data_3GG0 # _model_server_result.job_id X9rJ7j4Pf6N92lGxfkYA8A _model_server_result.datetime_utc '2025-01-02 18:43:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gg0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 3GG0 # _exptl.entry_id 3GG0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GG0 _cell.length_a 69.02 _cell.length_b 96.89 _cell.length_c 126.87 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GG0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 196 A GLU 188 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc2 A OD1 ASN 247 A ASN 239 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc3 A OE2 GLU 280 A GLU 272 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc4 A OD2 ASP 310 A ASP 302 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc5 A OD1 ASP 310 A ASP 302 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc6 A OD1 ASP 311 A ASP 303 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc7 A OE1 GLU 367 A GLU 359 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc8 A OE2 GLU 367 A GLU 359 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc9 K O HOH . A HOH 409 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc10 K O HOH . A HOH 409 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc11 C O2P C2E . A C2E 501 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc12 C O1P C2E . A C2E 501 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc13 B OE2 GLU 196 B GLU 188 1_555 H MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc14 B OD1 ASN 247 B ASN 239 1_555 H MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc15 B OE2 GLU 280 B GLU 272 1_555 H MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc16 B OD1 ASP 310 B ASP 302 1_555 H MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc17 B OD2 ASP 310 B ASP 302 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc18 B OD1 ASP 311 B ASP 303 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc19 B OE1 GLU 367 B GLU 359 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc20 B OE2 GLU 367 B GLU 359 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc21 L O HOH . B HOH 407 1_555 H MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc22 L O HOH . B HOH 407 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc23 G O2P C2E . B C2E 501 1_555 H MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc24 G O1P C2E . B C2E 501 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GG0 _atom_sites.fract_transf_matrix[1][1] 0.014489 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 C2E A 1 501 501 C2E CG2 . D 3 MN A 1 502 502 MN MN3 . E 3 MN A 1 503 503 MN MN3 . F 4 FMN A 1 504 504 FMN FMN . G 2 C2E B 1 501 501 C2E CG2 . H 3 MN B 1 502 502 MN MN3 . I 3 MN B 1 503 503 MN MN3 . J 4 FMN B 1 504 504 FMN FMN . K 5 HOH A 1 406 4 HOH HOH . K 5 HOH A 2 407 5 HOH HOH . K 5 HOH A 3 408 6 HOH HOH . K 5 HOH A 4 409 8 HOH HOH . K 5 HOH A 5 410 9 HOH HOH . K 5 HOH A 6 411 2 HOH HOH . K 5 HOH A 7 412 7 HOH HOH . K 5 HOH A 8 413 9 HOH HOH . K 5 HOH A 9 414 10 HOH HOH . K 5 HOH A 10 415 12 HOH HOH . K 5 HOH A 11 416 13 HOH HOH . K 5 HOH A 12 417 15 HOH HOH . K 5 HOH A 13 418 17 HOH HOH . K 5 HOH A 14 419 18 HOH HOH . K 5 HOH A 15 420 19 HOH HOH . K 5 HOH A 16 421 24 HOH HOH . K 5 HOH A 17 422 27 HOH HOH . K 5 HOH A 18 423 29 HOH HOH . K 5 HOH A 19 424 31 HOH HOH . K 5 HOH A 20 425 33 HOH HOH . K 5 HOH A 21 426 38 HOH HOH . K 5 HOH A 22 427 40 HOH HOH . K 5 HOH A 23 428 41 HOH HOH . K 5 HOH A 24 429 42 HOH HOH . K 5 HOH A 25 430 44 HOH HOH . K 5 HOH A 26 431 45 HOH HOH . K 5 HOH A 27 432 46 HOH HOH . K 5 HOH A 28 433 48 HOH HOH . K 5 HOH A 29 434 49 HOH HOH . K 5 HOH A 30 435 54 HOH HOH . K 5 HOH A 31 436 57 HOH HOH . K 5 HOH A 32 437 58 HOH HOH . K 5 HOH A 33 438 63 HOH HOH . K 5 HOH A 34 439 64 HOH HOH . K 5 HOH A 35 440 66 HOH HOH . K 5 HOH A 36 441 67 HOH HOH . K 5 HOH A 37 442 68 HOH HOH . K 5 HOH A 38 443 69 HOH HOH . K 5 HOH A 39 444 70 HOH HOH . K 5 HOH A 40 445 71 HOH HOH . K 5 HOH A 41 446 72 HOH HOH . K 5 HOH A 42 447 74 HOH HOH . K 5 HOH A 43 448 76 HOH HOH . K 5 HOH A 44 449 77 HOH HOH . K 5 HOH A 45 450 78 HOH HOH . K 5 HOH A 46 451 79 HOH HOH . K 5 HOH A 47 452 80 HOH HOH . K 5 HOH A 48 453 84 HOH HOH . K 5 HOH A 49 454 86 HOH HOH . K 5 HOH A 50 455 88 HOH HOH . K 5 HOH A 51 456 96 HOH HOH . K 5 HOH A 52 457 98 HOH HOH . K 5 HOH A 53 458 99 HOH HOH . K 5 HOH A 54 459 100 HOH HOH . K 5 HOH A 55 460 101 HOH HOH . K 5 HOH A 56 461 104 HOH HOH . K 5 HOH A 57 462 105 HOH HOH . K 5 HOH A 58 463 109 HOH HOH . K 5 HOH A 59 464 110 HOH HOH . K 5 HOH A 60 465 118 HOH HOH . K 5 HOH A 61 466 119 HOH HOH . K 5 HOH A 62 467 124 HOH HOH . K 5 HOH A 63 468 125 HOH HOH . K 5 HOH A 64 469 126 HOH HOH . K 5 HOH A 65 470 130 HOH HOH . K 5 HOH A 66 471 134 HOH HOH . K 5 HOH A 67 472 135 HOH HOH . K 5 HOH A 68 473 138 HOH HOH . K 5 HOH A 69 474 139 HOH HOH . K 5 HOH A 70 475 141 HOH HOH . K 5 HOH A 71 476 142 HOH HOH . K 5 HOH A 72 477 145 HOH HOH . K 5 HOH A 73 478 146 HOH HOH . L 5 HOH B 1 406 3 HOH HOH . L 5 HOH B 2 407 7 HOH HOH . L 5 HOH B 3 408 5 HOH HOH . L 5 HOH B 4 409 6 HOH HOH . L 5 HOH B 5 410 8 HOH HOH . L 5 HOH B 6 411 11 HOH HOH . L 5 HOH B 7 412 16 HOH HOH . L 5 HOH B 8 413 20 HOH HOH . L 5 HOH B 9 414 22 HOH HOH . L 5 HOH B 10 415 23 HOH HOH . L 5 HOH B 11 416 25 HOH HOH . L 5 HOH B 12 417 26 HOH HOH . L 5 HOH B 13 418 28 HOH HOH . L 5 HOH B 14 419 30 HOH HOH . L 5 HOH B 15 420 34 HOH HOH . L 5 HOH B 16 421 35 HOH HOH . L 5 HOH B 17 422 36 HOH HOH . L 5 HOH B 18 423 39 HOH HOH . L 5 HOH B 19 424 43 HOH HOH . L 5 HOH B 20 425 51 HOH HOH . L 5 HOH B 21 426 52 HOH HOH . L 5 HOH B 22 427 53 HOH HOH . L 5 HOH B 23 428 56 HOH HOH . L 5 HOH B 24 429 59 HOH HOH . L 5 HOH B 25 430 60 HOH HOH . L 5 HOH B 26 431 61 HOH HOH . L 5 HOH B 27 432 62 HOH HOH . L 5 HOH B 28 433 65 HOH HOH . L 5 HOH B 29 434 73 HOH HOH . L 5 HOH B 30 435 75 HOH HOH . L 5 HOH B 31 436 81 HOH HOH . L 5 HOH B 32 437 83 HOH HOH . L 5 HOH B 33 438 87 HOH HOH . L 5 HOH B 34 439 90 HOH HOH . L 5 HOH B 35 440 92 HOH HOH . L 5 HOH B 36 441 93 HOH HOH . L 5 HOH B 37 442 94 HOH HOH . L 5 HOH B 38 443 97 HOH HOH . L 5 HOH B 39 444 102 HOH HOH . L 5 HOH B 40 445 106 HOH HOH . L 5 HOH B 41 446 107 HOH HOH . L 5 HOH B 42 447 108 HOH HOH . L 5 HOH B 43 448 111 HOH HOH . L 5 HOH B 44 449 112 HOH HOH . L 5 HOH B 45 450 114 HOH HOH . L 5 HOH B 46 451 115 HOH HOH . L 5 HOH B 47 452 116 HOH HOH . L 5 HOH B 48 453 121 HOH HOH . L 5 HOH B 49 454 122 HOH HOH . L 5 HOH B 50 455 123 HOH HOH . L 5 HOH B 51 456 128 HOH HOH . L 5 HOH B 52 457 129 HOH HOH . L 5 HOH B 53 458 131 HOH HOH . L 5 HOH B 54 459 133 HOH HOH . L 5 HOH B 55 460 136 HOH HOH . L 5 HOH B 56 461 137 HOH HOH . L 5 HOH B 57 462 143 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.116 _atom_site.Cartn_y -1.541 _atom_site.Cartn_z -2.869 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #