data_3GFQ # _model_server_result.job_id sew6Nh1X6EfRjfC85TXfxw _model_server_result.datetime_utc '2024-10-14 08:27:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gfq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":200}' # _entry.id 3GFQ # _exptl.entry_id 3GFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GFQ _cell.length_a 47.543 _cell.length_b 66.238 _cell.length_c 220.748 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F 1 1 C,D,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 70 n n N1 C10 FMN doub 71 n n C2 O2 FMN doub 72 n n C2 N3 FMN sing 73 n n N3 C4 FMN sing 74 n n N3 HN3 FMN sing 75 n n C4 O4 FMN doub 76 n n C4 C4A FMN sing 77 n n C4A N5 FMN doub 78 n n C4A C10 FMN sing 79 n n N5 C5A FMN sing 80 n n C5A C6 FMN doub 81 n y C5A C9A FMN sing 82 n y C6 C7 FMN sing 83 n y C6 H6 FMN sing 84 n n C7 C7M FMN sing 85 n n C7 C8 FMN doub 86 n y C7M HM71 FMN sing 87 n n C7M HM72 FMN sing 88 n n C7M HM73 FMN sing 89 n n C8 C8M FMN sing 90 n n C8 C9 FMN sing 91 n y C8M HM81 FMN sing 92 n n C8M HM82 FMN sing 93 n n C8M HM83 FMN sing 94 n n C9 C9A FMN doub 95 n y C9 H9 FMN sing 96 n n C9A N10 FMN sing 97 n n N10 C10 FMN sing 98 n n N10 C1' FMN sing 99 n n C1' C2' FMN sing 100 n n C1' "H1'1" FMN sing 101 n n C1' "H1'2" FMN sing 102 n n C2' O2' FMN sing 103 n n C2' C3' FMN sing 104 n n C2' H2' FMN sing 105 n n O2' HO2' FMN sing 106 n n C3' O3' FMN sing 107 n n C3' C4' FMN sing 108 n n C3' H3' FMN sing 109 n n O3' HO3' FMN sing 110 n n C4' O4' FMN sing 111 n n C4' C5' FMN sing 112 n n C4' H4' FMN sing 113 n n O4' HO4' FMN sing 114 n n C5' O5' FMN sing 115 n n C5' "H5'1" FMN sing 116 n n C5' "H5'2" FMN sing 117 n n O5' P FMN sing 118 n n P O1P FMN doub 119 n n P O2P FMN sing 120 n n P O3P FMN sing 121 n n O2P HOP2 FMN sing 122 n n O3P HOP3 FMN sing 123 n n # _atom_sites.entry_id 3GFQ _atom_sites.fract_transf_matrix[1][1] 0.021034 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015097 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FMN A 1 200 200 FMN FMN . F 2 FMN B 1 200 200 FMN FMN . G 2 FMN C 1 200 200 FMN FMN . H 2 FMN D 1 200 200 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . G 2 -6.736 -39.112 49.486 1 54.65 ? N1 FMN 200 C 1 HETATM 2 C C2 FMN . . . G 2 -6.764 -37.826 48.99 1 54.65 ? C2 FMN 200 C 1 HETATM 3 O O2 FMN . . . G 2 -6.992 -36.884 49.747 1 54.65 ? O2 FMN 200 C 1 HETATM 4 N N3 FMN . . . G 2 -6.535 -37.595 47.646 1 54.65 ? N3 FMN 200 C 1 HETATM 5 C C4 FMN . . . G 2 -6.278 -38.65 46.789 1 54.65 ? C4 FMN 200 C 1 HETATM 6 O O4 FMN . . . G 2 -6.245 -38.456 45.574 1 54.65 ? O4 FMN 200 C 1 HETATM 7 C C4A FMN . . . G 2 -6.248 -39.948 47.287 1 54.65 ? C4A FMN 200 C 1 HETATM 8 N N5 FMN . . . G 2 -5.994 -41.012 46.445 1 54.65 ? N5 FMN 200 C 1 HETATM 9 C C5A FMN . . . G 2 -6.137 -42.303 46.912 1 54.65 ? C5A FMN 200 C 1 HETATM 10 C C6 FMN . . . G 2 -6.048 -43.379 46.036 1 54.65 ? C6 FMN 200 C 1 HETATM 11 C C7 FMN . . . G 2 -6.191 -44.677 46.513 1 54.65 ? C7 FMN 200 C 1 HETATM 12 C C7M FMN . . . G 2 -6.095 -45.84 45.57 1 54.65 ? C7M FMN 200 C 1 HETATM 13 C C8 FMN . . . G 2 -6.424 -44.899 47.866 1 54.65 ? C8 FMN 200 C 1 HETATM 14 C C8M FMN . . . G 2 -6.58 -46.299 48.384 1 54.65 ? C8M FMN 200 C 1 HETATM 15 C C9 FMN . . . G 2 -6.515 -43.824 48.742 1 54.65 ? C9 FMN 200 C 1 HETATM 16 C C9A FMN . . . G 2 -6.371 -42.527 48.265 1 54.65 ? C9A FMN 200 C 1 HETATM 17 N N10 FMN . . . G 2 -6.458 -41.459 49.135 1 54.65 ? N10 FMN 200 C 1 HETATM 18 C C10 FMN . . . G 2 -6.479 -40.172 48.64 1 54.65 ? C10 FMN 200 C 1 HETATM 19 C C1' FMN . . . G 2 -6.532 -41.698 50.613 1 54.65 ? C1' FMN 200 C 1 HETATM 20 C C2' FMN . . . G 2 -7.986 -41.643 51.064 1 54.65 ? C2' FMN 200 C 1 HETATM 21 O O2' FMN . . . G 2 -8.411 -40.302 51.146 1 54.65 ? O2' FMN 200 C 1 HETATM 22 C C3' FMN . . . G 2 -8.14 -42.277 52.434 1 54.65 ? C3' FMN 200 C 1 HETATM 23 O O3' FMN . . . G 2 -7.79 -43.639 52.358 1 54.65 ? O3' FMN 200 C 1 HETATM 24 C C4' FMN . . . G 2 -9.57 -42.147 52.932 1 54.65 ? C4' FMN 200 C 1 HETATM 25 O O4' FMN . . . G 2 -9.667 -42.819 54.166 1 54.65 ? O4' FMN 200 C 1 HETATM 26 C C5' FMN . . . G 2 -10.544 -42.795 51.961 1 54.65 ? C5' FMN 200 C 1 HETATM 27 O O5' FMN . . . G 2 -10.311 -44.181 52.012 1 54.65 ? O5' FMN 200 C 1 HETATM 28 P P FMN . . . G 2 -11.519 -45.215 52.231 1 54.65 ? P FMN 200 C 1 HETATM 29 O O1P FMN . . . G 2 -11.399 -46.322 51.217 1 54.65 ? O1P FMN 200 C 1 HETATM 30 O O2P FMN . . . G 2 -11.398 -45.781 53.621 1 54.65 ? O2P FMN 200 C 1 HETATM 31 O O3P FMN . . . G 2 -12.842 -44.51 52.069 1 54.65 ? O3P FMN 200 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 570 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #