data_3GHP # _model_server_result.job_id jOxT-AsqLCWr-CNkMyeWkg _model_server_result.datetime_utc '2025-01-10 12:44:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ghp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":228}' # _entry.id 3GHP # _exptl.entry_id 3GHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GHP _cell.length_a 68.759 _cell.length_b 159.221 _cell.length_c 44.213 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,Q 1 1 B,I,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3GHP _atom_sites.fract_transf_matrix[1][1] 0.014544 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006281 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022618 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 228 2 EDO EDO . D 2 EDO A 1 229 3 EDO EDO . E 2 EDO A 1 230 1 EDO EDO . F 2 EDO A 1 231 1 EDO EDO . G 2 EDO A 1 232 1 EDO EDO . H 2 EDO A 1 233 1 EDO EDO . I 2 EDO B 1 228 4 EDO EDO . J 2 EDO B 1 229 5 EDO EDO . K 2 EDO B 1 230 6 EDO EDO . L 2 EDO B 1 231 1 EDO EDO . M 2 EDO B 1 232 1 EDO EDO . N 2 EDO B 1 233 1 EDO EDO . O 2 EDO B 1 234 1 EDO EDO . P 2 EDO B 1 235 1 EDO EDO . Q 3 HOH A 1 234 1 HOH HOH . Q 3 HOH A 2 235 3 HOH HOH . Q 3 HOH A 3 236 4 HOH HOH . Q 3 HOH A 4 237 5 HOH HOH . Q 3 HOH A 5 238 6 HOH HOH . Q 3 HOH A 6 239 7 HOH HOH . Q 3 HOH A 7 240 9 HOH HOH . Q 3 HOH A 8 241 14 HOH HOH . Q 3 HOH A 9 242 15 HOH HOH . Q 3 HOH A 10 243 17 HOH HOH . Q 3 HOH A 11 244 18 HOH HOH . Q 3 HOH A 12 245 20 HOH HOH . Q 3 HOH A 13 246 21 HOH HOH . Q 3 HOH A 14 247 24 HOH HOH . Q 3 HOH A 15 248 26 HOH HOH . Q 3 HOH A 16 249 29 HOH HOH . Q 3 HOH A 17 250 32 HOH HOH . Q 3 HOH A 18 251 33 HOH HOH . Q 3 HOH A 19 252 37 HOH HOH . Q 3 HOH A 20 253 39 HOH HOH . Q 3 HOH A 21 254 41 HOH HOH . Q 3 HOH A 22 255 42 HOH HOH . Q 3 HOH A 23 256 43 HOH HOH . Q 3 HOH A 24 257 44 HOH HOH . Q 3 HOH A 25 258 45 HOH HOH . Q 3 HOH A 26 259 47 HOH HOH . Q 3 HOH A 27 260 48 HOH HOH . Q 3 HOH A 28 261 49 HOH HOH . Q 3 HOH A 29 262 51 HOH HOH . Q 3 HOH A 30 263 52 HOH HOH . Q 3 HOH A 31 264 55 HOH HOH . Q 3 HOH A 32 265 57 HOH HOH . Q 3 HOH A 33 266 59 HOH HOH . Q 3 HOH A 34 267 60 HOH HOH . Q 3 HOH A 35 268 61 HOH HOH . Q 3 HOH A 36 269 62 HOH HOH . Q 3 HOH A 37 270 63 HOH HOH . Q 3 HOH A 38 271 64 HOH HOH . Q 3 HOH A 39 272 65 HOH HOH . Q 3 HOH A 40 273 68 HOH HOH . Q 3 HOH A 41 274 69 HOH HOH . Q 3 HOH A 42 275 70 HOH HOH . Q 3 HOH A 43 276 73 HOH HOH . R 3 HOH B 1 236 2 HOH HOH . R 3 HOH B 2 237 8 HOH HOH . R 3 HOH B 3 238 10 HOH HOH . R 3 HOH B 4 239 11 HOH HOH . R 3 HOH B 5 240 12 HOH HOH . R 3 HOH B 6 241 13 HOH HOH . R 3 HOH B 7 242 16 HOH HOH . R 3 HOH B 8 243 19 HOH HOH . R 3 HOH B 9 244 22 HOH HOH . R 3 HOH B 10 245 23 HOH HOH . R 3 HOH B 11 246 25 HOH HOH . R 3 HOH B 12 247 27 HOH HOH . R 3 HOH B 13 248 28 HOH HOH . R 3 HOH B 14 249 30 HOH HOH . R 3 HOH B 15 250 31 HOH HOH . R 3 HOH B 16 251 34 HOH HOH . R 3 HOH B 17 252 35 HOH HOH . R 3 HOH B 18 253 36 HOH HOH . R 3 HOH B 19 254 38 HOH HOH . R 3 HOH B 20 255 40 HOH HOH . R 3 HOH B 21 256 46 HOH HOH . R 3 HOH B 22 257 50 HOH HOH . R 3 HOH B 23 258 53 HOH HOH . R 3 HOH B 24 259 54 HOH HOH . R 3 HOH B 25 260 56 HOH HOH . R 3 HOH B 26 261 58 HOH HOH . R 3 HOH B 27 262 66 HOH HOH . R 3 HOH B 28 263 67 HOH HOH . R 3 HOH B 29 264 71 HOH HOH . R 3 HOH B 30 265 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 0.069 -22.38 -4.121 1 70.53 ? C1 EDO 228 A 1 HETATM 2 O O1 EDO . . . C 2 -0.276 -21.218 -3.341 1 69.25 ? O1 EDO 228 A 1 HETATM 3 C C2 EDO . . . C 2 -0.142 -22.114 -5.616 1 77.81 ? C2 EDO 228 A 1 HETATM 4 O O2 EDO . . . C 2 -0.526 -23.315 -6.313 1 77.63 ? O2 EDO 228 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #