data_3GLS
#
_model_server_result.job_id            -l1v0ROwmMg3dx4q4yeSQQ 
_model_server_result.datetime_utc      '2024-11-05 21:26:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gls 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":400}' 
#
_entry.id    3GLS 
#
_exptl.entry_id    3GLS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.1 
_cell.angle_gamma         90 
_cell.entry_id            3GLS 
_cell.length_a            85.371 
_cell.length_b            143.935 
_cell.length_c            91.657 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GLS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
PISA monomeric 1 author_and_software_defined_assembly 5 
PISA monomeric 1 author_and_software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,G,H,P 1 1 
B,I,Q 2 1 
C,J,R 3 1 
D,K,S 4 1 
E,L,M,T 5 1 
F,N,O,U 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G ZN ZN . A ZN 2 1_555 A SG CYS 142 A CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc2 G ZN ZN . A ZN 2 1_555 A SG CYS 145 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc3 G ZN ZN . A ZN 2 1_555 A SG CYS 166 A CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? 
metalc ? metalc4 G ZN ZN . A ZN 2 1_555 A SG CYS 169 A CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
metalc ? metalc5 I ZN ZN . B ZN 4 1_555 B SG CYS 142 B CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc6 I ZN ZN . B ZN 4 1_555 B SG CYS 145 B CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc7 I ZN ZN . B ZN 4 1_555 B SG CYS 166 B CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc8 I ZN ZN . B ZN 4 1_555 B SG CYS 169 B CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc9 J ZN ZN . C ZN 5 1_555 C SG CYS 142 C CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc10 J ZN ZN . C ZN 5 1_555 C SG CYS 145 C CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc11 J ZN ZN . C ZN 5 1_555 C SG CYS 166 C CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc12 J ZN ZN . C ZN 5 1_555 C SG CYS 169 C CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc13 K ZN ZN . D ZN 6 1_555 D SG CYS 142 D CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? 
metalc ? metalc14 K ZN ZN . D ZN 6 1_555 D SG CYS 145 D CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? 
metalc ? metalc15 K ZN ZN . D ZN 6 1_555 D SG CYS 166 D CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc16 K ZN ZN . D ZN 6 1_555 D SG CYS 169 D CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc17 L ZN ZN . E ZN 1 1_555 E SG CYS 142 E CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc18 L ZN ZN . E ZN 1 1_555 E SG CYS 145 E CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc19 L ZN ZN . E ZN 1 1_555 E SG CYS 166 E CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
metalc ? metalc20 L ZN ZN . E ZN 1 1_555 E SG CYS 169 E CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc21 N ZN ZN . F ZN 3 1_555 F SG CYS 142 F CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc22 N ZN ZN . F ZN 3 1_555 F SG CYS 145 F CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc23 N ZN ZN . F ZN 3 1_555 F SG CYS 166 F CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc24 N ZN ZN . F ZN 3 1_555 F SG CYS 169 F CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PGE sing 237 n n 
C1 C2 PGE sing 238 n n 
C1 H1 PGE sing 239 n n 
C1 H12 PGE sing 240 n n 
O1 HO1 PGE sing 241 n n 
C2 O2 PGE sing 242 n n 
C2 H2 PGE sing 243 n n 
C2 H22 PGE sing 244 n n 
O2 C3 PGE sing 245 n n 
C3 C4 PGE sing 246 n n 
C3 H3 PGE sing 247 n n 
C3 H32 PGE sing 248 n n 
C4 O3 PGE sing 249 n n 
C4 H4 PGE sing 250 n n 
C4 H42 PGE sing 251 n n 
O4 C6 PGE sing 252 n n 
O4 HO4 PGE sing 253 n n 
C6 C5 PGE sing 254 n n 
C6 H6 PGE sing 255 n n 
C6 H62 PGE sing 256 n n 
C5 O3 PGE sing 257 n n 
C5 H5 PGE sing 258 n n 
C5 H52 PGE sing 259 n n 
#
_atom_sites.entry_id                     3GLS 
_atom_sites.fract_transf_matrix[1][1]    0.011714 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005993 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006948 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012255 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 ZN A 1 2 2 ZN ZN . 
H 3 PGE A 1 400 2 PGE PGE . 
I 2 ZN B 1 4 4 ZN ZN . 
J 2 ZN C 1 5 5 ZN ZN . 
K 2 ZN D 1 6 6 ZN ZN . 
L 2 ZN E 1 1 1 ZN ZN . 
M 4 SO4 E 1 400 1 SO4 SO4 . 
N 2 ZN F 1 3 3 ZN ZN . 
O 3 PGE F 1 400 3 PGE PGE . 
P 5 HOH A 1 19 19 HOH HOH . 
P 5 HOH A 2 23 23 HOH HOH . 
P 5 HOH A 3 28 28 HOH HOH . 
P 5 HOH A 4 34 34 HOH HOH . 
P 5 HOH A 5 40 40 HOH HOH . 
P 5 HOH A 6 41 41 HOH HOH . 
P 5 HOH A 7 62 62 HOH HOH . 
P 5 HOH A 8 65 65 HOH HOH . 
P 5 HOH A 9 80 80 HOH HOH . 
P 5 HOH A 10 88 88 HOH HOH . 
P 5 HOH A 11 92 92 HOH HOH . 
P 5 HOH A 12 95 95 HOH HOH . 
P 5 HOH A 13 401 116 HOH HOH . 
P 5 HOH A 14 402 126 HOH HOH . 
P 5 HOH A 15 403 129 HOH HOH . 
P 5 HOH A 16 404 169 HOH HOH . 
Q 5 HOH B 1 24 24 HOH HOH . 
Q 5 HOH B 2 25 25 HOH HOH . 
Q 5 HOH B 3 29 29 HOH HOH . 
Q 5 HOH B 4 46 46 HOH HOH . 
Q 5 HOH B 5 63 63 HOH HOH . 
Q 5 HOH B 6 64 64 HOH HOH . 
Q 5 HOH B 7 75 75 HOH HOH . 
Q 5 HOH B 8 84 84 HOH HOH . 
Q 5 HOH B 9 91 91 HOH HOH . 
Q 5 HOH B 10 98 98 HOH HOH . 
Q 5 HOH B 11 109 109 HOH HOH . 
Q 5 HOH B 12 111 111 HOH HOH . 
Q 5 HOH B 13 400 127 HOH HOH . 
Q 5 HOH B 14 401 130 HOH HOH . 
Q 5 HOH B 15 402 133 HOH HOH . 
Q 5 HOH B 16 403 178 HOH HOH . 
Q 5 HOH B 17 404 187 HOH HOH . 
R 5 HOH C 1 8 8 HOH HOH . 
R 5 HOH C 2 20 20 HOH HOH . 
R 5 HOH C 3 27 27 HOH HOH . 
R 5 HOH C 4 36 36 HOH HOH . 
R 5 HOH C 5 38 38 HOH HOH . 
R 5 HOH C 6 39 39 HOH HOH . 
R 5 HOH C 7 43 43 HOH HOH . 
R 5 HOH C 8 49 49 HOH HOH . 
R 5 HOH C 9 58 58 HOH HOH . 
R 5 HOH C 10 67 67 HOH HOH . 
R 5 HOH C 11 69 69 HOH HOH . 
R 5 HOH C 12 86 86 HOH HOH . 
R 5 HOH C 13 102 102 HOH HOH . 
R 5 HOH C 14 104 104 HOH HOH . 
R 5 HOH C 15 107 107 HOH HOH . 
R 5 HOH C 16 400 141 HOH HOH . 
R 5 HOH C 17 401 146 HOH HOH . 
R 5 HOH C 18 402 155 HOH HOH . 
R 5 HOH C 19 403 170 HOH HOH . 
R 5 HOH C 20 404 173 HOH HOH . 
R 5 HOH C 21 405 177 HOH HOH . 
R 5 HOH C 22 406 181 HOH HOH . 
S 5 HOH D 1 18 18 HOH HOH . 
S 5 HOH D 2 48 48 HOH HOH . 
S 5 HOH D 3 51 51 HOH HOH . 
S 5 HOH D 4 53 53 HOH HOH . 
S 5 HOH D 5 56 56 HOH HOH . 
S 5 HOH D 6 59 59 HOH HOH . 
S 5 HOH D 7 70 70 HOH HOH . 
S 5 HOH D 8 82 82 HOH HOH . 
S 5 HOH D 9 83 83 HOH HOH . 
S 5 HOH D 10 85 85 HOH HOH . 
S 5 HOH D 11 96 96 HOH HOH . 
S 5 HOH D 12 112 112 HOH HOH . 
S 5 HOH D 13 400 128 HOH HOH . 
S 5 HOH D 14 401 142 HOH HOH . 
S 5 HOH D 15 402 143 HOH HOH . 
S 5 HOH D 16 403 148 HOH HOH . 
S 5 HOH D 17 404 171 HOH HOH . 
S 5 HOH D 18 405 174 HOH HOH . 
S 5 HOH D 19 406 183 HOH HOH . 
T 5 HOH E 1 3 3 HOH HOH . 
T 5 HOH E 2 11 11 HOH HOH . 
T 5 HOH E 3 16 16 HOH HOH . 
T 5 HOH E 4 17 17 HOH HOH . 
T 5 HOH E 5 22 22 HOH HOH . 
T 5 HOH E 6 37 37 HOH HOH . 
T 5 HOH E 7 44 44 HOH HOH . 
T 5 HOH E 8 47 47 HOH HOH . 
T 5 HOH E 9 57 57 HOH HOH . 
T 5 HOH E 10 76 76 HOH HOH . 
T 5 HOH E 11 81 81 HOH HOH . 
T 5 HOH E 12 90 90 HOH HOH . 
T 5 HOH E 13 103 103 HOH HOH . 
T 5 HOH E 14 108 108 HOH HOH . 
T 5 HOH E 15 401 134 HOH HOH . 
T 5 HOH E 16 402 139 HOH HOH . 
T 5 HOH E 17 403 162 HOH HOH . 
T 5 HOH E 18 404 172 HOH HOH . 
T 5 HOH E 19 405 185 HOH HOH . 
U 5 HOH F 1 4 4 HOH HOH . 
U 5 HOH F 2 5 5 HOH HOH . 
U 5 HOH F 3 6 6 HOH HOH . 
U 5 HOH F 4 7 7 HOH HOH . 
U 5 HOH F 5 14 14 HOH HOH . 
U 5 HOH F 6 32 32 HOH HOH . 
U 5 HOH F 7 35 35 HOH HOH . 
U 5 HOH F 8 52 52 HOH HOH . 
U 5 HOH F 9 61 61 HOH HOH . 
U 5 HOH F 10 68 68 HOH HOH . 
U 5 HOH F 11 72 72 HOH HOH . 
U 5 HOH F 12 79 79 HOH HOH . 
U 5 HOH F 13 97 97 HOH HOH . 
U 5 HOH F 14 99 99 HOH HOH . 
U 5 HOH F 15 100 100 HOH HOH . 
U 5 HOH F 16 105 105 HOH HOH . 
U 5 HOH F 17 106 106 HOH HOH . 
U 5 HOH F 18 401 122 HOH HOH . 
U 5 HOH F 19 402 124 HOH HOH . 
U 5 HOH F 20 403 145 HOH HOH . 
U 5 HOH F 21 404 149 HOH HOH . 
U 5 HOH F 22 405 150 HOH HOH . 
U 5 HOH F 23 406 151 HOH HOH . 
U 5 HOH F 24 407 156 HOH HOH . 
U 5 HOH F 25 408 179 HOH HOH . 
U 5 HOH F 26 409 186 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2 PGE . . . O 3 -73.887 -42.141 25.589 1 19.33 ? O2 PGE 400 F 1 
HETATM 2 C C3 PGE . . . O 3 -72.708 -42.175 26.367 1 21.31 ? C3 PGE 400 F 1 
HETATM 3 C C4 PGE . . . O 3 -71.86 -43.34 25.905 1 20.44 ? C4 PGE 400 F 1 
HETATM 4 O O4 PGE . . . O 3 -70.977 -46.741 29.119 1 22.12 ? O4 PGE 400 F 1 
HETATM 5 C C6 PGE . . . O 3 -70.321 -45.691 28.364 1 22.3 ? C6 PGE 400 F 1 
HETATM 6 C C5 PGE . . . O 3 -71.011 -45.288 27.078 1 21.67 ? C5 PGE 400 F 1 
HETATM 7 O O3 PGE . . . O 3 -70.926 -43.85 26.921 1 22.75 ? O3 PGE 400 F 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#