data_3GFE # _model_server_result.job_id y_f7IH2GjGTarPC1mnS4Cw _model_server_result.datetime_utc '2025-01-23 17:33:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gfe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3GFE # _exptl.entry_id 3GFE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-cyclopropyl-3-{[1-(2,4-difluorophenyl)-7-methyl-6-oxo-6,7-dihydro-1H-pyrazolo[3,4-b]pyridin-4-yl]amino}-4-methylbenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GFE _cell.length_a 45.419 _cell.length_b 87.708 _cell.length_c 122.332 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GFE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H21 F2 N5 O2' _chem_comp.formula_weight 449.453 _chem_comp.id P37 _chem_comp.mon_nstd_flag . _chem_comp.name N-cyclopropyl-3-{[1-(2,4-difluorophenyl)-7-methyl-6-oxo-6,7-dihydro-1H-pyrazolo[3,4-b]pyridin-4-yl]amino}-4-methylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 P37 sing 237 n n N1 C1 P37 sing 238 n n N1 HN1 P37 sing 239 n n N3 C14 P37 doub 240 n y N3 N2 P37 sing 241 n y C4 C3 P37 sing 242 n n C4 C2 P37 sing 243 n n C4 H4 P37 sing 244 n n C4 H4A P37 sing 245 n n C5 C20 P37 doub 246 n y C5 C21 P37 sing 247 n y C5 C1 P37 sing 248 n n C6 C7 P37 doub 249 n y C6 C11 P37 sing 250 n y C6 F1 P37 sing 251 n n C7 C8 P37 sing 252 n y C7 H7 P37 sing 253 n n C8 C9 P37 doub 254 n y C8 F2 P37 sing 255 n n C10 C11 P37 doub 256 n y C10 C9 P37 sing 257 n y C10 H10 P37 sing 258 n n C13 C17 P37 sing 259 n n C13 C12 P37 doub 260 n y C13 C14 P37 sing 261 n y C15 C16 P37 sing 262 n n C15 O2 P37 doub 263 n n C15 N4 P37 sing 264 n n C17 N5 P37 sing 265 n n C17 C16 P37 doub 266 n n C20 C19 P37 sing 267 n y C20 H20 P37 sing 268 n n C21 C22 P37 doub 269 n y C21 H21 P37 sing 270 n n C22 C23 P37 sing 271 n y C22 H22 P37 sing 272 n n C24 C23 P37 sing 273 n n C24 H24 P37 sing 274 n n C24 H24A P37 sing 275 n n C24 H24B P37 sing 276 n n C3 C2 P37 sing 277 n n C3 H3 P37 sing 278 n n C3 H3A P37 sing 279 n n C2 H2 P37 sing 280 n n C1 O1 P37 doub 281 n n C23 C19 P37 doub 282 n y C19 N5 P37 sing 283 n n C16 H16 P37 sing 284 n n N4 C18 P37 sing 285 n n N4 C12 P37 sing 286 n n C18 H18 P37 sing 287 n n C18 H18A P37 sing 288 n n C18 H18B P37 sing 289 n n C12 N2 P37 sing 290 n y C14 H14 P37 sing 291 n n N2 C11 P37 sing 292 n y C9 H9 P37 sing 293 n n N5 H211 P37 sing 294 n n # _atom_sites.entry_id 3GFE _atom_sites.fract_transf_matrix[1][1] 0.022017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011401 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008174 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P37 A 1 361 1 P37 P37 . C 3 HOH A 1 362 1 HOH HOH . C 3 HOH A 2 363 2 HOH HOH . C 3 HOH A 3 364 3 HOH HOH . C 3 HOH A 4 365 4 HOH HOH . C 3 HOH A 5 366 5 HOH HOH . C 3 HOH A 6 367 6 HOH HOH . C 3 HOH A 7 368 7 HOH HOH . C 3 HOH A 8 369 8 HOH HOH . C 3 HOH A 9 370 9 HOH HOH . C 3 HOH A 10 371 10 HOH HOH . C 3 HOH A 11 372 11 HOH HOH . C 3 HOH A 12 373 12 HOH HOH . C 3 HOH A 13 374 13 HOH HOH . C 3 HOH A 14 375 14 HOH HOH . C 3 HOH A 15 376 15 HOH HOH . C 3 HOH A 16 377 16 HOH HOH . C 3 HOH A 17 378 17 HOH HOH . C 3 HOH A 18 379 18 HOH HOH . C 3 HOH A 19 380 19 HOH HOH . C 3 HOH A 20 381 20 HOH HOH . C 3 HOH A 21 382 21 HOH HOH . C 3 HOH A 22 383 22 HOH HOH . C 3 HOH A 23 384 23 HOH HOH . C 3 HOH A 24 385 24 HOH HOH . C 3 HOH A 25 386 25 HOH HOH . C 3 HOH A 26 387 26 HOH HOH . C 3 HOH A 27 388 27 HOH HOH . C 3 HOH A 28 389 28 HOH HOH . C 3 HOH A 29 390 29 HOH HOH . C 3 HOH A 30 391 30 HOH HOH . C 3 HOH A 31 392 31 HOH HOH . C 3 HOH A 32 393 32 HOH HOH . C 3 HOH A 33 394 33 HOH HOH . C 3 HOH A 34 395 34 HOH HOH . C 3 HOH A 35 396 35 HOH HOH . C 3 HOH A 36 397 36 HOH HOH . C 3 HOH A 37 398 37 HOH HOH . C 3 HOH A 38 399 38 HOH HOH . C 3 HOH A 39 400 39 HOH HOH . C 3 HOH A 40 401 40 HOH HOH . C 3 HOH A 41 402 41 HOH HOH . C 3 HOH A 42 403 42 HOH HOH . C 3 HOH A 43 404 43 HOH HOH . C 3 HOH A 44 405 44 HOH HOH . C 3 HOH A 45 406 45 HOH HOH . C 3 HOH A 46 407 46 HOH HOH . C 3 HOH A 47 408 47 HOH HOH . C 3 HOH A 48 409 48 HOH HOH . C 3 HOH A 49 410 49 HOH HOH . C 3 HOH A 50 411 50 HOH HOH . C 3 HOH A 51 412 51 HOH HOH . C 3 HOH A 52 413 52 HOH HOH . C 3 HOH A 53 414 53 HOH HOH . C 3 HOH A 54 415 54 HOH HOH . C 3 HOH A 55 416 55 HOH HOH . C 3 HOH A 56 417 56 HOH HOH . C 3 HOH A 57 418 57 HOH HOH . C 3 HOH A 58 419 58 HOH HOH . C 3 HOH A 59 420 59 HOH HOH . C 3 HOH A 60 421 60 HOH HOH . C 3 HOH A 61 422 61 HOH HOH . C 3 HOH A 62 423 62 HOH HOH . C 3 HOH A 63 424 63 HOH HOH . C 3 HOH A 64 425 64 HOH HOH . C 3 HOH A 65 426 65 HOH HOH . C 3 HOH A 66 427 66 HOH HOH . C 3 HOH A 67 428 67 HOH HOH . C 3 HOH A 68 429 68 HOH HOH . C 3 HOH A 69 430 69 HOH HOH . C 3 HOH A 70 431 70 HOH HOH . C 3 HOH A 71 432 71 HOH HOH . C 3 HOH A 72 433 72 HOH HOH . C 3 HOH A 73 434 73 HOH HOH . C 3 HOH A 74 435 74 HOH HOH . C 3 HOH A 75 436 75 HOH HOH . C 3 HOH A 76 437 76 HOH HOH . C 3 HOH A 77 438 77 HOH HOH . C 3 HOH A 78 439 78 HOH HOH . C 3 HOH A 79 440 79 HOH HOH . C 3 HOH A 80 441 80 HOH HOH . C 3 HOH A 81 442 81 HOH HOH . C 3 HOH A 82 443 82 HOH HOH . C 3 HOH A 83 444 83 HOH HOH . C 3 HOH A 84 445 84 HOH HOH . C 3 HOH A 85 446 85 HOH HOH . C 3 HOH A 86 447 86 HOH HOH . C 3 HOH A 87 448 87 HOH HOH . C 3 HOH A 88 449 88 HOH HOH . C 3 HOH A 89 450 89 HOH HOH . C 3 HOH A 90 451 90 HOH HOH . C 3 HOH A 91 452 91 HOH HOH . C 3 HOH A 92 453 92 HOH HOH . C 3 HOH A 93 454 93 HOH HOH . C 3 HOH A 94 455 94 HOH HOH . C 3 HOH A 95 456 95 HOH HOH . C 3 HOH A 96 457 96 HOH HOH . C 3 HOH A 97 458 97 HOH HOH . C 3 HOH A 98 459 98 HOH HOH . C 3 HOH A 99 460 99 HOH HOH . C 3 HOH A 100 461 100 HOH HOH . C 3 HOH A 101 462 101 HOH HOH . C 3 HOH A 102 463 102 HOH HOH . C 3 HOH A 103 464 103 HOH HOH . C 3 HOH A 104 465 104 HOH HOH . C 3 HOH A 105 466 105 HOH HOH . C 3 HOH A 106 467 106 HOH HOH . C 3 HOH A 107 468 107 HOH HOH . C 3 HOH A 108 469 108 HOH HOH . C 3 HOH A 109 470 109 HOH HOH . C 3 HOH A 110 471 110 HOH HOH . C 3 HOH A 111 472 111 HOH HOH . C 3 HOH A 112 473 112 HOH HOH . C 3 HOH A 113 474 113 HOH HOH . C 3 HOH A 114 475 114 HOH HOH . C 3 HOH A 115 476 115 HOH HOH . C 3 HOH A 116 477 116 HOH HOH . C 3 HOH A 117 478 117 HOH HOH . C 3 HOH A 118 479 118 HOH HOH . C 3 HOH A 119 480 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 P37 . . . B 2 6.492 28.126 27.722 1 13.92 ? N1 P37 361 A 1 HETATM 2 N N3 P37 . . . B 2 0.513 35.545 30.448 1 18.45 ? N3 P37 361 A 1 HETATM 3 C C4 P37 . . . B 2 6.906 27.662 25.264 1 13.63 ? C4 P37 361 A 1 HETATM 4 C C5 P37 . . . B 2 5.657 30.053 28.969 1 13.99 ? C5 P37 361 A 1 HETATM 5 C C6 P37 . . . B 2 -2.461 34.592 30.438 1 23.09 ? C6 P37 361 A 1 HETATM 6 C C7 P37 . . . B 2 -3.81 34.805 30.676 1 24.03 ? C7 P37 361 A 1 HETATM 7 C C8 P37 . . . B 2 -4.202 35.445 31.844 1 23.17 ? C8 P37 361 A 1 HETATM 8 C C10 P37 . . . B 2 -1.886 35.653 32.54 1 22.59 ? C10 P37 361 A 1 HETATM 9 C C13 P37 . . . B 2 1.663 33.742 30.753 1 18.31 ? C13 P37 361 A 1 HETATM 10 C C15 P37 . . . B 2 0.963 31.318 31.965 1 19.18 ? C15 P37 361 A 1 HETATM 11 C C17 P37 . . . B 2 2.596 32.702 30.822 1 18.48 ? C17 P37 361 A 1 HETATM 12 C C20 P37 . . . B 2 4.688 31.044 29.12 1 14.06 ? C20 P37 361 A 1 HETATM 13 C C21 P37 . . . B 2 6.711 29.979 29.888 1 14.85 ? C21 P37 361 A 1 HETATM 14 C C22 P37 . . . B 2 6.784 30.886 30.95 1 15.01 ? C22 P37 361 A 1 HETATM 15 C C24 P37 . . . B 2 5.891 32.86 32.268 1 14.46 ? C24 P37 361 A 1 HETATM 16 C C3 P37 . . . B 2 7.951 26.882 26.06 1 12.58 ? C3 P37 361 A 1 HETATM 17 C C2 P37 . . . B 2 6.559 27.117 26.652 1 14.03 ? C2 P37 361 A 1 HETATM 18 C C1 P37 . . . B 2 5.555 29.075 27.775 1 14.73 ? C1 P37 361 A 1 HETATM 19 O O1 P37 . . . B 2 4.663 29.207 26.934 1 14.07 ? O1 P37 361 A 1 HETATM 20 C C23 P37 . . . B 2 5.801 31.87 31.101 1 14.36 ? C23 P37 361 A 1 HETATM 21 C C19 P37 . . . B 2 4.751 31.951 30.182 1 15.36 ? C19 P37 361 A 1 HETATM 22 N N5 P37 . . . B 2 3.814 32.898 30.304 1 17.29 ? N5 P37 361 A 1 HETATM 23 C C16 P37 . . . B 2 2.243 31.492 31.433 1 18.68 ? C16 P37 361 A 1 HETATM 24 O O2 P37 . . . B 2 0.659 30.25 32.497 1 18.62 ? O2 P37 361 A 1 HETATM 25 N N4 P37 . . . B 2 0.018 32.364 31.892 1 18.45 ? N4 P37 361 A 1 HETATM 26 C C18 P37 . . . B 2 -1.337 32.142 32.47 1 18.28 ? C18 P37 361 A 1 HETATM 27 C C12 P37 . . . B 2 0.385 33.587 31.275 1 18.27 ? C12 P37 361 A 1 HETATM 28 C C14 P37 . . . B 2 1.703 34.974 30.245 1 18 ? C14 P37 361 A 1 HETATM 29 N N2 P37 . . . B 2 -0.224 34.755 31.049 1 20.01 ? N2 P37 361 A 1 HETATM 30 C C11 P37 . . . B 2 -1.496 35.011 31.36 1 20.86 ? C11 P37 361 A 1 HETATM 31 C C9 P37 . . . B 2 -3.247 35.867 32.775 1 23.67 ? C9 P37 361 A 1 HETATM 32 F F2 P37 . . . B 2 -5.519 35.64 32.053 1 24.51 ? F2 P37 361 A 1 HETATM 33 F F1 P37 . . . B 2 -2.093 33.966 29.301 1 25.87 ? F1 P37 361 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 33 #