data_3GK3 # _model_server_result.job_id CtjyUNmbOq6pHIh1KDcm2w _model_server_result.datetime_utc '2024-11-22 19:11:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gk3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":249}' # _entry.id 3GK3 # _exptl.entry_id 3GK3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GK3 _cell.length_a 70.57 _cell.length_b 102.92 _cell.length_c 137.24 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GK3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3GK3 _atom_sites.fract_transf_matrix[1][1] 0.01417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 249 3 PO4 PO4 . F 2 PO4 B 1 249 1 PO4 PO4 . G 2 PO4 C 1 249 4 PO4 PO4 . H 2 PO4 D 1 249 2 PO4 PO4 . I 3 HOH A 1 250 1 HOH HOH . I 3 HOH A 2 251 2 HOH HOH . I 3 HOH A 3 252 15 HOH HOH . I 3 HOH A 4 253 16 HOH HOH . I 3 HOH A 5 254 25 HOH HOH . I 3 HOH A 6 255 27 HOH HOH . I 3 HOH A 7 256 256 HOH HOH . I 3 HOH A 8 257 33 HOH HOH . I 3 HOH A 9 258 258 HOH HOH . I 3 HOH A 10 259 35 HOH HOH . I 3 HOH A 11 260 260 HOH HOH . I 3 HOH A 12 261 261 HOH HOH . I 3 HOH A 13 262 262 HOH HOH . I 3 HOH A 14 263 263 HOH HOH . I 3 HOH A 15 264 264 HOH HOH . I 3 HOH A 16 265 265 HOH HOH . I 3 HOH A 17 266 38 HOH HOH . I 3 HOH A 18 267 42 HOH HOH . I 3 HOH A 19 268 50 HOH HOH . I 3 HOH A 20 269 68 HOH HOH . I 3 HOH A 21 270 72 HOH HOH . I 3 HOH A 22 271 78 HOH HOH . I 3 HOH A 23 272 82 HOH HOH . I 3 HOH A 24 273 86 HOH HOH . I 3 HOH A 25 274 90 HOH HOH . I 3 HOH A 26 275 101 HOH HOH . I 3 HOH A 27 276 103 HOH HOH . I 3 HOH A 28 277 112 HOH HOH . I 3 HOH A 29 278 114 HOH HOH . I 3 HOH A 30 279 115 HOH HOH . I 3 HOH A 31 280 120 HOH HOH . I 3 HOH A 32 281 123 HOH HOH . I 3 HOH A 33 282 124 HOH HOH . I 3 HOH A 34 283 126 HOH HOH . I 3 HOH A 35 284 129 HOH HOH . I 3 HOH A 36 285 131 HOH HOH . I 3 HOH A 37 286 133 HOH HOH . I 3 HOH A 38 287 134 HOH HOH . I 3 HOH A 39 288 136 HOH HOH . I 3 HOH A 40 289 140 HOH HOH . I 3 HOH A 41 290 142 HOH HOH . I 3 HOH A 42 291 149 HOH HOH . I 3 HOH A 43 292 153 HOH HOH . I 3 HOH A 44 293 161 HOH HOH . I 3 HOH A 45 294 162 HOH HOH . I 3 HOH A 46 295 163 HOH HOH . I 3 HOH A 47 296 164 HOH HOH . I 3 HOH A 48 297 165 HOH HOH . I 3 HOH A 49 298 169 HOH HOH . I 3 HOH A 50 299 178 HOH HOH . I 3 HOH A 51 300 184 HOH HOH . I 3 HOH A 52 301 196 HOH HOH . I 3 HOH A 53 302 201 HOH HOH . I 3 HOH A 54 303 203 HOH HOH . I 3 HOH A 55 304 204 HOH HOH . I 3 HOH A 56 305 210 HOH HOH . I 3 HOH A 57 306 211 HOH HOH . I 3 HOH A 58 307 212 HOH HOH . I 3 HOH A 59 308 213 HOH HOH . I 3 HOH A 60 309 214 HOH HOH . I 3 HOH A 61 310 215 HOH HOH . I 3 HOH A 62 311 216 HOH HOH . I 3 HOH A 63 312 217 HOH HOH . J 3 HOH B 1 250 3 HOH HOH . J 3 HOH B 2 251 7 HOH HOH . J 3 HOH B 3 252 9 HOH HOH . J 3 HOH B 4 253 10 HOH HOH . J 3 HOH B 5 254 11 HOH HOH . J 3 HOH B 6 255 18 HOH HOH . J 3 HOH B 7 256 20 HOH HOH . J 3 HOH B 8 257 21 HOH HOH . J 3 HOH B 9 258 23 HOH HOH . J 3 HOH B 10 259 259 HOH HOH . J 3 HOH B 11 260 24 HOH HOH . J 3 HOH B 12 261 28 HOH HOH . J 3 HOH B 13 262 39 HOH HOH . J 3 HOH B 14 263 41 HOH HOH . J 3 HOH B 15 264 44 HOH HOH . J 3 HOH B 16 265 45 HOH HOH . J 3 HOH B 17 266 266 HOH HOH . J 3 HOH B 18 267 267 HOH HOH . J 3 HOH B 19 268 268 HOH HOH . J 3 HOH B 20 269 47 HOH HOH . J 3 HOH B 21 270 270 HOH HOH . J 3 HOH B 22 271 51 HOH HOH . J 3 HOH B 23 272 272 HOH HOH . J 3 HOH B 24 273 52 HOH HOH . J 3 HOH B 25 274 59 HOH HOH . J 3 HOH B 26 275 61 HOH HOH . J 3 HOH B 27 276 62 HOH HOH . J 3 HOH B 28 277 63 HOH HOH . J 3 HOH B 29 278 67 HOH HOH . J 3 HOH B 30 279 74 HOH HOH . J 3 HOH B 31 280 75 HOH HOH . J 3 HOH B 32 281 81 HOH HOH . J 3 HOH B 33 282 84 HOH HOH . J 3 HOH B 34 283 87 HOH HOH . J 3 HOH B 35 284 92 HOH HOH . J 3 HOH B 36 285 93 HOH HOH . J 3 HOH B 37 286 94 HOH HOH . J 3 HOH B 38 287 97 HOH HOH . J 3 HOH B 39 288 99 HOH HOH . J 3 HOH B 40 289 100 HOH HOH . J 3 HOH B 41 290 102 HOH HOH . J 3 HOH B 42 291 104 HOH HOH . J 3 HOH B 43 292 105 HOH HOH . J 3 HOH B 44 293 106 HOH HOH . J 3 HOH B 45 294 109 HOH HOH . J 3 HOH B 46 295 110 HOH HOH . J 3 HOH B 47 296 122 HOH HOH . J 3 HOH B 48 297 125 HOH HOH . J 3 HOH B 49 298 132 HOH HOH . J 3 HOH B 50 299 135 HOH HOH . J 3 HOH B 51 300 137 HOH HOH . J 3 HOH B 52 301 138 HOH HOH . J 3 HOH B 53 302 141 HOH HOH . J 3 HOH B 54 303 144 HOH HOH . J 3 HOH B 55 304 148 HOH HOH . J 3 HOH B 56 305 152 HOH HOH . J 3 HOH B 57 306 154 HOH HOH . J 3 HOH B 58 307 156 HOH HOH . J 3 HOH B 59 308 167 HOH HOH . J 3 HOH B 60 309 170 HOH HOH . J 3 HOH B 61 310 174 HOH HOH . J 3 HOH B 62 311 185 HOH HOH . J 3 HOH B 63 312 191 HOH HOH . J 3 HOH B 64 313 192 HOH HOH . J 3 HOH B 65 314 195 HOH HOH . J 3 HOH B 66 315 200 HOH HOH . J 3 HOH B 67 316 207 HOH HOH . J 3 HOH B 68 317 208 HOH HOH . J 3 HOH B 69 318 218 HOH HOH . J 3 HOH B 70 319 219 HOH HOH . J 3 HOH B 71 320 220 HOH HOH . J 3 HOH B 72 321 221 HOH HOH . J 3 HOH B 73 322 222 HOH HOH . J 3 HOH B 74 323 223 HOH HOH . J 3 HOH B 75 324 239 HOH HOH . K 3 HOH C 1 250 5 HOH HOH . K 3 HOH C 2 251 6 HOH HOH . K 3 HOH C 3 252 14 HOH HOH . K 3 HOH C 4 253 17 HOH HOH . K 3 HOH C 5 254 22 HOH HOH . K 3 HOH C 6 255 26 HOH HOH . K 3 HOH C 7 256 30 HOH HOH . K 3 HOH C 8 257 31 HOH HOH . K 3 HOH C 9 258 37 HOH HOH . K 3 HOH C 10 259 40 HOH HOH . K 3 HOH C 11 260 43 HOH HOH . K 3 HOH C 12 261 48 HOH HOH . K 3 HOH C 13 262 49 HOH HOH . K 3 HOH C 14 263 53 HOH HOH . K 3 HOH C 15 264 55 HOH HOH . K 3 HOH C 16 265 56 HOH HOH . K 3 HOH C 17 266 58 HOH HOH . K 3 HOH C 18 267 64 HOH HOH . K 3 HOH C 19 268 65 HOH HOH . K 3 HOH C 20 269 269 HOH HOH . K 3 HOH C 21 270 66 HOH HOH . K 3 HOH C 22 271 271 HOH HOH . K 3 HOH C 23 272 69 HOH HOH . K 3 HOH C 24 273 76 HOH HOH . K 3 HOH C 25 274 77 HOH HOH . K 3 HOH C 26 275 79 HOH HOH . K 3 HOH C 27 276 80 HOH HOH . K 3 HOH C 28 277 88 HOH HOH . K 3 HOH C 29 278 89 HOH HOH . K 3 HOH C 30 279 96 HOH HOH . K 3 HOH C 31 280 107 HOH HOH . K 3 HOH C 32 281 108 HOH HOH . K 3 HOH C 33 282 113 HOH HOH . K 3 HOH C 34 283 117 HOH HOH . K 3 HOH C 35 284 127 HOH HOH . K 3 HOH C 36 285 128 HOH HOH . K 3 HOH C 37 286 130 HOH HOH . K 3 HOH C 38 287 139 HOH HOH . K 3 HOH C 39 288 143 HOH HOH . K 3 HOH C 40 289 150 HOH HOH . K 3 HOH C 41 290 151 HOH HOH . K 3 HOH C 42 291 159 HOH HOH . K 3 HOH C 43 292 160 HOH HOH . K 3 HOH C 44 293 168 HOH HOH . K 3 HOH C 45 294 171 HOH HOH . K 3 HOH C 46 295 172 HOH HOH . K 3 HOH C 47 296 175 HOH HOH . K 3 HOH C 48 297 179 HOH HOH . K 3 HOH C 49 298 182 HOH HOH . K 3 HOH C 50 299 183 HOH HOH . K 3 HOH C 51 300 187 HOH HOH . K 3 HOH C 52 301 190 HOH HOH . K 3 HOH C 53 302 193 HOH HOH . K 3 HOH C 54 303 194 HOH HOH . K 3 HOH C 55 304 197 HOH HOH . K 3 HOH C 56 305 202 HOH HOH . K 3 HOH C 57 306 205 HOH HOH . K 3 HOH C 58 307 224 HOH HOH . K 3 HOH C 59 308 225 HOH HOH . K 3 HOH C 60 309 226 HOH HOH . K 3 HOH C 61 310 227 HOH HOH . K 3 HOH C 62 311 228 HOH HOH . K 3 HOH C 63 312 229 HOH HOH . K 3 HOH C 64 313 230 HOH HOH . K 3 HOH C 65 314 231 HOH HOH . K 3 HOH C 66 315 232 HOH HOH . K 3 HOH C 67 316 233 HOH HOH . K 3 HOH C 68 317 234 HOH HOH . K 3 HOH C 69 318 237 HOH HOH . K 3 HOH C 70 319 238 HOH HOH . K 3 HOH C 71 320 240 HOH HOH . L 3 HOH D 1 250 250 HOH HOH . L 3 HOH D 2 251 251 HOH HOH . L 3 HOH D 3 252 252 HOH HOH . L 3 HOH D 4 253 253 HOH HOH . L 3 HOH D 5 254 254 HOH HOH . L 3 HOH D 6 255 255 HOH HOH . L 3 HOH D 7 256 4 HOH HOH . L 3 HOH D 8 257 257 HOH HOH . L 3 HOH D 9 258 8 HOH HOH . L 3 HOH D 10 259 12 HOH HOH . L 3 HOH D 11 260 13 HOH HOH . L 3 HOH D 12 261 19 HOH HOH . L 3 HOH D 13 262 29 HOH HOH . L 3 HOH D 14 263 32 HOH HOH . L 3 HOH D 15 264 34 HOH HOH . L 3 HOH D 16 265 36 HOH HOH . L 3 HOH D 17 266 46 HOH HOH . L 3 HOH D 18 267 54 HOH HOH . L 3 HOH D 19 268 57 HOH HOH . L 3 HOH D 20 269 60 HOH HOH . L 3 HOH D 21 270 70 HOH HOH . L 3 HOH D 22 271 71 HOH HOH . L 3 HOH D 23 272 73 HOH HOH . L 3 HOH D 24 273 273 HOH HOH . L 3 HOH D 25 274 274 HOH HOH . L 3 HOH D 26 275 275 HOH HOH . L 3 HOH D 27 276 276 HOH HOH . L 3 HOH D 28 277 83 HOH HOH . L 3 HOH D 29 278 85 HOH HOH . L 3 HOH D 30 279 91 HOH HOH . L 3 HOH D 31 280 95 HOH HOH . L 3 HOH D 32 281 98 HOH HOH . L 3 HOH D 33 282 111 HOH HOH . L 3 HOH D 34 283 116 HOH HOH . L 3 HOH D 35 284 118 HOH HOH . L 3 HOH D 36 285 119 HOH HOH . L 3 HOH D 37 286 121 HOH HOH . L 3 HOH D 38 287 145 HOH HOH . L 3 HOH D 39 288 146 HOH HOH . L 3 HOH D 40 289 147 HOH HOH . L 3 HOH D 41 290 155 HOH HOH . L 3 HOH D 42 291 157 HOH HOH . L 3 HOH D 43 292 158 HOH HOH . L 3 HOH D 44 293 166 HOH HOH . L 3 HOH D 45 294 173 HOH HOH . L 3 HOH D 46 295 176 HOH HOH . L 3 HOH D 47 296 177 HOH HOH . L 3 HOH D 48 297 180 HOH HOH . L 3 HOH D 49 298 181 HOH HOH . L 3 HOH D 50 299 186 HOH HOH . L 3 HOH D 51 300 188 HOH HOH . L 3 HOH D 52 301 189 HOH HOH . L 3 HOH D 53 302 198 HOH HOH . L 3 HOH D 54 303 199 HOH HOH . L 3 HOH D 55 304 206 HOH HOH . L 3 HOH D 56 305 209 HOH HOH . L 3 HOH D 57 306 235 HOH HOH . L 3 HOH D 58 307 236 HOH HOH . L 3 HOH D 59 308 241 HOH HOH . L 3 HOH D 60 309 242 HOH HOH . L 3 HOH D 61 310 243 HOH HOH . L 3 HOH D 62 311 244 HOH HOH . L 3 HOH D 63 312 245 HOH HOH . L 3 HOH D 64 313 246 HOH HOH . L 3 HOH D 65 314 247 HOH HOH . L 3 HOH D 66 315 248 HOH HOH . L 3 HOH D 67 316 249 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 12.431 -0.33 24.687 1 38.5 ? P PO4 249 A 1 HETATM 2 O O1 PO4 . . . E 2 13.699 -1.101 24.361 1 45.43 ? O1 PO4 249 A 1 HETATM 3 O O2 PO4 . . . E 2 12.012 0.57 23.552 1 42.04 ? O2 PO4 249 A 1 HETATM 4 O O3 PO4 . . . E 2 11.343 -1.376 24.872 1 45.8 ? O3 PO4 249 A 1 HETATM 5 O O4 PO4 . . . E 2 12.695 0.683 25.792 1 37.45 ? O4 PO4 249 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #