data_3GLZ # _model_server_result.job_id IEeKxNWx5CutIXCmCiDzWQ _model_server_result.datetime_utc '2024-11-28 02:02:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3glz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3GLZ # _exptl.entry_id 3GLZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 261.197 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[({(1E)-[2-(trifluoromethyl)phenyl]methylidene}amino)oxy]propanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GLZ _cell.length_a 42.181 _cell.length_b 84.939 _cell.length_c 63.422 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 42.181 84.939 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C11 H10 F3 N O3' _chem_comp.formula_weight 261.197 _chem_comp.id 1BD _chem_comp.mon_nstd_flag . _chem_comp.name '3-[({(1E)-[2-(trifluoromethyl)phenyl]methylidene}amino)oxy]propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(E)-3-(2-(trifluoromethyl)benzylideneaminooxy)propanoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 1BD doub 1 n y C1 C6 1BD sing 2 n y C1 H1 1BD sing 3 n n C3 C2 1BD sing 4 n y C2 H2 1BD sing 5 n n C7 C3 1BD sing 6 n n C3 C4 1BD doub 7 n y C15 C4 1BD sing 8 n n C4 C5 1BD sing 9 n y C5 C6 1BD doub 10 n y C5 H5 1BD sing 11 n n C6 H6 1BD sing 12 n n N8 C7 1BD doub 13 e n C7 H7 1BD sing 14 n n O9 N8 1BD sing 15 n n C10 O9 1BD sing 16 n n C11 C10 1BD sing 17 n n C10 H10 1BD sing 18 n n C10 H10A 1BD sing 19 n n C12 C11 1BD sing 20 n n C11 H11 1BD sing 21 n n C11 H11A 1BD sing 22 n n O13 C12 1BD doub 23 n n O14 C12 1BD sing 24 n n O14 HO14 1BD sing 25 n n F16 C15 1BD sing 26 n n F18 C15 1BD sing 27 n n C15 F17 1BD sing 28 n n # _atom_sites.entry_id 3GLZ _atom_sites.fract_transf_matrix[1][1] 0.023707 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011773 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015767 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1BD A 1 500 500 1BD 1BD . D 2 1BD B 1 501 501 1BD 1BD . E 3 HOH A 1 128 128 HOH HOH . E 3 HOH A 2 129 129 HOH HOH . E 3 HOH A 3 130 130 HOH HOH . E 3 HOH A 4 131 131 HOH HOH . E 3 HOH A 5 132 132 HOH HOH . E 3 HOH A 6 133 133 HOH HOH . E 3 HOH A 7 134 134 HOH HOH . E 3 HOH A 8 135 135 HOH HOH . E 3 HOH A 9 136 136 HOH HOH . E 3 HOH A 10 137 137 HOH HOH . E 3 HOH A 11 138 138 HOH HOH . E 3 HOH A 12 139 139 HOH HOH . E 3 HOH A 13 140 140 HOH HOH . E 3 HOH A 14 141 141 HOH HOH . E 3 HOH A 15 142 142 HOH HOH . E 3 HOH A 16 143 143 HOH HOH . E 3 HOH A 17 144 144 HOH HOH . E 3 HOH A 18 145 145 HOH HOH . E 3 HOH A 19 146 146 HOH HOH . E 3 HOH A 20 147 147 HOH HOH . E 3 HOH A 21 148 148 HOH HOH . E 3 HOH A 22 149 149 HOH HOH . E 3 HOH A 23 150 150 HOH HOH . E 3 HOH A 24 151 151 HOH HOH . E 3 HOH A 25 152 152 HOH HOH . E 3 HOH A 26 153 153 HOH HOH . E 3 HOH A 27 154 154 HOH HOH . E 3 HOH A 28 155 155 HOH HOH . E 3 HOH A 29 156 156 HOH HOH . E 3 HOH A 30 157 157 HOH HOH . E 3 HOH A 31 158 158 HOH HOH . E 3 HOH A 32 159 159 HOH HOH . E 3 HOH A 33 160 160 HOH HOH . E 3 HOH A 34 161 161 HOH HOH . E 3 HOH A 35 162 162 HOH HOH . E 3 HOH A 36 163 163 HOH HOH . E 3 HOH A 37 164 164 HOH HOH . E 3 HOH A 38 165 165 HOH HOH . E 3 HOH A 39 166 166 HOH HOH . E 3 HOH A 40 167 167 HOH HOH . E 3 HOH A 41 168 168 HOH HOH . E 3 HOH A 42 169 169 HOH HOH . E 3 HOH A 43 170 170 HOH HOH . E 3 HOH A 44 171 171 HOH HOH . E 3 HOH A 45 172 172 HOH HOH . E 3 HOH A 46 173 173 HOH HOH . E 3 HOH A 47 174 174 HOH HOH . E 3 HOH A 48 175 175 HOH HOH . E 3 HOH A 49 176 176 HOH HOH . E 3 HOH A 50 177 177 HOH HOH . E 3 HOH A 51 178 178 HOH HOH . E 3 HOH A 52 179 179 HOH HOH . E 3 HOH A 53 180 180 HOH HOH . E 3 HOH A 54 181 181 HOH HOH . E 3 HOH A 55 182 182 HOH HOH . E 3 HOH A 56 183 183 HOH HOH . E 3 HOH A 57 184 184 HOH HOH . E 3 HOH A 58 185 185 HOH HOH . E 3 HOH A 59 186 186 HOH HOH . E 3 HOH A 60 187 187 HOH HOH . E 3 HOH A 61 188 188 HOH HOH . E 3 HOH A 62 189 189 HOH HOH . E 3 HOH A 63 190 190 HOH HOH . E 3 HOH A 64 191 191 HOH HOH . E 3 HOH A 65 192 192 HOH HOH . E 3 HOH A 66 193 193 HOH HOH . E 3 HOH A 67 194 194 HOH HOH . E 3 HOH A 68 195 195 HOH HOH . E 3 HOH A 69 196 196 HOH HOH . E 3 HOH A 70 197 197 HOH HOH . E 3 HOH A 71 198 198 HOH HOH . E 3 HOH A 72 199 199 HOH HOH . E 3 HOH A 73 200 200 HOH HOH . E 3 HOH A 74 201 201 HOH HOH . E 3 HOH A 75 202 202 HOH HOH . E 3 HOH A 76 203 203 HOH HOH . E 3 HOH A 77 204 204 HOH HOH . E 3 HOH A 78 205 205 HOH HOH . E 3 HOH A 79 206 206 HOH HOH . E 3 HOH A 80 207 207 HOH HOH . E 3 HOH A 81 208 208 HOH HOH . E 3 HOH A 82 209 209 HOH HOH . E 3 HOH A 83 210 210 HOH HOH . E 3 HOH A 84 211 211 HOH HOH . E 3 HOH A 85 212 212 HOH HOH . E 3 HOH A 86 213 213 HOH HOH . E 3 HOH A 87 214 214 HOH HOH . E 3 HOH A 88 215 215 HOH HOH . E 3 HOH A 89 216 216 HOH HOH . E 3 HOH A 90 217 217 HOH HOH . E 3 HOH A 91 218 218 HOH HOH . F 3 HOH B 1 128 128 HOH HOH . F 3 HOH B 2 129 129 HOH HOH . F 3 HOH B 3 130 130 HOH HOH . F 3 HOH B 4 131 131 HOH HOH . F 3 HOH B 5 132 132 HOH HOH . F 3 HOH B 6 133 133 HOH HOH . F 3 HOH B 7 134 134 HOH HOH . F 3 HOH B 8 135 135 HOH HOH . F 3 HOH B 9 136 136 HOH HOH . F 3 HOH B 10 137 137 HOH HOH . F 3 HOH B 11 138 138 HOH HOH . F 3 HOH B 12 139 139 HOH HOH . F 3 HOH B 13 140 140 HOH HOH . F 3 HOH B 14 141 141 HOH HOH . F 3 HOH B 15 142 142 HOH HOH . F 3 HOH B 16 143 143 HOH HOH . F 3 HOH B 17 144 144 HOH HOH . F 3 HOH B 18 145 145 HOH HOH . F 3 HOH B 19 146 146 HOH HOH . F 3 HOH B 20 147 147 HOH HOH . F 3 HOH B 21 148 148 HOH HOH . F 3 HOH B 22 149 149 HOH HOH . F 3 HOH B 23 150 150 HOH HOH . F 3 HOH B 24 151 151 HOH HOH . F 3 HOH B 25 152 152 HOH HOH . F 3 HOH B 26 153 153 HOH HOH . F 3 HOH B 27 154 154 HOH HOH . F 3 HOH B 28 155 155 HOH HOH . F 3 HOH B 29 156 156 HOH HOH . F 3 HOH B 30 157 157 HOH HOH . F 3 HOH B 31 158 158 HOH HOH . F 3 HOH B 32 159 159 HOH HOH . F 3 HOH B 33 160 160 HOH HOH . F 3 HOH B 34 161 161 HOH HOH . F 3 HOH B 35 162 162 HOH HOH . F 3 HOH B 36 163 163 HOH HOH . F 3 HOH B 37 164 164 HOH HOH . F 3 HOH B 38 165 165 HOH HOH . F 3 HOH B 39 166 166 HOH HOH . F 3 HOH B 40 167 167 HOH HOH . F 3 HOH B 41 168 168 HOH HOH . F 3 HOH B 42 169 169 HOH HOH . F 3 HOH B 43 170 170 HOH HOH . F 3 HOH B 44 171 171 HOH HOH . F 3 HOH B 45 172 172 HOH HOH . F 3 HOH B 46 173 173 HOH HOH . F 3 HOH B 47 174 174 HOH HOH . F 3 HOH B 48 175 175 HOH HOH . F 3 HOH B 49 176 176 HOH HOH . F 3 HOH B 50 177 177 HOH HOH . F 3 HOH B 51 178 178 HOH HOH . F 3 HOH B 52 179 179 HOH HOH . F 3 HOH B 53 180 180 HOH HOH . F 3 HOH B 54 181 181 HOH HOH . F 3 HOH B 55 182 101 HOH HOH . F 3 HOH B 56 183 183 HOH HOH . F 3 HOH B 57 184 184 HOH HOH . F 3 HOH B 58 185 185 HOH HOH . F 3 HOH B 59 186 186 HOH HOH . F 3 HOH B 60 188 188 HOH HOH . F 3 HOH B 61 190 190 HOH HOH . F 3 HOH B 62 191 191 HOH HOH . F 3 HOH B 63 193 193 HOH HOH . F 3 HOH B 64 199 199 HOH HOH . F 3 HOH B 65 201 201 HOH HOH . F 3 HOH B 66 202 202 HOH HOH . F 3 HOH B 67 203 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1BD . . . D 2 21.097 40.045 21.747 0.5 17.88 ? C1 1BD 501 B 1 HETATM 2 C C2 1BD . . . D 2 21.066 40.683 22.983 0.5 24.51 ? C2 1BD 501 B 1 HETATM 3 C C3 1BD . . . D 2 21.076 42.094 23.093 0.5 27.21 ? C3 1BD 501 B 1 HETATM 4 C C4 1BD . . . D 2 21.115 42.891 21.899 0.5 26.39 ? C4 1BD 501 B 1 HETATM 5 C C5 1BD . . . D 2 21.153 42.225 20.668 0.5 25.6 ? C5 1BD 501 B 1 HETATM 6 C C6 1BD . . . D 2 21.143 40.824 20.577 0.5 23.36 ? C6 1BD 501 B 1 HETATM 7 C C7 1BD . . . D 2 21.058 42.73 24.475 0.5 31.63 ? C7 1BD 501 B 1 HETATM 8 N N8 1BD . . . D 2 20.976 42.025 25.529 0.5 35.27 ? N8 1BD 501 B 1 HETATM 9 O O9 1BD . . . D 2 20.896 42.545 26.727 0.5 37.04 ? O9 1BD 501 B 1 HETATM 10 C C10 1BD . . . D 2 21.112 41.779 27.904 0.5 36.67 ? C10 1BD 501 B 1 HETATM 11 C C11 1BD . . . D 2 22.432 42.165 28.616 0.5 37.64 ? C11 1BD 501 B 1 HETATM 12 C C12 1BD . . . D 2 22.928 40.969 29.398 0.5 37.71 ? C12 1BD 501 B 1 HETATM 13 O O13 1BD . . . D 2 24.235 40.702 29.14 0.5 38.29 ? O13 1BD 501 B 1 HETATM 14 O O14 1BD . . . D 2 22.261 40.339 30.18 0.5 38.89 ? O14 1BD 501 B 1 HETATM 15 C C15 1BD . . . D 2 21.12 44.437 21.94 0.5 23.8 ? C15 1BD 501 B 1 HETATM 16 F F16 1BD . . . D 2 20.488 44.879 23.079 0.5 32.52 ? F16 1BD 501 B 1 HETATM 17 F F17 1BD . . . D 2 20.496 44.992 20.853 0.5 18.7 ? F17 1BD 501 B 1 HETATM 18 F F18 1BD . . . D 2 22.382 44.895 21.932 0.5 32.9 ? F18 1BD 501 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #