data_3GFJ # _model_server_result.job_id aREFDuckT7kIMEP2pVEDXw _model_server_result.datetime_utc '2024-12-21 15:09:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gfj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":147}' # _entry.id 3GFJ # _exptl.entry_id 3GFJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GFJ _cell.length_a 45.862 _cell.length_b 45.862 _cell.length_c 138.17 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 143 A GLU 143 1_555 B CA CA . A CA 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc2 A OXT GLN 146 A GLN 146 1_555 B CA CA . A CA 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GFJ _atom_sites.fract_transf_matrix[1][1] 0.021805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 147 1 CA CA . C 3 HOH A 1 148 2 HOH HOH . C 3 HOH A 2 149 3 HOH HOH . C 3 HOH A 3 150 4 HOH HOH . C 3 HOH A 4 151 5 HOH HOH . C 3 HOH A 5 152 6 HOH HOH . C 3 HOH A 6 153 7 HOH HOH . C 3 HOH A 7 154 8 HOH HOH . C 3 HOH A 8 155 9 HOH HOH . C 3 HOH A 9 156 10 HOH HOH . C 3 HOH A 10 157 11 HOH HOH . C 3 HOH A 11 158 12 HOH HOH . C 3 HOH A 12 159 13 HOH HOH . C 3 HOH A 13 160 14 HOH HOH . C 3 HOH A 14 161 15 HOH HOH . C 3 HOH A 15 162 16 HOH HOH . C 3 HOH A 16 163 17 HOH HOH . C 3 HOH A 17 164 18 HOH HOH . C 3 HOH A 18 165 19 HOH HOH . C 3 HOH A 19 166 20 HOH HOH . C 3 HOH A 20 167 21 HOH HOH . C 3 HOH A 21 168 22 HOH HOH . C 3 HOH A 22 169 23 HOH HOH . C 3 HOH A 23 170 24 HOH HOH . C 3 HOH A 24 171 25 HOH HOH . C 3 HOH A 25 172 26 HOH HOH . C 3 HOH A 26 173 27 HOH HOH . C 3 HOH A 27 174 28 HOH HOH . C 3 HOH A 28 175 29 HOH HOH . C 3 HOH A 29 176 30 HOH HOH . C 3 HOH A 30 177 31 HOH HOH . C 3 HOH A 31 178 32 HOH HOH . C 3 HOH A 32 179 33 HOH HOH . C 3 HOH A 33 180 34 HOH HOH . C 3 HOH A 34 181 35 HOH HOH . C 3 HOH A 35 182 36 HOH HOH . C 3 HOH A 36 183 37 HOH HOH . C 3 HOH A 37 184 38 HOH HOH . C 3 HOH A 38 185 39 HOH HOH . C 3 HOH A 39 186 40 HOH HOH . C 3 HOH A 40 187 41 HOH HOH . C 3 HOH A 41 188 42 HOH HOH . C 3 HOH A 42 189 43 HOH HOH . C 3 HOH A 43 190 44 HOH HOH . C 3 HOH A 44 191 45 HOH HOH . C 3 HOH A 45 192 46 HOH HOH . C 3 HOH A 46 193 47 HOH HOH . C 3 HOH A 47 194 48 HOH HOH . C 3 HOH A 48 195 49 HOH HOH . C 3 HOH A 49 196 50 HOH HOH . C 3 HOH A 50 197 51 HOH HOH . C 3 HOH A 51 198 52 HOH HOH . C 3 HOH A 52 199 53 HOH HOH . C 3 HOH A 53 200 54 HOH HOH . C 3 HOH A 54 201 55 HOH HOH . C 3 HOH A 55 202 56 HOH HOH . C 3 HOH A 56 203 57 HOH HOH . C 3 HOH A 57 204 58 HOH HOH . C 3 HOH A 58 205 59 HOH HOH . C 3 HOH A 59 206 60 HOH HOH . C 3 HOH A 60 207 61 HOH HOH . C 3 HOH A 61 208 62 HOH HOH . C 3 HOH A 62 209 63 HOH HOH . C 3 HOH A 63 210 64 HOH HOH . C 3 HOH A 64 211 65 HOH HOH . C 3 HOH A 65 212 66 HOH HOH . C 3 HOH A 66 213 67 HOH HOH . C 3 HOH A 67 214 68 HOH HOH . C 3 HOH A 68 215 69 HOH HOH . C 3 HOH A 69 216 70 HOH HOH . C 3 HOH A 70 217 71 HOH HOH . C 3 HOH A 71 218 72 HOH HOH . C 3 HOH A 72 219 73 HOH HOH . C 3 HOH A 73 220 74 HOH HOH . C 3 HOH A 74 221 75 HOH HOH . C 3 HOH A 75 222 76 HOH HOH . C 3 HOH A 76 223 77 HOH HOH . C 3 HOH A 77 224 78 HOH HOH . C 3 HOH A 78 225 79 HOH HOH . C 3 HOH A 79 226 80 HOH HOH . C 3 HOH A 80 227 81 HOH HOH . C 3 HOH A 81 228 82 HOH HOH . C 3 HOH A 82 229 83 HOH HOH . C 3 HOH A 83 230 84 HOH HOH . C 3 HOH A 84 231 85 HOH HOH . C 3 HOH A 85 232 86 HOH HOH . C 3 HOH A 86 233 87 HOH HOH . C 3 HOH A 87 234 88 HOH HOH . C 3 HOH A 88 235 89 HOH HOH . C 3 HOH A 89 236 90 HOH HOH . C 3 HOH A 90 237 91 HOH HOH . C 3 HOH A 91 238 92 HOH HOH . C 3 HOH A 92 239 93 HOH HOH . C 3 HOH A 93 240 94 HOH HOH . C 3 HOH A 94 241 95 HOH HOH . C 3 HOH A 95 242 96 HOH HOH . C 3 HOH A 96 243 97 HOH HOH . C 3 HOH A 97 244 98 HOH HOH . C 3 HOH A 98 245 99 HOH HOH . C 3 HOH A 99 246 100 HOH HOH . C 3 HOH A 100 247 101 HOH HOH . C 3 HOH A 101 248 102 HOH HOH . C 3 HOH A 102 249 103 HOH HOH . C 3 HOH A 103 250 104 HOH HOH . C 3 HOH A 104 251 105 HOH HOH . C 3 HOH A 105 252 106 HOH HOH . C 3 HOH A 106 253 107 HOH HOH . C 3 HOH A 107 254 108 HOH HOH . C 3 HOH A 108 255 109 HOH HOH . C 3 HOH A 109 256 110 HOH HOH . C 3 HOH A 110 257 111 HOH HOH . C 3 HOH A 111 258 112 HOH HOH . C 3 HOH A 112 259 113 HOH HOH . C 3 HOH A 113 260 114 HOH HOH . C 3 HOH A 114 261 115 HOH HOH . C 3 HOH A 115 262 116 HOH HOH . C 3 HOH A 116 263 117 HOH HOH . C 3 HOH A 117 264 118 HOH HOH . C 3 HOH A 118 265 119 HOH HOH . C 3 HOH A 119 266 120 HOH HOH . C 3 HOH A 120 267 121 HOH HOH . C 3 HOH A 121 268 122 HOH HOH . C 3 HOH A 122 269 123 HOH HOH . C 3 HOH A 123 270 124 HOH HOH . C 3 HOH A 124 271 125 HOH HOH . C 3 HOH A 125 272 126 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -16.959 _atom_site.Cartn_y 11.874 _atom_site.Cartn_z -0.441 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 147 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 108 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #