data_3GJ8 # _model_server_result.job_id YWWp2qgsj_Hb421n6ApL9Q _model_server_result.datetime_utc '2024-11-21 16:29:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gj8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 3GJ8 # _exptl.entry_id 3GJ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.31 _cell.angle_gamma 90 _cell.entry_id 3GJ8 _cell.length_a 74.257 _cell.length_b 61.713 _cell.length_c 70.635 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GJ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 29 A THR 24 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc2 E MG MG . A MG 301 1_555 F O1B GDP . A GDP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc3 E MG MG . A MG 301 1_555 M O HOH . A HOH 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc4 E MG MG . A MG 301 1_555 M O HOH . A HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc5 E MG MG . A MG 301 1_555 M O HOH . A HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc6 E MG MG . A MG 301 1_555 M O HOH . A HOH 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc7 H ZN ZN . B ZN 300 1_555 B SG CYS 68 B CYS 852 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc8 H ZN ZN . B ZN 300 1_555 B SG CYS 71 B CYS 855 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc9 H ZN ZN . B ZN 300 1_555 B SG CYS 82 B CYS 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc10 H ZN ZN . B ZN 300 1_555 B SG CYS 85 B CYS 869 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc11 C OG1 THR 29 C THR 24 1_555 J MG MG . C MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc12 J MG MG . C MG 301 1_555 K O1B GDP . C GDP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc13 J MG MG . C MG 301 1_555 O O HOH . C HOH 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc14 J MG MG . C MG 301 1_555 O O HOH . C HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc15 J MG MG . C MG 301 1_555 O O HOH . C HOH 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc16 J MG MG . C MG 301 1_555 O O HOH . C HOH 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc17 L ZN ZN . D ZN 300 1_555 D SG CYS 68 D CYS 852 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc18 L ZN ZN . D ZN 300 1_555 D SG CYS 71 D CYS 855 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc19 L ZN ZN . D ZN 300 1_555 D SG CYS 82 D CYS 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc20 L ZN ZN . D ZN 300 1_555 D SG CYS 85 D CYS 869 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 3GJ8 _atom_sites.fract_transf_matrix[1][1] 0.013467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005526 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG A 1 301 301 MG MG . F 4 GDP A 1 302 302 GDP GDP . G 3 MG A 1 303 303 MG MG . H 5 ZN B 1 300 300 ZN ZN . I 3 MG C 1 303 303 MG MG . J 3 MG C 1 301 301 MG MG . K 4 GDP C 1 302 302 GDP GDP . L 5 ZN D 1 300 300 ZN ZN . M 6 HOH A 1 217 217 HOH HOH . M 6 HOH A 2 218 218 HOH HOH . M 6 HOH A 3 219 219 HOH HOH . M 6 HOH A 4 220 220 HOH HOH . M 6 HOH A 5 221 221 HOH HOH . M 6 HOH A 6 222 222 HOH HOH . M 6 HOH A 7 223 223 HOH HOH . M 6 HOH A 8 224 224 HOH HOH . M 6 HOH A 9 225 225 HOH HOH . M 6 HOH A 10 226 226 HOH HOH . M 6 HOH A 11 227 227 HOH HOH . M 6 HOH A 12 228 228 HOH HOH . M 6 HOH A 13 229 229 HOH HOH . M 6 HOH A 14 230 230 HOH HOH . M 6 HOH A 15 231 231 HOH HOH . M 6 HOH A 16 232 232 HOH HOH . M 6 HOH A 17 233 233 HOH HOH . M 6 HOH A 18 234 234 HOH HOH . M 6 HOH A 19 235 235 HOH HOH . M 6 HOH A 20 236 236 HOH HOH . M 6 HOH A 21 237 237 HOH HOH . M 6 HOH A 22 238 238 HOH HOH . M 6 HOH A 23 239 239 HOH HOH . M 6 HOH A 24 240 240 HOH HOH . M 6 HOH A 25 241 241 HOH HOH . M 6 HOH A 26 242 242 HOH HOH . M 6 HOH A 27 243 243 HOH HOH . M 6 HOH A 28 244 244 HOH HOH . M 6 HOH A 29 245 245 HOH HOH . M 6 HOH A 30 246 246 HOH HOH . M 6 HOH A 31 247 247 HOH HOH . M 6 HOH A 32 248 248 HOH HOH . M 6 HOH A 33 249 249 HOH HOH . M 6 HOH A 34 250 250 HOH HOH . M 6 HOH A 35 251 251 HOH HOH . M 6 HOH A 36 252 252 HOH HOH . M 6 HOH A 37 253 253 HOH HOH . M 6 HOH A 38 254 254 HOH HOH . M 6 HOH A 39 255 255 HOH HOH . M 6 HOH A 40 256 256 HOH HOH . M 6 HOH A 41 257 257 HOH HOH . M 6 HOH A 42 258 258 HOH HOH . M 6 HOH A 43 259 259 HOH HOH . M 6 HOH A 44 260 260 HOH HOH . M 6 HOH A 45 261 261 HOH HOH . M 6 HOH A 46 262 262 HOH HOH . M 6 HOH A 47 263 263 HOH HOH . M 6 HOH A 48 264 264 HOH HOH . M 6 HOH A 49 265 265 HOH HOH . M 6 HOH A 50 266 266 HOH HOH . M 6 HOH A 51 267 267 HOH HOH . M 6 HOH A 52 268 268 HOH HOH . M 6 HOH A 53 269 269 HOH HOH . M 6 HOH A 54 270 270 HOH HOH . M 6 HOH A 55 271 271 HOH HOH . M 6 HOH A 56 272 272 HOH HOH . M 6 HOH A 57 273 273 HOH HOH . M 6 HOH A 58 274 274 HOH HOH . M 6 HOH A 59 275 275 HOH HOH . M 6 HOH A 60 276 276 HOH HOH . M 6 HOH A 61 277 277 HOH HOH . M 6 HOH A 62 278 278 HOH HOH . M 6 HOH A 63 279 279 HOH HOH . M 6 HOH A 64 280 280 HOH HOH . M 6 HOH A 65 281 281 HOH HOH . M 6 HOH A 66 283 283 HOH HOH . M 6 HOH A 67 284 284 HOH HOH . M 6 HOH A 68 285 285 HOH HOH . M 6 HOH A 69 286 286 HOH HOH . M 6 HOH A 70 287 287 HOH HOH . M 6 HOH A 71 288 288 HOH HOH . M 6 HOH A 72 289 289 HOH HOH . M 6 HOH A 73 290 290 HOH HOH . M 6 HOH A 74 291 291 HOH HOH . M 6 HOH A 75 292 292 HOH HOH . M 6 HOH A 76 293 293 HOH HOH . M 6 HOH A 77 294 294 HOH HOH . M 6 HOH A 78 295 295 HOH HOH . M 6 HOH A 79 296 296 HOH HOH . M 6 HOH A 80 297 297 HOH HOH . M 6 HOH A 81 298 298 HOH HOH . M 6 HOH A 82 299 299 HOH HOH . M 6 HOH A 83 300 300 HOH HOH . M 6 HOH A 84 304 304 HOH HOH . M 6 HOH A 85 305 305 HOH HOH . M 6 HOH A 86 306 306 HOH HOH . M 6 HOH A 87 307 307 HOH HOH . M 6 HOH A 88 308 308 HOH HOH . M 6 HOH A 89 309 309 HOH HOH . M 6 HOH A 90 310 310 HOH HOH . M 6 HOH A 91 311 311 HOH HOH . M 6 HOH A 92 312 312 HOH HOH . M 6 HOH A 93 313 313 HOH HOH . M 6 HOH A 94 314 314 HOH HOH . M 6 HOH A 95 315 315 HOH HOH . M 6 HOH A 96 316 316 HOH HOH . M 6 HOH A 97 317 317 HOH HOH . M 6 HOH A 98 318 318 HOH HOH . M 6 HOH A 99 319 319 HOH HOH . M 6 HOH A 100 320 320 HOH HOH . M 6 HOH A 101 321 321 HOH HOH . M 6 HOH A 102 322 322 HOH HOH . M 6 HOH A 103 323 323 HOH HOH . M 6 HOH A 104 324 324 HOH HOH . M 6 HOH A 105 325 325 HOH HOH . M 6 HOH A 106 326 326 HOH HOH . M 6 HOH A 107 327 327 HOH HOH . M 6 HOH A 108 328 328 HOH HOH . M 6 HOH A 109 329 329 HOH HOH . M 6 HOH A 110 330 330 HOH HOH . M 6 HOH A 111 331 331 HOH HOH . M 6 HOH A 112 332 332 HOH HOH . M 6 HOH A 113 333 333 HOH HOH . M 6 HOH A 114 334 334 HOH HOH . M 6 HOH A 115 335 335 HOH HOH . M 6 HOH A 116 336 336 HOH HOH . M 6 HOH A 117 337 337 HOH HOH . M 6 HOH A 118 338 338 HOH HOH . M 6 HOH A 119 339 339 HOH HOH . M 6 HOH A 120 340 340 HOH HOH . M 6 HOH A 121 341 341 HOH HOH . M 6 HOH A 122 342 342 HOH HOH . M 6 HOH A 123 343 343 HOH HOH . M 6 HOH A 124 344 344 HOH HOH . M 6 HOH A 125 345 345 HOH HOH . M 6 HOH A 126 346 346 HOH HOH . M 6 HOH A 127 347 347 HOH HOH . M 6 HOH A 128 348 348 HOH HOH . M 6 HOH A 129 349 349 HOH HOH . M 6 HOH A 130 350 350 HOH HOH . M 6 HOH A 131 351 351 HOH HOH . M 6 HOH A 132 352 352 HOH HOH . M 6 HOH A 133 353 353 HOH HOH . M 6 HOH A 134 354 354 HOH HOH . M 6 HOH A 135 355 355 HOH HOH . M 6 HOH A 136 356 356 HOH HOH . M 6 HOH A 137 357 357 HOH HOH . M 6 HOH A 138 358 358 HOH HOH . M 6 HOH A 139 359 359 HOH HOH . M 6 HOH A 140 360 360 HOH HOH . M 6 HOH A 141 361 361 HOH HOH . M 6 HOH A 142 362 362 HOH HOH . M 6 HOH A 143 363 363 HOH HOH . M 6 HOH A 144 364 364 HOH HOH . M 6 HOH A 145 365 365 HOH HOH . M 6 HOH A 146 366 366 HOH HOH . M 6 HOH A 147 367 367 HOH HOH . M 6 HOH A 148 368 368 HOH HOH . M 6 HOH A 149 369 369 HOH HOH . M 6 HOH A 150 370 370 HOH HOH . M 6 HOH A 151 371 371 HOH HOH . M 6 HOH A 152 372 372 HOH HOH . M 6 HOH A 153 373 373 HOH HOH . M 6 HOH A 154 374 374 HOH HOH . M 6 HOH A 155 375 375 HOH HOH . M 6 HOH A 156 376 376 HOH HOH . M 6 HOH A 157 377 377 HOH HOH . M 6 HOH A 158 378 378 HOH HOH . M 6 HOH A 159 379 379 HOH HOH . M 6 HOH A 160 380 380 HOH HOH . M 6 HOH A 161 381 381 HOH HOH . M 6 HOH A 162 382 382 HOH HOH . M 6 HOH A 163 383 383 HOH HOH . M 6 HOH A 164 384 384 HOH HOH . M 6 HOH A 165 385 385 HOH HOH . M 6 HOH A 166 386 386 HOH HOH . M 6 HOH A 167 387 387 HOH HOH . M 6 HOH A 168 388 388 HOH HOH . M 6 HOH A 169 389 389 HOH HOH . M 6 HOH A 170 390 390 HOH HOH . M 6 HOH A 171 391 391 HOH HOH . M 6 HOH A 172 392 392 HOH HOH . M 6 HOH A 173 393 393 HOH HOH . M 6 HOH A 174 394 394 HOH HOH . M 6 HOH A 175 395 395 HOH HOH . M 6 HOH A 176 396 396 HOH HOH . M 6 HOH A 177 397 397 HOH HOH . M 6 HOH A 178 398 398 HOH HOH . M 6 HOH A 179 399 399 HOH HOH . M 6 HOH A 180 400 400 HOH HOH . M 6 HOH A 181 401 401 HOH HOH . M 6 HOH A 182 402 402 HOH HOH . M 6 HOH A 183 403 403 HOH HOH . M 6 HOH A 184 404 404 HOH HOH . M 6 HOH A 185 405 405 HOH HOH . M 6 HOH A 186 406 406 HOH HOH . M 6 HOH A 187 407 407 HOH HOH . M 6 HOH A 188 408 408 HOH HOH . M 6 HOH A 189 409 409 HOH HOH . M 6 HOH A 190 410 410 HOH HOH . M 6 HOH A 191 411 411 HOH HOH . M 6 HOH A 192 412 412 HOH HOH . M 6 HOH A 193 413 413 HOH HOH . M 6 HOH A 194 414 414 HOH HOH . M 6 HOH A 195 415 415 HOH HOH . M 6 HOH A 196 416 416 HOH HOH . M 6 HOH A 197 417 417 HOH HOH . M 6 HOH A 198 418 418 HOH HOH . M 6 HOH A 199 419 419 HOH HOH . M 6 HOH A 200 420 420 HOH HOH . M 6 HOH A 201 421 421 HOH HOH . M 6 HOH A 202 422 422 HOH HOH . M 6 HOH A 203 423 423 HOH HOH . M 6 HOH A 204 426 426 HOH HOH . M 6 HOH A 205 433 433 HOH HOH . M 6 HOH A 206 441 441 HOH HOH . M 6 HOH A 207 442 442 HOH HOH . M 6 HOH A 208 445 445 HOH HOH . M 6 HOH A 209 449 449 HOH HOH . M 6 HOH A 210 451 451 HOH HOH . M 6 HOH A 211 452 452 HOH HOH . M 6 HOH A 212 457 457 HOH HOH . M 6 HOH A 213 459 459 HOH HOH . M 6 HOH A 214 464 464 HOH HOH . M 6 HOH A 215 465 465 HOH HOH . M 6 HOH A 216 466 466 HOH HOH . M 6 HOH A 217 467 467 HOH HOH . M 6 HOH A 218 479 479 HOH HOH . M 6 HOH A 219 480 480 HOH HOH . M 6 HOH A 220 481 481 HOH HOH . M 6 HOH A 221 482 482 HOH HOH . M 6 HOH A 222 485 485 HOH HOH . M 6 HOH A 223 486 486 HOH HOH . M 6 HOH A 224 501 501 HOH HOH . M 6 HOH A 225 502 502 HOH HOH . M 6 HOH A 226 503 503 HOH HOH . M 6 HOH A 227 508 508 HOH HOH . M 6 HOH A 228 509 509 HOH HOH . M 6 HOH A 229 516 516 HOH HOH . M 6 HOH A 230 517 517 HOH HOH . M 6 HOH A 231 518 518 HOH HOH . M 6 HOH A 232 521 521 HOH HOH . M 6 HOH A 233 523 523 HOH HOH . M 6 HOH A 234 524 524 HOH HOH . M 6 HOH A 235 526 526 HOH HOH . M 6 HOH A 236 527 527 HOH HOH . M 6 HOH A 237 528 528 HOH HOH . M 6 HOH A 238 530 530 HOH HOH . M 6 HOH A 239 542 542 HOH HOH . M 6 HOH A 240 543 543 HOH HOH . M 6 HOH A 241 544 544 HOH HOH . M 6 HOH A 242 545 545 HOH HOH . M 6 HOH A 243 546 546 HOH HOH . M 6 HOH A 244 548 548 HOH HOH . M 6 HOH A 245 549 549 HOH HOH . M 6 HOH A 246 550 550 HOH HOH . M 6 HOH A 247 551 551 HOH HOH . M 6 HOH A 248 553 553 HOH HOH . M 6 HOH A 249 559 559 HOH HOH . M 6 HOH A 250 560 560 HOH HOH . M 6 HOH A 251 562 562 HOH HOH . M 6 HOH A 252 563 563 HOH HOH . M 6 HOH A 253 564 564 HOH HOH . M 6 HOH A 254 565 565 HOH HOH . M 6 HOH A 255 566 566 HOH HOH . M 6 HOH A 256 567 567 HOH HOH . M 6 HOH A 257 568 568 HOH HOH . M 6 HOH A 258 569 569 HOH HOH . M 6 HOH A 259 570 570 HOH HOH . M 6 HOH A 260 572 572 HOH HOH . M 6 HOH A 261 576 576 HOH HOH . M 6 HOH A 262 588 588 HOH HOH . M 6 HOH A 263 592 592 HOH HOH . M 6 HOH A 264 597 597 HOH HOH . M 6 HOH A 265 601 601 HOH HOH . M 6 HOH A 266 602 602 HOH HOH . N 6 HOH B 1 5 5 HOH HOH . N 6 HOH B 2 48 48 HOH HOH . N 6 HOH B 3 64 64 HOH HOH . N 6 HOH B 4 116 116 HOH HOH . N 6 HOH B 5 163 163 HOH HOH . N 6 HOH B 6 177 177 HOH HOH . N 6 HOH B 7 255 255 HOH HOH . N 6 HOH B 8 285 285 HOH HOH . N 6 HOH B 9 292 292 HOH HOH . N 6 HOH B 10 294 294 HOH HOH . N 6 HOH B 11 314 314 HOH HOH . N 6 HOH B 12 316 316 HOH HOH . N 6 HOH B 13 354 354 HOH HOH . N 6 HOH B 14 460 460 HOH HOH . N 6 HOH B 15 586 586 HOH HOH . N 6 HOH B 16 587 587 HOH HOH . N 6 HOH B 17 599 599 HOH HOH . O 6 HOH C 1 217 217 HOH HOH . O 6 HOH C 2 218 218 HOH HOH . O 6 HOH C 3 219 219 HOH HOH . O 6 HOH C 4 220 220 HOH HOH . O 6 HOH C 5 221 221 HOH HOH . O 6 HOH C 6 222 222 HOH HOH . O 6 HOH C 7 223 223 HOH HOH . O 6 HOH C 8 224 224 HOH HOH . O 6 HOH C 9 225 225 HOH HOH . O 6 HOH C 10 226 226 HOH HOH . O 6 HOH C 11 227 227 HOH HOH . O 6 HOH C 12 228 228 HOH HOH . O 6 HOH C 13 229 229 HOH HOH . O 6 HOH C 14 230 230 HOH HOH . O 6 HOH C 15 231 231 HOH HOH . O 6 HOH C 16 232 232 HOH HOH . O 6 HOH C 17 233 233 HOH HOH . O 6 HOH C 18 234 234 HOH HOH . O 6 HOH C 19 235 235 HOH HOH . O 6 HOH C 20 236 236 HOH HOH . O 6 HOH C 21 237 237 HOH HOH . O 6 HOH C 22 238 238 HOH HOH . O 6 HOH C 23 239 239 HOH HOH . O 6 HOH C 24 240 240 HOH HOH . O 6 HOH C 25 241 241 HOH HOH . O 6 HOH C 26 242 242 HOH HOH . O 6 HOH C 27 243 243 HOH HOH . O 6 HOH C 28 244 244 HOH HOH . O 6 HOH C 29 245 245 HOH HOH . O 6 HOH C 30 246 246 HOH HOH . O 6 HOH C 31 247 247 HOH HOH . O 6 HOH C 32 248 248 HOH HOH . O 6 HOH C 33 249 249 HOH HOH . O 6 HOH C 34 250 250 HOH HOH . O 6 HOH C 35 251 251 HOH HOH . O 6 HOH C 36 252 252 HOH HOH . O 6 HOH C 37 253 253 HOH HOH . O 6 HOH C 38 254 254 HOH HOH . O 6 HOH C 39 255 255 HOH HOH . O 6 HOH C 40 256 256 HOH HOH . O 6 HOH C 41 257 257 HOH HOH . O 6 HOH C 42 258 258 HOH HOH . O 6 HOH C 43 259 259 HOH HOH . O 6 HOH C 44 260 260 HOH HOH . O 6 HOH C 45 261 261 HOH HOH . O 6 HOH C 46 262 262 HOH HOH . O 6 HOH C 47 263 263 HOH HOH . O 6 HOH C 48 264 264 HOH HOH . O 6 HOH C 49 265 265 HOH HOH . O 6 HOH C 50 266 266 HOH HOH . O 6 HOH C 51 267 267 HOH HOH . O 6 HOH C 52 268 268 HOH HOH . O 6 HOH C 53 269 269 HOH HOH . O 6 HOH C 54 270 270 HOH HOH . O 6 HOH C 55 271 271 HOH HOH . O 6 HOH C 56 272 272 HOH HOH . O 6 HOH C 57 273 273 HOH HOH . O 6 HOH C 58 274 274 HOH HOH . O 6 HOH C 59 275 275 HOH HOH . O 6 HOH C 60 276 276 HOH HOH . O 6 HOH C 61 277 277 HOH HOH . O 6 HOH C 62 278 278 HOH HOH . O 6 HOH C 63 279 279 HOH HOH . O 6 HOH C 64 280 280 HOH HOH . O 6 HOH C 65 281 281 HOH HOH . O 6 HOH C 66 282 282 HOH HOH . O 6 HOH C 67 283 283 HOH HOH . O 6 HOH C 68 284 284 HOH HOH . O 6 HOH C 69 285 285 HOH HOH . O 6 HOH C 70 286 286 HOH HOH . O 6 HOH C 71 287 287 HOH HOH . O 6 HOH C 72 288 288 HOH HOH . O 6 HOH C 73 289 289 HOH HOH . O 6 HOH C 74 290 290 HOH HOH . O 6 HOH C 75 291 291 HOH HOH . O 6 HOH C 76 292 292 HOH HOH . O 6 HOH C 77 293 293 HOH HOH . O 6 HOH C 78 294 294 HOH HOH . O 6 HOH C 79 295 295 HOH HOH . O 6 HOH C 80 296 282 HOH HOH . O 6 HOH C 81 297 297 HOH HOH . O 6 HOH C 82 298 298 HOH HOH . O 6 HOH C 83 299 299 HOH HOH . O 6 HOH C 84 300 300 HOH HOH . O 6 HOH C 85 304 304 HOH HOH . O 6 HOH C 86 305 305 HOH HOH . O 6 HOH C 87 306 306 HOH HOH . O 6 HOH C 88 307 307 HOH HOH . O 6 HOH C 89 308 308 HOH HOH . O 6 HOH C 90 309 309 HOH HOH . O 6 HOH C 91 310 310 HOH HOH . O 6 HOH C 92 311 311 HOH HOH . O 6 HOH C 93 312 312 HOH HOH . O 6 HOH C 94 313 313 HOH HOH . O 6 HOH C 95 314 314 HOH HOH . O 6 HOH C 96 315 315 HOH HOH . O 6 HOH C 97 316 316 HOH HOH . O 6 HOH C 98 317 317 HOH HOH . O 6 HOH C 99 318 318 HOH HOH . O 6 HOH C 100 319 319 HOH HOH . O 6 HOH C 101 320 320 HOH HOH . O 6 HOH C 102 321 321 HOH HOH . O 6 HOH C 103 322 322 HOH HOH . O 6 HOH C 104 323 323 HOH HOH . O 6 HOH C 105 324 324 HOH HOH . O 6 HOH C 106 325 325 HOH HOH . O 6 HOH C 107 326 326 HOH HOH . O 6 HOH C 108 327 327 HOH HOH . O 6 HOH C 109 328 328 HOH HOH . O 6 HOH C 110 329 329 HOH HOH . O 6 HOH C 111 330 330 HOH HOH . O 6 HOH C 112 331 331 HOH HOH . O 6 HOH C 113 332 332 HOH HOH . O 6 HOH C 114 333 333 HOH HOH . O 6 HOH C 115 334 334 HOH HOH . O 6 HOH C 116 335 335 HOH HOH . O 6 HOH C 117 336 336 HOH HOH . O 6 HOH C 118 337 337 HOH HOH . O 6 HOH C 119 338 338 HOH HOH . O 6 HOH C 120 339 339 HOH HOH . O 6 HOH C 121 340 340 HOH HOH . O 6 HOH C 122 341 341 HOH HOH . O 6 HOH C 123 342 342 HOH HOH . O 6 HOH C 124 343 343 HOH HOH . O 6 HOH C 125 344 344 HOH HOH . O 6 HOH C 126 345 345 HOH HOH . O 6 HOH C 127 346 346 HOH HOH . O 6 HOH C 128 347 347 HOH HOH . O 6 HOH C 129 348 348 HOH HOH . O 6 HOH C 130 349 349 HOH HOH . O 6 HOH C 131 350 350 HOH HOH . O 6 HOH C 132 351 351 HOH HOH . O 6 HOH C 133 352 352 HOH HOH . O 6 HOH C 134 353 353 HOH HOH . O 6 HOH C 135 354 354 HOH HOH . O 6 HOH C 136 355 355 HOH HOH . O 6 HOH C 137 356 356 HOH HOH . O 6 HOH C 138 357 357 HOH HOH . O 6 HOH C 139 358 358 HOH HOH . O 6 HOH C 140 359 359 HOH HOH . O 6 HOH C 141 360 360 HOH HOH . O 6 HOH C 142 361 361 HOH HOH . O 6 HOH C 143 362 362 HOH HOH . O 6 HOH C 144 363 363 HOH HOH . O 6 HOH C 145 364 364 HOH HOH . O 6 HOH C 146 365 365 HOH HOH . O 6 HOH C 147 366 366 HOH HOH . O 6 HOH C 148 367 367 HOH HOH . O 6 HOH C 149 368 368 HOH HOH . O 6 HOH C 150 369 369 HOH HOH . O 6 HOH C 151 370 370 HOH HOH . O 6 HOH C 152 371 371 HOH HOH . O 6 HOH C 153 372 372 HOH HOH . O 6 HOH C 154 373 373 HOH HOH . O 6 HOH C 155 374 374 HOH HOH . O 6 HOH C 156 375 375 HOH HOH . O 6 HOH C 157 376 376 HOH HOH . O 6 HOH C 158 377 377 HOH HOH . O 6 HOH C 159 378 378 HOH HOH . O 6 HOH C 160 379 379 HOH HOH . O 6 HOH C 161 380 380 HOH HOH . O 6 HOH C 162 381 381 HOH HOH . O 6 HOH C 163 382 382 HOH HOH . O 6 HOH C 164 383 383 HOH HOH . O 6 HOH C 165 388 388 HOH HOH . O 6 HOH C 166 389 389 HOH HOH . O 6 HOH C 167 398 398 HOH HOH . O 6 HOH C 168 399 399 HOH HOH . O 6 HOH C 169 400 400 HOH HOH . O 6 HOH C 170 401 401 HOH HOH . O 6 HOH C 171 402 402 HOH HOH . O 6 HOH C 172 403 403 HOH HOH . O 6 HOH C 173 404 404 HOH HOH . O 6 HOH C 174 405 405 HOH HOH . O 6 HOH C 175 408 408 HOH HOH . O 6 HOH C 176 409 409 HOH HOH . O 6 HOH C 177 420 420 HOH HOH . O 6 HOH C 178 422 422 HOH HOH . O 6 HOH C 179 424 424 HOH HOH . O 6 HOH C 180 427 427 HOH HOH . O 6 HOH C 181 428 428 HOH HOH . O 6 HOH C 182 431 431 HOH HOH . O 6 HOH C 183 432 432 HOH HOH . O 6 HOH C 184 434 434 HOH HOH . O 6 HOH C 185 435 435 HOH HOH . O 6 HOH C 186 436 436 HOH HOH . O 6 HOH C 187 437 437 HOH HOH . O 6 HOH C 188 439 439 HOH HOH . O 6 HOH C 189 440 440 HOH HOH . O 6 HOH C 190 443 443 HOH HOH . O 6 HOH C 191 447 447 HOH HOH . O 6 HOH C 192 463 463 HOH HOH . O 6 HOH C 193 469 469 HOH HOH . O 6 HOH C 194 470 470 HOH HOH . O 6 HOH C 195 471 471 HOH HOH . O 6 HOH C 196 472 472 HOH HOH . O 6 HOH C 197 473 473 HOH HOH . O 6 HOH C 198 475 475 HOH HOH . O 6 HOH C 199 476 476 HOH HOH . O 6 HOH C 200 477 477 HOH HOH . O 6 HOH C 201 478 478 HOH HOH . O 6 HOH C 202 483 483 HOH HOH . O 6 HOH C 203 484 484 HOH HOH . O 6 HOH C 204 487 487 HOH HOH . O 6 HOH C 205 488 488 HOH HOH . O 6 HOH C 206 489 489 HOH HOH . O 6 HOH C 207 490 490 HOH HOH . O 6 HOH C 208 491 491 HOH HOH . O 6 HOH C 209 493 493 HOH HOH . O 6 HOH C 210 494 494 HOH HOH . O 6 HOH C 211 495 495 HOH HOH . O 6 HOH C 212 496 496 HOH HOH . O 6 HOH C 213 498 498 HOH HOH . O 6 HOH C 214 499 499 HOH HOH . O 6 HOH C 215 500 500 HOH HOH . O 6 HOH C 216 504 504 HOH HOH . O 6 HOH C 217 506 506 HOH HOH . O 6 HOH C 218 511 511 HOH HOH . O 6 HOH C 219 512 512 HOH HOH . O 6 HOH C 220 513 513 HOH HOH . O 6 HOH C 221 514 514 HOH HOH . O 6 HOH C 222 520 520 HOH HOH . O 6 HOH C 223 525 525 HOH HOH . O 6 HOH C 224 532 532 HOH HOH . O 6 HOH C 225 533 533 HOH HOH . O 6 HOH C 226 534 534 HOH HOH . O 6 HOH C 227 535 535 HOH HOH . O 6 HOH C 228 537 537 HOH HOH . O 6 HOH C 229 540 540 HOH HOH . O 6 HOH C 230 541 541 HOH HOH . O 6 HOH C 231 555 555 HOH HOH . O 6 HOH C 232 556 556 HOH HOH . O 6 HOH C 233 557 557 HOH HOH . O 6 HOH C 234 571 571 HOH HOH . O 6 HOH C 235 573 573 HOH HOH . O 6 HOH C 236 577 577 HOH HOH . O 6 HOH C 237 578 578 HOH HOH . O 6 HOH C 238 579 579 HOH HOH . O 6 HOH C 239 580 580 HOH HOH . O 6 HOH C 240 582 582 HOH HOH . O 6 HOH C 241 589 589 HOH HOH . O 6 HOH C 242 591 591 HOH HOH . O 6 HOH C 243 593 593 HOH HOH . O 6 HOH C 244 594 594 HOH HOH . O 6 HOH C 245 598 598 HOH HOH . O 6 HOH C 246 604 604 HOH HOH . O 6 HOH C 247 605 605 HOH HOH . O 6 HOH C 248 606 606 HOH HOH . P 6 HOH D 1 8 8 HOH HOH . P 6 HOH D 2 19 19 HOH HOH . P 6 HOH D 3 94 94 HOH HOH . P 6 HOH D 4 182 182 HOH HOH . P 6 HOH D 5 211 211 HOH HOH . P 6 HOH D 6 253 253 HOH HOH . P 6 HOH D 7 283 283 HOH HOH . P 6 HOH D 8 318 318 HOH HOH . P 6 HOH D 9 383 383 HOH HOH . P 6 HOH D 10 390 390 HOH HOH . P 6 HOH D 11 430 430 HOH HOH . P 6 HOH D 12 446 446 HOH HOH . P 6 HOH D 13 461 461 HOH HOH . P 6 HOH D 14 507 507 HOH HOH . P 6 HOH D 15 581 581 HOH HOH . P 6 HOH D 16 595 595 HOH HOH . P 6 HOH D 17 600 600 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . F 4 55.132 -9.987 39.025 1 20.97 ? PB GDP 302 A 1 HETATM 2 O O1B GDP . . . F 4 55.188 -9.8 37.541 1 20.56 ? O1B GDP 302 A 1 HETATM 3 O O2B GDP . . . F 4 56.182 -10.994 39.478 1 21.53 ? O2B GDP 302 A 1 HETATM 4 O O3B GDP . . . F 4 55.289 -8.662 39.707 1 19.88 ? O3B GDP 302 A 1 HETATM 5 O O3A GDP . . . F 4 53.707 -10.58 39.46 1 21.13 ? O3A GDP 302 A 1 HETATM 6 P PA GDP . . . F 4 52.805 -11.5 38.504 1 21.02 ? PA GDP 302 A 1 HETATM 7 O O1A GDP . . . F 4 52.098 -10.662 37.46 1 19.96 ? O1A GDP 302 A 1 HETATM 8 O O2A GDP . . . F 4 53.565 -12.666 37.923 1 20.23 ? O2A GDP 302 A 1 HETATM 9 O O5' GDP . . . F 4 51.704 -12.026 39.544 1 19.64 ? O5' GDP 302 A 1 HETATM 10 C C5' GDP . . . F 4 52.115 -12.769 40.699 1 23.44 ? C5' GDP 302 A 1 HETATM 11 C C4' GDP . . . F 4 50.9 -13.463 41.291 1 24.62 ? C4' GDP 302 A 1 HETATM 12 O O4' GDP . . . F 4 49.956 -12.488 41.742 1 24.3 ? O4' GDP 302 A 1 HETATM 13 C C3' GDP . . . F 4 50.221 -14.272 40.206 1 29.2 ? C3' GDP 302 A 1 HETATM 14 O O3' GDP . . . F 4 49.787 -15.527 40.753 1 31.84 ? O3' GDP 302 A 1 HETATM 15 C C2' GDP . . . F 4 49.026 -13.426 39.812 1 28.68 ? C2' GDP 302 A 1 HETATM 16 O O2' GDP . . . F 4 47.925 -14.222 39.387 1 27.43 ? O2' GDP 302 A 1 HETATM 17 C C1' GDP . . . F 4 48.697 -12.684 41.093 1 26.68 ? C1' GDP 302 A 1 HETATM 18 N N9 GDP . . . F 4 48.056 -11.373 40.831 1 26.78 ? N9 GDP 302 A 1 HETATM 19 C C8 GDP . . . F 4 48.546 -10.374 40.062 1 24.51 ? C8 GDP 302 A 1 HETATM 20 N N7 GDP . . . F 4 47.7 -9.311 40.053 1 21.45 ? N7 GDP 302 A 1 HETATM 21 C C5 GDP . . . F 4 46.651 -9.63 40.838 1 20.84 ? C5 GDP 302 A 1 HETATM 22 C C6 GDP . . . F 4 45.406 -8.965 41.269 1 24.25 ? C6 GDP 302 A 1 HETATM 23 O O6 GDP . . . F 4 45.132 -7.806 40.877 1 21.39 ? O6 GDP 302 A 1 HETATM 24 N N1 GDP . . . F 4 44.586 -9.644 42.086 1 23.52 ? N1 GDP 302 A 1 HETATM 25 C C2 GDP . . . F 4 44.852 -10.89 42.524 1 25.48 ? C2 GDP 302 A 1 HETATM 26 N N2 GDP . . . F 4 43.956 -11.497 43.344 1 27.74 ? N2 GDP 302 A 1 HETATM 27 N N3 GDP . . . F 4 45.972 -11.566 42.168 1 21.66 ? N3 GDP 302 A 1 HETATM 28 C C4 GDP . . . F 4 46.893 -10.987 41.352 1 25.28 ? C4 GDP 302 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 28 #