data_3GM8
#
_model_server_result.job_id            pVF5KTIzBE48aDe1edKOKA 
_model_server_result.datetime_utc      '2024-12-02 03:10:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gm8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2}' 
#
_entry.id    3GM8 
#
_exptl.entry_id    3GM8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3GM8 
_cell.length_a            62.754 
_cell.length_b            193.348 
_cell.length_c            190.667 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GM8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3GM8 
_atom_sites.fract_transf_matrix[1][1]    0.015935 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005172 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 1 1 GOL GOL . 
C 2 GOL A 1 2 2 GOL GOL . 
D 3 HOH A 1 3 3 HOH HOH . 
D 3 HOH A 2 4 4 HOH HOH . 
D 3 HOH A 3 5 5 HOH HOH . 
D 3 HOH A 4 6 6 HOH HOH . 
D 3 HOH A 5 7 7 HOH HOH . 
D 3 HOH A 6 8 8 HOH HOH . 
D 3 HOH A 7 9 9 HOH HOH . 
D 3 HOH A 8 10 10 HOH HOH . 
D 3 HOH A 9 11 11 HOH HOH . 
D 3 HOH A 10 12 12 HOH HOH . 
D 3 HOH A 11 13 13 HOH HOH . 
D 3 HOH A 12 14 14 HOH HOH . 
D 3 HOH A 13 15 15 HOH HOH . 
D 3 HOH A 14 16 16 HOH HOH . 
D 3 HOH A 15 818 1 HOH HOH . 
D 3 HOH A 16 819 2 HOH HOH . 
D 3 HOH A 17 820 17 HOH HOH . 
D 3 HOH A 18 821 18 HOH HOH . 
D 3 HOH A 19 822 19 HOH HOH . 
D 3 HOH A 20 823 20 HOH HOH . 
D 3 HOH A 21 824 21 HOH HOH . 
D 3 HOH A 22 825 22 HOH HOH . 
D 3 HOH A 23 826 23 HOH HOH . 
D 3 HOH A 24 827 24 HOH HOH . 
D 3 HOH A 25 828 25 HOH HOH . 
D 3 HOH A 26 829 26 HOH HOH . 
D 3 HOH A 27 830 27 HOH HOH . 
D 3 HOH A 28 831 28 HOH HOH . 
D 3 HOH A 29 832 29 HOH HOH . 
D 3 HOH A 30 833 31 HOH HOH . 
D 3 HOH A 31 834 32 HOH HOH . 
D 3 HOH A 32 835 33 HOH HOH . 
D 3 HOH A 33 836 34 HOH HOH . 
D 3 HOH A 34 837 35 HOH HOH . 
D 3 HOH A 35 838 36 HOH HOH . 
D 3 HOH A 36 839 37 HOH HOH . 
D 3 HOH A 37 840 38 HOH HOH . 
D 3 HOH A 38 841 39 HOH HOH . 
D 3 HOH A 39 842 40 HOH HOH . 
D 3 HOH A 40 843 41 HOH HOH . 
D 3 HOH A 41 844 42 HOH HOH . 
D 3 HOH A 42 845 45 HOH HOH . 
D 3 HOH A 43 846 46 HOH HOH . 
D 3 HOH A 44 847 48 HOH HOH . 
D 3 HOH A 45 848 49 HOH HOH . 
D 3 HOH A 46 849 50 HOH HOH . 
D 3 HOH A 47 850 51 HOH HOH . 
D 3 HOH A 48 851 52 HOH HOH . 
D 3 HOH A 49 852 53 HOH HOH . 
D 3 HOH A 50 853 54 HOH HOH . 
D 3 HOH A 51 854 55 HOH HOH . 
D 3 HOH A 52 855 56 HOH HOH . 
D 3 HOH A 53 856 57 HOH HOH . 
D 3 HOH A 54 857 58 HOH HOH . 
D 3 HOH A 55 858 59 HOH HOH . 
D 3 HOH A 56 859 60 HOH HOH . 
D 3 HOH A 57 860 61 HOH HOH . 
D 3 HOH A 58 861 62 HOH HOH . 
D 3 HOH A 59 862 63 HOH HOH . 
D 3 HOH A 60 863 64 HOH HOH . 
D 3 HOH A 61 864 65 HOH HOH . 
D 3 HOH A 62 865 66 HOH HOH . 
D 3 HOH A 63 866 67 HOH HOH . 
D 3 HOH A 64 867 68 HOH HOH . 
D 3 HOH A 65 868 69 HOH HOH . 
D 3 HOH A 66 869 70 HOH HOH . 
D 3 HOH A 67 870 71 HOH HOH . 
D 3 HOH A 68 871 73 HOH HOH . 
D 3 HOH A 69 872 75 HOH HOH . 
D 3 HOH A 70 873 76 HOH HOH . 
D 3 HOH A 71 874 78 HOH HOH . 
D 3 HOH A 72 875 80 HOH HOH . 
D 3 HOH A 73 876 81 HOH HOH . 
D 3 HOH A 74 877 82 HOH HOH . 
D 3 HOH A 75 878 83 HOH HOH . 
D 3 HOH A 76 879 84 HOH HOH . 
D 3 HOH A 77 880 85 HOH HOH . 
D 3 HOH A 78 881 86 HOH HOH . 
D 3 HOH A 79 882 87 HOH HOH . 
D 3 HOH A 80 883 88 HOH HOH . 
D 3 HOH A 81 884 89 HOH HOH . 
D 3 HOH A 82 885 90 HOH HOH . 
D 3 HOH A 83 886 91 HOH HOH . 
D 3 HOH A 84 887 92 HOH HOH . 
D 3 HOH A 85 888 93 HOH HOH . 
D 3 HOH A 86 889 94 HOH HOH . 
D 3 HOH A 87 890 95 HOH HOH . 
D 3 HOH A 88 891 96 HOH HOH . 
D 3 HOH A 89 892 97 HOH HOH . 
D 3 HOH A 90 893 98 HOH HOH . 
D 3 HOH A 91 894 99 HOH HOH . 
D 3 HOH A 92 895 100 HOH HOH . 
D 3 HOH A 93 896 103 HOH HOH . 
D 3 HOH A 94 897 104 HOH HOH . 
D 3 HOH A 95 898 106 HOH HOH . 
D 3 HOH A 96 899 107 HOH HOH . 
D 3 HOH A 97 900 108 HOH HOH . 
D 3 HOH A 98 901 109 HOH HOH . 
D 3 HOH A 99 902 110 HOH HOH . 
D 3 HOH A 100 903 111 HOH HOH . 
D 3 HOH A 101 904 112 HOH HOH . 
D 3 HOH A 102 905 113 HOH HOH . 
D 3 HOH A 103 906 114 HOH HOH . 
D 3 HOH A 104 907 115 HOH HOH . 
D 3 HOH A 105 908 116 HOH HOH . 
D 3 HOH A 106 909 117 HOH HOH . 
D 3 HOH A 107 910 118 HOH HOH . 
D 3 HOH A 108 911 119 HOH HOH . 
D 3 HOH A 109 912 120 HOH HOH . 
D 3 HOH A 110 913 121 HOH HOH . 
D 3 HOH A 111 914 122 HOH HOH . 
D 3 HOH A 112 915 124 HOH HOH . 
D 3 HOH A 113 916 125 HOH HOH . 
D 3 HOH A 114 917 126 HOH HOH . 
D 3 HOH A 115 918 128 HOH HOH . 
D 3 HOH A 116 919 129 HOH HOH . 
D 3 HOH A 117 920 130 HOH HOH . 
D 3 HOH A 118 921 131 HOH HOH . 
D 3 HOH A 119 922 132 HOH HOH . 
D 3 HOH A 120 923 133 HOH HOH . 
D 3 HOH A 121 924 134 HOH HOH . 
D 3 HOH A 122 925 135 HOH HOH . 
D 3 HOH A 123 926 136 HOH HOH . 
D 3 HOH A 124 927 138 HOH HOH . 
D 3 HOH A 125 928 139 HOH HOH . 
D 3 HOH A 126 929 141 HOH HOH . 
D 3 HOH A 127 930 143 HOH HOH . 
D 3 HOH A 128 931 146 HOH HOH . 
D 3 HOH A 129 932 148 HOH HOH . 
D 3 HOH A 130 933 149 HOH HOH . 
D 3 HOH A 131 934 150 HOH HOH . 
D 3 HOH A 132 935 152 HOH HOH . 
D 3 HOH A 133 936 154 HOH HOH . 
D 3 HOH A 134 937 155 HOH HOH . 
D 3 HOH A 135 938 156 HOH HOH . 
D 3 HOH A 136 939 158 HOH HOH . 
D 3 HOH A 137 940 161 HOH HOH . 
D 3 HOH A 138 941 162 HOH HOH . 
D 3 HOH A 139 942 164 HOH HOH . 
D 3 HOH A 140 943 165 HOH HOH . 
D 3 HOH A 141 944 167 HOH HOH . 
D 3 HOH A 142 945 169 HOH HOH . 
D 3 HOH A 143 946 174 HOH HOH . 
D 3 HOH A 144 947 176 HOH HOH . 
D 3 HOH A 145 948 177 HOH HOH . 
D 3 HOH A 146 949 178 HOH HOH . 
D 3 HOH A 147 950 179 HOH HOH . 
D 3 HOH A 148 951 181 HOH HOH . 
D 3 HOH A 149 952 182 HOH HOH . 
D 3 HOH A 150 953 183 HOH HOH . 
D 3 HOH A 151 954 190 HOH HOH . 
D 3 HOH A 152 955 194 HOH HOH . 
D 3 HOH A 153 956 196 HOH HOH . 
D 3 HOH A 154 957 197 HOH HOH . 
D 3 HOH A 155 958 200 HOH HOH . 
D 3 HOH A 156 959 205 HOH HOH . 
D 3 HOH A 157 960 207 HOH HOH . 
D 3 HOH A 158 961 208 HOH HOH . 
D 3 HOH A 159 962 209 HOH HOH . 
D 3 HOH A 160 963 211 HOH HOH . 
D 3 HOH A 161 964 214 HOH HOH . 
D 3 HOH A 162 965 218 HOH HOH . 
D 3 HOH A 163 966 219 HOH HOH . 
D 3 HOH A 164 967 221 HOH HOH . 
D 3 HOH A 165 968 222 HOH HOH . 
D 3 HOH A 166 969 229 HOH HOH . 
D 3 HOH A 167 970 230 HOH HOH . 
D 3 HOH A 168 971 231 HOH HOH . 
D 3 HOH A 169 972 232 HOH HOH . 
D 3 HOH A 170 973 233 HOH HOH . 
D 3 HOH A 171 974 235 HOH HOH . 
D 3 HOH A 172 975 240 HOH HOH . 
D 3 HOH A 173 976 241 HOH HOH . 
D 3 HOH A 174 977 245 HOH HOH . 
D 3 HOH A 175 978 246 HOH HOH . 
D 3 HOH A 176 979 247 HOH HOH . 
D 3 HOH A 177 980 250 HOH HOH . 
D 3 HOH A 178 981 253 HOH HOH . 
D 3 HOH A 179 982 254 HOH HOH . 
D 3 HOH A 180 983 256 HOH HOH . 
D 3 HOH A 181 984 257 HOH HOH . 
D 3 HOH A 182 985 260 HOH HOH . 
D 3 HOH A 183 986 261 HOH HOH . 
D 3 HOH A 184 987 262 HOH HOH . 
D 3 HOH A 185 988 265 HOH HOH . 
D 3 HOH A 186 989 269 HOH HOH . 
D 3 HOH A 187 990 270 HOH HOH . 
D 3 HOH A 188 991 271 HOH HOH . 
D 3 HOH A 189 992 272 HOH HOH . 
D 3 HOH A 190 993 273 HOH HOH . 
D 3 HOH A 191 994 276 HOH HOH . 
D 3 HOH A 192 995 279 HOH HOH . 
D 3 HOH A 193 996 284 HOH HOH . 
D 3 HOH A 194 997 285 HOH HOH . 
D 3 HOH A 195 998 295 HOH HOH . 
D 3 HOH A 196 999 296 HOH HOH . 
D 3 HOH A 197 1000 301 HOH HOH . 
D 3 HOH A 198 1001 305 HOH HOH . 
D 3 HOH A 199 1002 308 HOH HOH . 
D 3 HOH A 200 1003 312 HOH HOH . 
D 3 HOH A 201 1004 313 HOH HOH . 
D 3 HOH A 202 1005 314 HOH HOH . 
D 3 HOH A 203 1006 317 HOH HOH . 
D 3 HOH A 204 1007 322 HOH HOH . 
D 3 HOH A 205 1008 332 HOH HOH . 
D 3 HOH A 206 1009 338 HOH HOH . 
D 3 HOH A 207 1010 340 HOH HOH . 
D 3 HOH A 208 1011 341 HOH HOH . 
D 3 HOH A 209 1012 345 HOH HOH . 
D 3 HOH A 210 1013 360 HOH HOH . 
D 3 HOH A 211 1014 375 HOH HOH . 
D 3 HOH A 212 1015 391 HOH HOH . 
D 3 HOH A 213 1016 394 HOH HOH . 
D 3 HOH A 214 1017 398 HOH HOH . 
D 3 HOH A 215 1018 402 HOH HOH . 
D 3 HOH A 216 1019 427 HOH HOH . 
D 3 HOH A 217 1020 442 HOH HOH . 
D 3 HOH A 218 1021 448 HOH HOH . 
D 3 HOH A 219 1022 456 HOH HOH . 
D 3 HOH A 220 1023 457 HOH HOH . 
D 3 HOH A 221 1024 459 HOH HOH . 
D 3 HOH A 222 1025 460 HOH HOH . 
D 3 HOH A 223 1026 465 HOH HOH . 
D 3 HOH A 224 1027 466 HOH HOH . 
D 3 HOH A 225 1028 468 HOH HOH . 
D 3 HOH A 226 1029 469 HOH HOH . 
D 3 HOH A 227 1030 471 HOH HOH . 
D 3 HOH A 228 1031 472 HOH HOH . 
D 3 HOH A 229 1032 475 HOH HOH . 
D 3 HOH A 230 1033 476 HOH HOH . 
D 3 HOH A 231 1034 477 HOH HOH . 
D 3 HOH A 232 1035 478 HOH HOH . 
D 3 HOH A 233 1036 480 HOH HOH . 
D 3 HOH A 234 1037 481 HOH HOH . 
D 3 HOH A 235 1038 482 HOH HOH . 
D 3 HOH A 236 1039 483 HOH HOH . 
D 3 HOH A 237 1040 484 HOH HOH . 
D 3 HOH A 238 1041 485 HOH HOH . 
D 3 HOH A 239 1042 486 HOH HOH . 
D 3 HOH A 240 1043 487 HOH HOH . 
D 3 HOH A 241 1044 488 HOH HOH . 
D 3 HOH A 242 1045 489 HOH HOH . 
D 3 HOH A 243 1046 491 HOH HOH . 
D 3 HOH A 244 1047 492 HOH HOH . 
D 3 HOH A 245 1048 493 HOH HOH . 
D 3 HOH A 246 1049 494 HOH HOH . 
D 3 HOH A 247 1050 495 HOH HOH . 
D 3 HOH A 248 1051 496 HOH HOH . 
D 3 HOH A 249 1052 497 HOH HOH . 
D 3 HOH A 250 1053 498 HOH HOH . 
D 3 HOH A 251 1054 499 HOH HOH . 
D 3 HOH A 252 1055 500 HOH HOH . 
D 3 HOH A 253 1056 501 HOH HOH . 
D 3 HOH A 254 1057 502 HOH HOH . 
D 3 HOH A 255 1058 503 HOH HOH . 
D 3 HOH A 256 1059 504 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 24.932 113.109 74.459 1 67.95 ? C1 GOL 2 A 1 
HETATM 2 O O1 GOL . . . C 2 25.001 112.289 73.316 1 67.77 ? O1 GOL 2 A 1 
HETATM 3 C C2 GOL . . . C 2 24.662 112.197 75.644 1 68.22 ? C2 GOL 2 A 1 
HETATM 4 O O2 GOL . . . C 2 25.483 111.057 75.514 1 66.58 ? O2 GOL 2 A 1 
HETATM 5 C C3 GOL . . . C 2 24.879 112.862 77.009 1 69.46 ? C3 GOL 2 A 1 
HETATM 6 O O3 GOL . . . C 2 24.337 114.168 77.074 1 70.49 ? O3 GOL 2 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           236 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#