data_3GG5 # _model_server_result.job_id ihTVVPa8zDLH_VzOREGu7Q _model_server_result.datetime_utc '2024-11-23 03:56:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":616}' # _entry.id 3GG5 # _exptl.entry_id 3GG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 122.43 _cell.angle_gamma 90 _cell.entry_id 3GG5 _cell.length_a 157.562 _cell.length_b 94.864 _cell.length_c 130.864 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3GG5 _atom_sites.fract_transf_matrix[1][1] 0.006347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004032 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 616 616 SO4 SO4 . F 3 PO4 B 1 616 616 PO4 PO4 . G 2 SO4 C 1 616 616 SO4 SO4 . H 3 PO4 D 1 616 616 PO4 PO4 . I 4 HOH A 1 314 3 HOH HOH . I 4 HOH A 2 315 5 HOH HOH . I 4 HOH A 3 316 14 HOH HOH . I 4 HOH A 4 317 28 HOH HOH . I 4 HOH A 5 318 35 HOH HOH . I 4 HOH A 6 319 37 HOH HOH . J 4 HOH B 1 314 4 HOH HOH . J 4 HOH B 2 315 6 HOH HOH . J 4 HOH B 3 316 12 HOH HOH . J 4 HOH B 4 317 17 HOH HOH . J 4 HOH B 5 318 21 HOH HOH . J 4 HOH B 6 319 25 HOH HOH . J 4 HOH B 7 320 27 HOH HOH . K 4 HOH C 1 314 2 HOH HOH . K 4 HOH C 2 315 13 HOH HOH . K 4 HOH C 3 316 19 HOH HOH . K 4 HOH C 4 317 29 HOH HOH . K 4 HOH C 5 318 38 HOH HOH . L 4 HOH D 1 314 7 HOH HOH . L 4 HOH D 2 315 8 HOH HOH . L 4 HOH D 3 316 16 HOH HOH . L 4 HOH D 4 317 18 HOH HOH . L 4 HOH D 5 318 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 3 59.935 6.951 29.135 1 63.69 ? P PO4 616 D 1 HETATM 2 O O1 PO4 . . . H 3 61.12 6.462 29.914 1 63.12 ? O1 PO4 616 D 1 HETATM 3 O O2 PO4 . . . H 3 60.039 6.626 27.63 1 58.32 ? O2 PO4 616 D 1 HETATM 4 O O3 PO4 . . . H 3 60.211 8.467 29.368 1 61.79 ? O3 PO4 616 D 1 HETATM 5 O O4 PO4 . . . H 3 58.673 6.326 29.813 1 58.95 ? O4 PO4 616 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #