data_3GKT # _model_server_result.job_id bTAzgDelpGnuxldxvn7t6g _model_server_result.datetime_utc '2024-11-13 07:05:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gkt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":154}' # _entry.id 3GKT # _exptl.entry_id 3GKT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 83.798 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description KRYPTON _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3GKT _cell.length_a 88.8 _cell.length_b 88.8 _cell.length_c 113.5 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GKT _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 18_655 -x+4/3,-x+y+2/3,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 88.8 51.268704 75.666667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 67 A HIS 64 1_555 E FE HEM . A HEM 155 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.887 ? metalc ? metalc2 A NE2 HIS 67 A HIS 64 1_555 E FE HEM . A HEM 155 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.521 ? metalc ? metalc3 A NE2 HIS 99 A HIS 96 1_555 E FE HEM . A HEM 155 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.155 ? metalc ? metalc4 A NE2 HIS 99 A HIS 96 1_555 E FE HEM . A HEM 155 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula Kr _chem_comp.formula_weight 83.798 _chem_comp.id KR _chem_comp.mon_nstd_flag . _chem_comp.name KRYPTON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GKT _atom_sites.fract_transf_matrix[1][1] 0.011261 _atom_sites.fract_transf_matrix[1][2] 0.006502 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 152 1 SO4 SO4 . C 3 KR A 1 153 1 KR KR . D 3 KR A 1 154 2 KR KR . E 4 HEM A 1 155 1 HEM HEM . F 5 HOH A 1 156 1 HOH HOH . F 5 HOH A 2 157 2 HOH HOH . F 5 HOH A 3 158 3 HOH HOH . F 5 HOH A 4 159 4 HOH HOH . F 5 HOH A 5 160 5 HOH HOH . F 5 HOH A 6 161 6 HOH HOH . F 5 HOH A 7 162 7 HOH HOH . F 5 HOH A 8 163 8 HOH HOH . F 5 HOH A 9 164 9 HOH HOH . F 5 HOH A 10 165 10 HOH HOH . F 5 HOH A 11 166 11 HOH HOH . F 5 HOH A 12 167 12 HOH HOH . F 5 HOH A 13 168 13 HOH HOH . F 5 HOH A 14 169 14 HOH HOH . F 5 HOH A 15 170 15 HOH HOH . F 5 HOH A 16 171 16 HOH HOH . F 5 HOH A 17 172 17 HOH HOH . F 5 HOH A 18 173 18 HOH HOH . F 5 HOH A 19 174 19 HOH HOH . F 5 HOH A 20 175 20 HOH HOH . F 5 HOH A 21 176 21 HOH HOH . F 5 HOH A 22 177 22 HOH HOH . F 5 HOH A 23 178 23 HOH HOH . F 5 HOH A 24 179 24 HOH HOH . F 5 HOH A 25 180 25 HOH HOH . F 5 HOH A 26 181 26 HOH HOH . F 5 HOH A 27 182 27 HOH HOH . F 5 HOH A 28 183 28 HOH HOH . F 5 HOH A 29 184 29 HOH HOH . F 5 HOH A 30 185 30 HOH HOH . F 5 HOH A 31 186 31 HOH HOH . F 5 HOH A 32 187 32 HOH HOH . F 5 HOH A 33 188 33 HOH HOH . F 5 HOH A 34 189 34 HOH HOH . F 5 HOH A 35 190 35 HOH HOH . F 5 HOH A 36 191 36 HOH HOH . F 5 HOH A 37 192 37 HOH HOH . F 5 HOH A 38 193 38 HOH HOH . F 5 HOH A 39 194 39 HOH HOH . F 5 HOH A 40 195 40 HOH HOH . F 5 HOH A 41 196 41 HOH HOH . F 5 HOH A 42 197 42 HOH HOH . F 5 HOH A 43 198 43 HOH HOH . F 5 HOH A 44 199 44 HOH HOH . F 5 HOH A 45 200 45 HOH HOH . F 5 HOH A 46 201 46 HOH HOH . F 5 HOH A 47 202 47 HOH HOH . F 5 HOH A 48 203 48 HOH HOH . F 5 HOH A 49 204 49 HOH HOH . F 5 HOH A 50 205 50 HOH HOH . F 5 HOH A 51 206 51 HOH HOH . F 5 HOH A 52 207 52 HOH HOH . F 5 HOH A 53 208 53 HOH HOH . F 5 HOH A 54 209 54 HOH HOH . F 5 HOH A 55 210 55 HOH HOH . F 5 HOH A 56 211 56 HOH HOH . F 5 HOH A 57 212 57 HOH HOH . F 5 HOH A 58 213 58 HOH HOH . F 5 HOH A 59 214 59 HOH HOH . F 5 HOH A 60 215 60 HOH HOH . F 5 HOH A 61 216 61 HOH HOH . F 5 HOH A 62 217 62 HOH HOH . F 5 HOH A 63 218 63 HOH HOH . F 5 HOH A 64 219 64 HOH HOH . F 5 HOH A 65 220 65 HOH HOH . F 5 HOH A 66 221 66 HOH HOH . F 5 HOH A 67 222 67 HOH HOH . F 5 HOH A 68 223 68 HOH HOH . F 5 HOH A 69 224 69 HOH HOH . F 5 HOH A 70 225 70 HOH HOH . F 5 HOH A 71 226 71 HOH HOH . F 5 HOH A 72 227 72 HOH HOH . F 5 HOH A 73 228 73 HOH HOH . F 5 HOH A 74 229 74 HOH HOH . F 5 HOH A 75 230 75 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol KR _atom_site.label_atom_id KR _atom_site.label_comp_id KR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.73 _atom_site.Cartn_y 53.48 _atom_site.Cartn_z 23.317 _atom_site.occupancy 0.32 _atom_site.B_iso_or_equiv 41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id KR _atom_site.auth_comp_id KR _atom_site.auth_seq_id 154 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #