data_3GKM
#
_model_server_result.job_id            8FQGkzP5ZgzUzD_GaJNgmg 
_model_server_result.datetime_utc      '2024-11-19 22:22:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gkm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":409}' 
#
_entry.id    3GKM 
#
_exptl.entry_id    3GKM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.243 
_cell.angle_gamma         90 
_cell.entry_id            3GKM 
_cell.length_a            35.397 
_cell.length_b            51.421 
_cell.length_c            39.844 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GKM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 FMT doub 83 n n 
C O2 FMT sing 84 n n 
C H FMT sing 85 n n 
O2 HO2 FMT sing 86 n n 
#
_atom_sites.entry_id                     3GKM 
_atom_sites.fract_transf_matrix[1][1]    0.028251 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006649 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025784 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMT A 1 408 408 FMT FMT . 
C 2 FMT A 1 409 409 FMT FMT . 
D 2 FMT A 1 410 410 FMT FMT . 
E 2 FMT A 1 411 411 FMT FMT . 
F 2 FMT A 1 412 412 FMT FMT . 
G 2 FMT A 1 413 413 FMT FMT . 
H 2 FMT A 1 414 414 FMT FMT . 
I 2 FMT A 1 415 415 FMT FMT . 
J 2 FMT A 1 416 416 FMT FMT . 
K 2 FMT A 1 417 417 FMT FMT . 
L 2 FMT A 1 418 418 FMT FMT . 
M 2 FMT A 1 419 419 FMT FMT . 
N 3 HOH A 1 161 161 HOH HOH . 
N 3 HOH A 2 162 162 HOH HOH . 
N 3 HOH A 3 163 163 HOH HOH . 
N 3 HOH A 4 164 164 HOH HOH . 
N 3 HOH A 5 165 165 HOH HOH . 
N 3 HOH A 6 166 166 HOH HOH . 
N 3 HOH A 7 167 167 HOH HOH . 
N 3 HOH A 8 168 168 HOH HOH . 
N 3 HOH A 9 169 169 HOH HOH . 
N 3 HOH A 10 170 170 HOH HOH . 
N 3 HOH A 11 171 171 HOH HOH . 
N 3 HOH A 12 172 172 HOH HOH . 
N 3 HOH A 13 173 173 HOH HOH . 
N 3 HOH A 14 174 174 HOH HOH . 
N 3 HOH A 15 175 175 HOH HOH . 
N 3 HOH A 16 176 176 HOH HOH . 
N 3 HOH A 17 177 177 HOH HOH . 
N 3 HOH A 18 178 178 HOH HOH . 
N 3 HOH A 19 179 179 HOH HOH . 
N 3 HOH A 20 180 180 HOH HOH . 
N 3 HOH A 21 181 181 HOH HOH . 
N 3 HOH A 22 182 182 HOH HOH . 
N 3 HOH A 23 183 183 HOH HOH . 
N 3 HOH A 24 184 184 HOH HOH . 
N 3 HOH A 25 185 185 HOH HOH . 
N 3 HOH A 26 186 186 HOH HOH . 
N 3 HOH A 27 187 187 HOH HOH . 
N 3 HOH A 28 188 188 HOH HOH . 
N 3 HOH A 29 189 189 HOH HOH . 
N 3 HOH A 30 190 190 HOH HOH . 
N 3 HOH A 31 191 191 HOH HOH . 
N 3 HOH A 32 192 192 HOH HOH . 
N 3 HOH A 33 193 193 HOH HOH . 
N 3 HOH A 34 194 194 HOH HOH . 
N 3 HOH A 35 195 195 HOH HOH . 
N 3 HOH A 36 196 196 HOH HOH . 
N 3 HOH A 37 197 197 HOH HOH . 
N 3 HOH A 38 198 198 HOH HOH . 
N 3 HOH A 39 199 199 HOH HOH . 
N 3 HOH A 40 200 200 HOH HOH . 
N 3 HOH A 41 201 201 HOH HOH . 
N 3 HOH A 42 202 202 HOH HOH . 
N 3 HOH A 43 203 203 HOH HOH . 
N 3 HOH A 44 204 204 HOH HOH . 
N 3 HOH A 45 205 205 HOH HOH . 
N 3 HOH A 46 206 206 HOH HOH . 
N 3 HOH A 47 207 207 HOH HOH . 
N 3 HOH A 48 208 208 HOH HOH . 
N 3 HOH A 49 209 209 HOH HOH . 
N 3 HOH A 50 210 210 HOH HOH . 
N 3 HOH A 51 211 211 HOH HOH . 
N 3 HOH A 52 212 212 HOH HOH . 
N 3 HOH A 53 213 213 HOH HOH . 
N 3 HOH A 54 214 214 HOH HOH . 
N 3 HOH A 55 215 215 HOH HOH . 
N 3 HOH A 56 216 216 HOH HOH . 
N 3 HOH A 57 217 217 HOH HOH . 
N 3 HOH A 58 218 218 HOH HOH . 
N 3 HOH A 59 219 219 HOH HOH . 
N 3 HOH A 60 220 220 HOH HOH . 
N 3 HOH A 61 221 221 HOH HOH . 
N 3 HOH A 62 222 222 HOH HOH . 
N 3 HOH A 63 223 223 HOH HOH . 
N 3 HOH A 64 224 224 HOH HOH . 
N 3 HOH A 65 225 225 HOH HOH . 
N 3 HOH A 66 226 226 HOH HOH . 
N 3 HOH A 67 227 227 HOH HOH . 
N 3 HOH A 68 228 228 HOH HOH . 
N 3 HOH A 69 229 229 HOH HOH . 
N 3 HOH A 70 230 230 HOH HOH . 
N 3 HOH A 71 231 231 HOH HOH . 
N 3 HOH A 72 232 232 HOH HOH . 
N 3 HOH A 73 233 233 HOH HOH . 
N 3 HOH A 74 234 234 HOH HOH . 
N 3 HOH A 75 235 235 HOH HOH . 
N 3 HOH A 76 236 236 HOH HOH . 
N 3 HOH A 77 237 237 HOH HOH . 
N 3 HOH A 78 238 238 HOH HOH . 
N 3 HOH A 79 239 239 HOH HOH . 
N 3 HOH A 80 240 240 HOH HOH . 
N 3 HOH A 81 241 241 HOH HOH . 
N 3 HOH A 82 242 242 HOH HOH . 
N 3 HOH A 83 243 243 HOH HOH . 
N 3 HOH A 84 244 244 HOH HOH . 
N 3 HOH A 85 245 245 HOH HOH . 
N 3 HOH A 86 246 246 HOH HOH . 
N 3 HOH A 87 247 247 HOH HOH . 
N 3 HOH A 88 248 248 HOH HOH . 
N 3 HOH A 89 249 249 HOH HOH . 
N 3 HOH A 90 250 250 HOH HOH . 
N 3 HOH A 91 251 251 HOH HOH . 
N 3 HOH A 92 252 252 HOH HOH . 
N 3 HOH A 93 253 253 HOH HOH . 
N 3 HOH A 94 254 254 HOH HOH . 
N 3 HOH A 95 255 255 HOH HOH . 
N 3 HOH A 96 256 256 HOH HOH . 
N 3 HOH A 97 257 257 HOH HOH . 
N 3 HOH A 98 258 258 HOH HOH . 
N 3 HOH A 99 259 259 HOH HOH . 
N 3 HOH A 100 260 260 HOH HOH . 
N 3 HOH A 101 261 261 HOH HOH . 
N 3 HOH A 102 262 262 HOH HOH . 
N 3 HOH A 103 263 263 HOH HOH . 
N 3 HOH A 104 264 264 HOH HOH . 
N 3 HOH A 105 265 265 HOH HOH . 
N 3 HOH A 106 266 266 HOH HOH . 
N 3 HOH A 107 267 267 HOH HOH . 
N 3 HOH A 108 268 268 HOH HOH . 
N 3 HOH A 109 269 269 HOH HOH . 
N 3 HOH A 110 270 270 HOH HOH . 
N 3 HOH A 111 271 271 HOH HOH . 
N 3 HOH A 112 272 272 HOH HOH . 
N 3 HOH A 113 273 273 HOH HOH . 
N 3 HOH A 114 274 274 HOH HOH . 
N 3 HOH A 115 275 275 HOH HOH . 
N 3 HOH A 116 276 276 HOH HOH . 
N 3 HOH A 117 277 277 HOH HOH . 
N 3 HOH A 118 278 278 HOH HOH . 
N 3 HOH A 119 279 279 HOH HOH . 
N 3 HOH A 120 280 280 HOH HOH . 
N 3 HOH A 121 281 281 HOH HOH . 
N 3 HOH A 122 282 282 HOH HOH . 
N 3 HOH A 123 283 283 HOH HOH . 
N 3 HOH A 124 284 284 HOH HOH . 
N 3 HOH A 125 285 285 HOH HOH . 
N 3 HOH A 126 286 286 HOH HOH . 
N 3 HOH A 127 287 287 HOH HOH . 
N 3 HOH A 128 288 288 HOH HOH . 
N 3 HOH A 129 289 289 HOH HOH . 
N 3 HOH A 130 290 290 HOH HOH . 
N 3 HOH A 131 291 291 HOH HOH . 
N 3 HOH A 132 292 292 HOH HOH . 
N 3 HOH A 133 293 293 HOH HOH . 
N 3 HOH A 134 294 294 HOH HOH . 
N 3 HOH A 135 295 295 HOH HOH . 
N 3 HOH A 136 296 296 HOH HOH . 
N 3 HOH A 137 297 297 HOH HOH . 
N 3 HOH A 138 298 298 HOH HOH . 
N 3 HOH A 139 299 299 HOH HOH . 
N 3 HOH A 140 300 300 HOH HOH . 
N 3 HOH A 141 301 301 HOH HOH . 
N 3 HOH A 142 302 302 HOH HOH . 
N 3 HOH A 143 303 303 HOH HOH . 
N 3 HOH A 144 304 304 HOH HOH . 
N 3 HOH A 145 305 305 HOH HOH . 
N 3 HOH A 146 306 306 HOH HOH . 
N 3 HOH A 147 307 307 HOH HOH . 
N 3 HOH A 148 308 308 HOH HOH . 
N 3 HOH A 149 309 309 HOH HOH . 
N 3 HOH A 150 310 310 HOH HOH . 
N 3 HOH A 151 311 311 HOH HOH . 
N 3 HOH A 152 312 312 HOH HOH . 
N 3 HOH A 153 313 313 HOH HOH . 
N 3 HOH A 154 314 314 HOH HOH . 
N 3 HOH A 155 315 315 HOH HOH . 
N 3 HOH A 156 316 316 HOH HOH . 
N 3 HOH A 157 317 317 HOH HOH . 
N 3 HOH A 158 318 318 HOH HOH . 
N 3 HOH A 159 319 319 HOH HOH . 
N 3 HOH A 160 320 320 HOH HOH . 
N 3 HOH A 161 321 321 HOH HOH . 
N 3 HOH A 162 322 322 HOH HOH . 
N 3 HOH A 163 323 323 HOH HOH . 
N 3 HOH A 164 324 324 HOH HOH . 
N 3 HOH A 165 325 325 HOH HOH . 
N 3 HOH A 166 326 326 HOH HOH . 
N 3 HOH A 167 327 327 HOH HOH . 
N 3 HOH A 168 328 328 HOH HOH . 
N 3 HOH A 169 329 329 HOH HOH . 
N 3 HOH A 170 330 330 HOH HOH . 
N 3 HOH A 171 331 331 HOH HOH . 
N 3 HOH A 172 332 332 HOH HOH . 
N 3 HOH A 173 333 333 HOH HOH . 
N 3 HOH A 174 334 334 HOH HOH . 
N 3 HOH A 175 335 335 HOH HOH . 
N 3 HOH A 176 336 336 HOH HOH . 
N 3 HOH A 177 337 337 HOH HOH . 
N 3 HOH A 178 338 338 HOH HOH . 
N 3 HOH A 179 339 339 HOH HOH . 
N 3 HOH A 180 340 340 HOH HOH . 
N 3 HOH A 181 341 341 HOH HOH . 
N 3 HOH A 182 342 342 HOH HOH . 
N 3 HOH A 183 343 343 HOH HOH . 
N 3 HOH A 184 344 344 HOH HOH . 
N 3 HOH A 185 345 345 HOH HOH . 
N 3 HOH A 186 346 346 HOH HOH . 
N 3 HOH A 187 347 347 HOH HOH . 
N 3 HOH A 188 348 348 HOH HOH . 
N 3 HOH A 189 349 349 HOH HOH . 
N 3 HOH A 190 350 350 HOH HOH . 
N 3 HOH A 191 351 351 HOH HOH . 
N 3 HOH A 192 352 352 HOH HOH . 
N 3 HOH A 193 353 353 HOH HOH . 
N 3 HOH A 194 354 354 HOH HOH . 
N 3 HOH A 195 355 355 HOH HOH . 
N 3 HOH A 196 356 356 HOH HOH . 
N 3 HOH A 197 357 357 HOH HOH . 
N 3 HOH A 198 358 358 HOH HOH . 
N 3 HOH A 199 359 359 HOH HOH . 
N 3 HOH A 200 360 360 HOH HOH . 
N 3 HOH A 201 361 361 HOH HOH . 
N 3 HOH A 202 362 362 HOH HOH . 
N 3 HOH A 203 363 363 HOH HOH . 
N 3 HOH A 204 364 364 HOH HOH . 
N 3 HOH A 205 365 365 HOH HOH . 
N 3 HOH A 206 366 366 HOH HOH . 
N 3 HOH A 207 367 367 HOH HOH . 
N 3 HOH A 208 368 368 HOH HOH . 
N 3 HOH A 209 369 369 HOH HOH . 
N 3 HOH A 210 370 370 HOH HOH . 
N 3 HOH A 211 371 371 HOH HOH . 
N 3 HOH A 212 372 372 HOH HOH . 
N 3 HOH A 213 373 373 HOH HOH . 
N 3 HOH A 214 374 374 HOH HOH . 
N 3 HOH A 215 375 375 HOH HOH . 
N 3 HOH A 216 376 376 HOH HOH . 
N 3 HOH A 217 377 377 HOH HOH . 
N 3 HOH A 218 378 378 HOH HOH . 
N 3 HOH A 219 379 379 HOH HOH . 
N 3 HOH A 220 380 380 HOH HOH . 
N 3 HOH A 221 381 381 HOH HOH . 
N 3 HOH A 222 382 382 HOH HOH . 
N 3 HOH A 223 383 383 HOH HOH . 
N 3 HOH A 224 384 384 HOH HOH . 
N 3 HOH A 225 385 385 HOH HOH . 
N 3 HOH A 226 386 386 HOH HOH . 
N 3 HOH A 227 387 387 HOH HOH . 
N 3 HOH A 228 388 388 HOH HOH . 
N 3 HOH A 229 389 389 HOH HOH . 
N 3 HOH A 230 390 390 HOH HOH . 
N 3 HOH A 231 391 391 HOH HOH . 
N 3 HOH A 232 392 392 HOH HOH . 
N 3 HOH A 233 393 393 HOH HOH . 
N 3 HOH A 234 394 394 HOH HOH . 
N 3 HOH A 235 395 395 HOH HOH . 
N 3 HOH A 236 396 396 HOH HOH . 
N 3 HOH A 237 397 397 HOH HOH . 
N 3 HOH A 238 398 398 HOH HOH . 
N 3 HOH A 239 399 399 HOH HOH . 
N 3 HOH A 240 400 400 HOH HOH . 
N 3 HOH A 241 401 401 HOH HOH . 
N 3 HOH A 242 402 402 HOH HOH . 
N 3 HOH A 243 403 403 HOH HOH . 
N 3 HOH A 244 404 404 HOH HOH . 
N 3 HOH A 245 405 405 HOH HOH . 
N 3 HOH A 246 406 406 HOH HOH . 
N 3 HOH A 247 407 407 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . C 2 15.96 4.029 12.712 1 25.37 ? C FMT 409 A 1 
HETATM 2 O O1 FMT . . . C 2 16.15 3.122 11.942 1 26.23 ? O1 FMT 409 A 1 
HETATM 3 O O2 FMT . . . C 2 16.144 5.293 12.31 1 27.1 ? O2 FMT 409 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           422 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           3 
#