data_3GNI
#
_model_server_result.job_id            SZ2Kb88USaVLBDoiYXY_ow 
_model_server_result.datetime_utc      '2024-11-15 16:24:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gni 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":342}' 
#
_entry.id    3GNI 
#
_exptl.entry_id    3GNI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3GNI 
_cell.length_a            73.678 
_cell.length_b            82.874 
_cell.length_c            134.292 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GNI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 119 n n 
C1 O2 CIT sing 120 n n 
C1 C2 CIT sing 121 n n 
O2 HO2 CIT sing 122 n n 
C2 C3 CIT sing 123 n n 
C2 H21 CIT sing 124 n n 
C2 H22 CIT sing 125 n n 
C3 O7 CIT sing 126 n n 
C3 C4 CIT sing 127 n n 
C3 C6 CIT sing 128 n n 
O7 HO7 CIT sing 129 n n 
C4 C5 CIT sing 130 n n 
C4 H41 CIT sing 131 n n 
C4 H42 CIT sing 132 n n 
C5 O3 CIT doub 133 n n 
C5 O4 CIT sing 134 n n 
O4 HO4 CIT sing 135 n n 
C6 O5 CIT doub 136 n n 
C6 O6 CIT sing 137 n n 
O6 HO6 CIT sing 138 n n 
#
_atom_sites.entry_id                     3GNI 
_atom_sites.fract_transf_matrix[1][1]    0.013572 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012066 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007446 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CIT A 1 342 2 CIT CIT . 
D 4 ATP B 1 1 1 ATP ATP . 
E 5 HOH A 1 343 1 HOH HOH . 
E 5 HOH A 2 344 2 HOH HOH . 
E 5 HOH A 3 345 3 HOH HOH . 
E 5 HOH A 4 346 4 HOH HOH . 
E 5 HOH A 5 347 5 HOH HOH . 
E 5 HOH A 6 348 6 HOH HOH . 
E 5 HOH A 7 349 7 HOH HOH . 
E 5 HOH A 8 350 8 HOH HOH . 
E 5 HOH A 9 351 9 HOH HOH . 
E 5 HOH A 10 352 10 HOH HOH . 
E 5 HOH A 11 353 11 HOH HOH . 
E 5 HOH A 12 354 12 HOH HOH . 
E 5 HOH A 13 355 13 HOH HOH . 
E 5 HOH A 14 356 14 HOH HOH . 
E 5 HOH A 15 357 15 HOH HOH . 
E 5 HOH A 16 358 16 HOH HOH . 
E 5 HOH A 17 359 17 HOH HOH . 
E 5 HOH A 18 360 18 HOH HOH . 
E 5 HOH A 19 361 19 HOH HOH . 
E 5 HOH A 20 362 20 HOH HOH . 
E 5 HOH A 21 363 21 HOH HOH . 
E 5 HOH A 22 364 22 HOH HOH . 
E 5 HOH A 23 365 23 HOH HOH . 
E 5 HOH A 24 366 24 HOH HOH . 
E 5 HOH A 25 367 25 HOH HOH . 
E 5 HOH A 26 368 26 HOH HOH . 
E 5 HOH A 27 369 27 HOH HOH . 
E 5 HOH A 28 370 28 HOH HOH . 
E 5 HOH A 29 371 29 HOH HOH . 
E 5 HOH A 30 372 30 HOH HOH . 
E 5 HOH A 31 373 31 HOH HOH . 
E 5 HOH A 32 374 32 HOH HOH . 
E 5 HOH A 33 375 33 HOH HOH . 
E 5 HOH A 34 376 34 HOH HOH . 
E 5 HOH A 35 377 35 HOH HOH . 
E 5 HOH A 36 378 36 HOH HOH . 
E 5 HOH A 37 379 37 HOH HOH . 
E 5 HOH A 38 380 38 HOH HOH . 
E 5 HOH A 39 381 39 HOH HOH . 
E 5 HOH A 40 382 40 HOH HOH . 
E 5 HOH A 41 383 41 HOH HOH . 
E 5 HOH A 42 384 42 HOH HOH . 
E 5 HOH A 43 385 43 HOH HOH . 
E 5 HOH A 44 386 44 HOH HOH . 
E 5 HOH A 45 387 46 HOH HOH . 
E 5 HOH A 46 388 47 HOH HOH . 
E 5 HOH A 47 389 48 HOH HOH . 
E 5 HOH A 48 390 49 HOH HOH . 
E 5 HOH A 49 391 50 HOH HOH . 
E 5 HOH A 50 392 51 HOH HOH . 
E 5 HOH A 51 393 52 HOH HOH . 
E 5 HOH A 52 394 53 HOH HOH . 
E 5 HOH A 53 395 54 HOH HOH . 
E 5 HOH A 54 396 55 HOH HOH . 
E 5 HOH A 55 397 56 HOH HOH . 
E 5 HOH A 56 398 57 HOH HOH . 
E 5 HOH A 57 399 58 HOH HOH . 
E 5 HOH A 58 400 59 HOH HOH . 
E 5 HOH A 59 401 60 HOH HOH . 
E 5 HOH A 60 402 62 HOH HOH . 
E 5 HOH A 61 403 63 HOH HOH . 
E 5 HOH A 62 404 64 HOH HOH . 
E 5 HOH A 63 405 65 HOH HOH . 
E 5 HOH A 64 406 66 HOH HOH . 
E 5 HOH A 65 407 67 HOH HOH . 
E 5 HOH A 66 408 68 HOH HOH . 
E 5 HOH A 67 409 69 HOH HOH . 
E 5 HOH A 68 410 70 HOH HOH . 
E 5 HOH A 69 411 71 HOH HOH . 
E 5 HOH A 70 412 72 HOH HOH . 
E 5 HOH A 71 413 73 HOH HOH . 
E 5 HOH A 72 414 74 HOH HOH . 
E 5 HOH A 73 415 75 HOH HOH . 
E 5 HOH A 74 416 76 HOH HOH . 
E 5 HOH A 75 417 77 HOH HOH . 
E 5 HOH A 76 418 78 HOH HOH . 
E 5 HOH A 77 419 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . C 3 18.431 -15.134 -1.447 1 48.87 ? C1 CIT 342 A 1 
HETATM 2 O O1 CIT . . . C 3 18.886 -16.051 -2.164 1 50.88 ? O1 CIT 342 A 1 
HETATM 3 O O2 CIT . . . C 3 19.095 -14.752 -0.455 1 46.78 ? O2 CIT 342 A 1 
HETATM 4 C C2 CIT . . . C 3 17.093 -14.517 -1.791 1 48.51 ? C2 CIT 342 A 1 
HETATM 5 C C3 CIT . . . C 3 17.18 -13.003 -1.997 1 48.01 ? C3 CIT 342 A 1 
HETATM 6 O O7 CIT . . . C 3 18.163 -12.446 -1.073 1 46.17 ? O7 CIT 342 A 1 
HETATM 7 C C4 CIT . . . C 3 17.572 -12.637 -3.438 1 46.04 ? C4 CIT 342 A 1 
HETATM 8 C C5 CIT . . . C 3 17.665 -11.107 -3.546 1 43.62 ? C5 CIT 342 A 1 
HETATM 9 O O3 CIT . . . C 3 18.635 -10.476 -3.015 1 42.03 ? O3 CIT 342 A 1 
HETATM 10 O O4 CIT . . . C 3 16.763 -10.456 -4.152 1 39.65 ? O4 CIT 342 A 1 
HETATM 11 C C6 CIT . . . C 3 15.806 -12.414 -1.668 1 48.54 ? C6 CIT 342 A 1 
HETATM 12 O O5 CIT . . . C 3 14.813 -12.546 -2.438 1 50.18 ? O5 CIT 342 A 1 
HETATM 13 O O6 CIT . . . C 3 15.671 -11.787 -0.592 1 46.45 ? O6 CIT 342 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           13 
#