.756 13.879 1 15.02 ? PB 4BD 346 A 1 HETATM 9 O O1B 4BD . . . E 5 4.281 2.314 12.471 1 15.75 ? O1B 4BD 346 A 1 HETATM 10 O O2B 4BD . . . E 5 2.841 3.387 14.282 1 14.99 ? O2B 4BD 346 A 1 HETATM 11 O O3B 4BD . . . E 5 4.232 1.484 14.684 1 17.86 ? O3B 4BD 346 A 1 HETATM 12 P PG 4BD . . . E 5 4 1.277 16.169 1 21.8 ? PG 4BD 346 A 1 HETATM 13 O O1G 4BD . . . E 5 5.193 0.557 16.685 1 23 ? O1G 4BD 346 A 1 HETATM 14 O O2G 4BD . . . E 5 2.662 0.674 16.372 1 17.98 ? O2G 4BD 346 A 1 HETATM 15 O O3G 4BD . . . E 5 4.002 2.615 16.825 1 16.9 ? O3G 4BD 346 A 1 HETATM 16 C C5' 4BD . . . E 5 3.512 6.143 13.017 1 15.62 ? C5' 4BD 346 A 1 HETATM 17 C C4' 4BD . . . E 5 3.713 6.378 11.538 1 15.03 ? C4' 4BD 346 A 1 HETATM 18 O O4' 4BD . . . E 5 4.547 7.541 11.279 1 14.05 ? O4' 4BD 346 A 1 HETATM 19 C C1' 4BD . . . E 5 5.29 7.337 10.088 1 14.17 ? C1' 4BD 346 A 1 HETATM 20 N N1 4BD . . . E 5 6.737 7.47 10.39 1 15.93 ? N1 4BD 346 A 1 HETATM 21 C C6 4BD . . . E 5 7.219 7.163 11.645 1 18.93 ? C6 4BD 346 A 1 HETATM 22 C C2 4BD . . . E 5 7.594 7.874 9.378 1 18.01 ? C2 4BD 346 A 1 HETATM 23 O O2 4BD . . . E 5 7.218 8.202 8.265 1 17.78 ? O2 4BD 346 A 1 HETATM 24 N N3 4BD . . . E 5 8.923 7.877 9.724 1 17.34 ? N3 4BD 346 A 1 HETATM 25 C C4 4BD . . . E 5 9.471 7.531 10.942 1 16.66 ? C4 4BD 346 A 1 HETATM 26 O O4 4BD . . . E 5 10.688 7.526 11.079 1 16.61 ? O4 4BD 346 A 1 HETATM 27 C C5 4BD . . . E 5 8.517 7.174 11.973 1 16.96 ? C5 4BD 346 A 1 HETATM 28 C C5M 4BD . . . E 5 9.022 6.573 13.247 1 14.33 ? C5M 4BD 346 A 1 HETATM 29 C C2' 4BD . . . E 5 4.921 5.943 9.563 1 16.93 ? C2' 4BD 346 A 1 HETATM 30 C C3' 4BD . . . E 5 4.436 5.252 10.837 1 15.25 ? C3' 4BD 346 A 1 HETATM 31 O O3' 4BD . . . E 5 3.492 4.222 10.594 1 12.31 ? O3' 4BD 346 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #