data_3GGF
#
_model_server_result.job_id            iu3vphmXbg1fncaOpWar1Q 
_model_server_result.datetime_utc      '2024-11-28 11:53:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ggf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    3GGF 
#
_exptl.entry_id    3GGF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3GGF 
_cell.length_a            65.92 
_cell.length_b            91.25 
_cell.length_c            108.97 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GGF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,L 1 1 
B,H,I,J,K,M 2 1 
A,B,C,D,E,F,G,H,I,J,K,L,M 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 78 A CYS 77 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc2 A OD2 ASP 110 A ASP 109 1_555 F CD CD . A CD 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc3 A ND1 HIS 137 A HIS 136 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc4 A OE1 GLU 139 A GLU 138 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc5 A OE2 GLU 139 A GLU 138 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc6 A NE2 HIS 143 A HIS 142 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc7 A O VAL 166 A VAL 165 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc8 A O SER 301 A SER 300 1_555 E CD CD . A CD 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc9 A OG SER 301 A SER 300 1_555 E CD CD . A CD 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc10 C CD CD . A CD 301 1_555 L O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc11 E CD CD . A CD 303 1_555 L O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc12 F CD CD . A CD 304 1_555 G N3 GVD . A GVD 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc13 F CD CD . A CD 304 1_555 L O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
metalc ? metalc14 F CD CD . A CD 304 1_555 L O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc15 B OE2 GLU 71 B GLU 70 1_555 H CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? 
metalc ? metalc16 B SG CYS 78 B CYS 77 1_555 I CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? 
metalc ? metalc17 B OD2 ASP 110 B ASP 109 1_555 J CD CD . B CD 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc18 B ND1 HIS 137 B HIS 136 1_555 I CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc19 B OE1 GLU 139 B GLU 138 1_555 I CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc20 B OE2 GLU 139 B GLU 138 1_555 I CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc21 B NE2 HIS 143 B HIS 142 1_555 H CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc22 B O VAL 166 B VAL 165 1_555 H CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc23 H CD CD . B CD 301 1_555 M O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc24 J CD CD . B CD 303 1_555 K NAQ GVD . B GVD 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3GGF 
_atom_sites.fract_transf_matrix[1][1]    0.01517 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010959 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009177 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CD A 1 301 1 CD CD1 . 
D 2 CD A 1 302 3 CD CD . 
E 2 CD A 1 303 5 CD CD1 . 
F 2 CD A 1 304 6 CD CD . 
G 3 GVD A 1 305 8 GVD GVD . 
H 2 CD B 1 301 2 CD CD1 . 
I 2 CD B 1 302 4 CD CD . 
J 2 CD B 1 303 7 CD CD . 
K 3 GVD B 1 304 9 GVD GVD . 
L 4 HOH A 1 306 1 HOH CD1 . 
L 4 HOH A 2 307 5 HOH CD1 . 
L 4 HOH A 3 308 2 HOH HOH . 
L 4 HOH A 4 309 6 HOH HOH . 
L 4 HOH A 5 310 7 HOH HOH . 
L 4 HOH A 6 311 8 HOH HOH . 
L 4 HOH A 7 312 9 HOH HOH . 
L 4 HOH A 8 313 12 HOH HOH . 
L 4 HOH A 9 314 13 HOH HOH . 
L 4 HOH A 10 315 14 HOH HOH . 
L 4 HOH A 11 316 15 HOH HOH . 
L 4 HOH A 12 317 17 HOH HOH . 
L 4 HOH A 13 318 19 HOH HOH . 
L 4 HOH A 14 319 20 HOH HOH . 
L 4 HOH A 15 320 21 HOH HOH . 
L 4 HOH A 16 321 22 HOH HOH . 
L 4 HOH A 17 322 23 HOH HOH . 
L 4 HOH A 18 323 27 HOH HOH . 
L 4 HOH A 19 324 28 HOH HOH . 
L 4 HOH A 20 325 31 HOH HOH . 
L 4 HOH A 21 326 33 HOH HOH . 
L 4 HOH A 22 327 34 HOH HOH . 
L 4 HOH A 23 328 36 HOH HOH . 
L 4 HOH A 24 329 37 HOH HOH . 
L 4 HOH A 25 330 38 HOH HOH . 
L 4 HOH A 26 331 40 HOH HOH . 
L 4 HOH A 27 332 41 HOH HOH . 
L 4 HOH A 28 333 48 HOH HOH . 
L 4 HOH A 29 334 49 HOH HOH . 
L 4 HOH A 30 335 50 HOH HOH . 
L 4 HOH A 31 336 55 HOH HOH . 
L 4 HOH A 32 337 59 HOH HOH . 
L 4 HOH A 33 338 61 HOH HOH . 
L 4 HOH A 34 339 62 HOH HOH . 
L 4 HOH A 35 340 66 HOH HOH . 
L 4 HOH A 36 341 69 HOH HOH . 
L 4 HOH A 37 342 70 HOH HOH . 
L 4 HOH A 38 343 74 HOH HOH . 
L 4 HOH A 39 344 75 HOH HOH . 
L 4 HOH A 40 345 77 HOH HOH . 
L 4 HOH A 41 346 78 HOH HOH . 
L 4 HOH A 42 347 80 HOH HOH . 
L 4 HOH A 43 348 86 HOH HOH . 
L 4 HOH A 44 349 87 HOH HOH . 
L 4 HOH A 45 350 88 HOH HOH . 
L 4 HOH A 46 351 89 HOH HOH . 
L 4 HOH A 47 352 90 HOH HOH . 
L 4 HOH A 48 353 96 HOH HOH . 
L 4 HOH A 49 354 97 HOH HOH . 
L 4 HOH A 50 355 98 HOH HOH . 
L 4 HOH A 51 356 99 HOH HOH . 
L 4 HOH A 52 357 100 HOH HOH . 
L 4 HOH A 53 358 101 HOH HOH . 
L 4 HOH A 54 359 103 HOH HOH . 
L 4 HOH A 55 360 104 HOH HOH . 
L 4 HOH A 56 361 106 HOH HOH . 
L 4 HOH A 57 362 107 HOH HOH . 
L 4 HOH A 58 363 108 HOH HOH . 
L 4 HOH A 59 364 110 HOH HOH . 
L 4 HOH A 60 365 111 HOH HOH . 
L 4 HOH A 61 366 112 HOH HOH . 
L 4 HOH A 62 367 113 HOH HOH . 
L 4 HOH A 63 368 117 HOH HOH . 
L 4 HOH A 64 369 118 HOH HOH . 
L 4 HOH A 65 370 119 HOH HOH . 
L 4 HOH A 66 371 120 HOH HOH . 
L 4 HOH A 67 372 122 HOH HOH . 
L 4 HOH A 68 373 124 HOH HOH . 
L 4 HOH A 69 374 126 HOH HOH . 
L 4 HOH A 70 375 127 HOH HOH . 
L 4 HOH A 71 376 128 HOH HOH . 
L 4 HOH A 72 377 129 HOH HOH . 
L 4 HOH A 73 378 130 HOH HOH . 
L 4 HOH A 74 379 131 HOH HOH . 
L 4 HOH A 75 380 133 HOH HOH . 
L 4 HOH A 76 381 134 HOH HOH . 
L 4 HOH A 77 382 137 HOH HOH . 
L 4 HOH A 78 383 140 HOH HOH . 
L 4 HOH A 79 384 141 HOH HOH . 
M 4 HOH B 1 305 2 HOH CD1 . 
M 4 HOH B 2 306 1 HOH HOH . 
M 4 HOH B 3 307 3 HOH HOH . 
M 4 HOH B 4 308 4 HOH HOH . 
M 4 HOH B 5 309 5 HOH HOH . 
M 4 HOH B 6 310 10 HOH HOH . 
M 4 HOH B 7 311 11 HOH HOH . 
M 4 HOH B 8 312 16 HOH HOH . 
M 4 HOH B 9 313 18 HOH HOH . 
M 4 HOH B 10 314 24 HOH HOH . 
M 4 HOH B 11 315 25 HOH HOH . 
M 4 HOH B 12 316 26 HOH HOH . 
M 4 HOH B 13 317 29 HOH HOH . 
M 4 HOH B 14 318 30 HOH HOH . 
M 4 HOH B 15 319 32 HOH HOH . 
M 4 HOH B 16 320 35 HOH HOH . 
M 4 HOH B 17 321 39 HOH HOH . 
M 4 HOH B 18 322 42 HOH HOH . 
M 4 HOH B 19 323 43 HOH HOH . 
M 4 HOH B 20 324 44 HOH HOH . 
M 4 HOH B 21 325 45 HOH HOH . 
M 4 HOH B 22 326 46 HOH HOH . 
M 4 HOH B 23 327 47 HOH HOH . 
M 4 HOH B 24 328 51 HOH HOH . 
M 4 HOH B 25 329 52 HOH HOH . 
M 4 HOH B 26 330 53 HOH HOH . 
M 4 HOH B 27 331 54 HOH HOH . 
M 4 HOH B 28 332 56 HOH HOH . 
M 4 HOH B 29 333 57 HOH HOH . 
M 4 HOH B 30 334 58 HOH HOH . 
M 4 HOH B 31 335 60 HOH HOH . 
M 4 HOH B 32 336 63 HOH HOH . 
M 4 HOH B 33 337 64 HOH HOH . 
M 4 HOH B 34 338 65 HOH HOH . 
M 4 HOH B 35 339 67 HOH HOH . 
M 4 HOH B 36 340 68 HOH HOH . 
M 4 HOH B 37 341 71 HOH HOH . 
M 4 HOH B 38 342 72 HOH HOH . 
M 4 HOH B 39 343 73 HOH HOH . 
M 4 HOH B 40 344 76 HOH HOH . 
M 4 HOH B 41 345 79 HOH HOH . 
M 4 HOH B 42 346 81 HOH HOH . 
M 4 HOH B 43 347 82 HOH HOH . 
M 4 HOH B 44 348 83 HOH HOH . 
M 4 HOH B 45 349 84 HOH HOH . 
M 4 HOH B 46 350 85 HOH HOH . 
M 4 HOH B 47 351 91 HOH HOH . 
M 4 HOH B 48 352 92 HOH HOH . 
M 4 HOH B 49 353 93 HOH HOH . 
M 4 HOH B 50 354 94 HOH HOH . 
M 4 HOH B 51 355 95 HOH HOH . 
M 4 HOH B 52 356 102 HOH HOH . 
M 4 HOH B 53 357 105 HOH HOH . 
M 4 HOH B 54 358 109 HOH HOH . 
M 4 HOH B 55 359 114 HOH HOH . 
M 4 HOH B 56 360 115 HOH HOH . 
M 4 HOH B 57 361 116 HOH HOH . 
M 4 HOH B 58 362 121 HOH HOH . 
M 4 HOH B 59 363 123 HOH HOH . 
M 4 HOH B 60 364 125 HOH HOH . 
M 4 HOH B 61 365 132 HOH HOH . 
M 4 HOH B 62 366 135 HOH HOH . 
M 4 HOH B 63 367 136 HOH HOH . 
M 4 HOH B 64 368 138 HOH HOH . 
M 4 HOH B 65 369 139 HOH HOH . 
M 4 HOH B 66 370 142 HOH HOH . 
M 4 HOH B 67 371 143 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               102.272 
_atom_site.Cartn_y               -10.981 
_atom_site.Cartn_z               100.574 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.26 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           302 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#