data_3GOH # _model_server_result.job_id BoMkvt4QpitAlRTLOGX68g _model_server_result.datetime_utc '2024-10-25 20:26:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3goh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":316}' # _entry.id 3GOH # _exptl.entry_id 3GOH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.29 _cell.angle_gamma 90 _cell.entry_id 3GOH _cell.length_a 98.068 _cell.length_b 52.046 _cell.length_c 68.936 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GOH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 2 A MSE 1 1_555 A N GLU 3 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C LYS 80 A LYS 79 1_555 A N MSE 81 A MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C MSE 81 A MSE 80 1_555 A N LEU 82 A LEU 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C VAL 109 A VAL 108 1_555 A N MSE 110 A MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale5 A C MSE 110 A MSE 109 1_555 A N THR 111 A THR 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale6 A C GLN 160 A GLN 159 1_555 A N MSE 161 A MSE 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale7 A C MSE 161 A MSE 160 1_555 A N LEU 162 A LEU 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 A C LEU 266 A LEU 265 1_555 A N MSE 267 A MSE 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 A C MSE 267 A MSE 266 1_555 A N GLN 268 A GLN 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale10 A C LYS 281 A LYS 280 1_555 A N MSE 282 A MSE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale11 A C MSE 282 A MSE 281 1_555 A N GLU 283 A GLU 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 A C GLN 294 A GLN 293 1_555 A N MSE 295 A MSE 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 A C MSE 295 A MSE 294 1_555 A N ILE 296 A ILE 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 3GOH _atom_sites.fract_transf_matrix[1][1] 0.010197 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000944 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 315 1 GOL GOL . C 2 GOL A 1 316 2 GOL GOL . D 3 HOH A 1 317 3 HOH HOH . D 3 HOH A 2 318 4 HOH HOH . D 3 HOH A 3 319 5 HOH HOH . D 3 HOH A 4 320 6 HOH HOH . D 3 HOH A 5 321 7 HOH HOH . D 3 HOH A 6 322 8 HOH HOH . D 3 HOH A 7 323 9 HOH HOH . D 3 HOH A 8 324 10 HOH HOH . D 3 HOH A 9 325 11 HOH HOH . D 3 HOH A 10 326 12 HOH HOH . D 3 HOH A 11 327 13 HOH HOH . D 3 HOH A 12 328 14 HOH HOH . D 3 HOH A 13 329 15 HOH HOH . D 3 HOH A 14 330 16 HOH HOH . D 3 HOH A 15 331 17 HOH HOH . D 3 HOH A 16 332 18 HOH HOH . D 3 HOH A 17 333 19 HOH HOH . D 3 HOH A 18 334 20 HOH HOH . D 3 HOH A 19 335 21 HOH HOH . D 3 HOH A 20 336 22 HOH HOH . D 3 HOH A 21 337 23 HOH HOH . D 3 HOH A 22 338 24 HOH HOH . D 3 HOH A 23 339 25 HOH HOH . D 3 HOH A 24 340 26 HOH HOH . D 3 HOH A 25 341 27 HOH HOH . D 3 HOH A 26 342 28 HOH HOH . D 3 HOH A 27 343 29 HOH HOH . D 3 HOH A 28 344 30 HOH HOH . D 3 HOH A 29 345 31 HOH HOH . D 3 HOH A 30 346 32 HOH HOH . D 3 HOH A 31 347 33 HOH HOH . D 3 HOH A 32 348 34 HOH HOH . D 3 HOH A 33 349 35 HOH HOH . D 3 HOH A 34 350 36 HOH HOH . D 3 HOH A 35 351 37 HOH HOH . D 3 HOH A 36 352 38 HOH HOH . D 3 HOH A 37 353 39 HOH HOH . D 3 HOH A 38 354 40 HOH HOH . D 3 HOH A 39 355 41 HOH HOH . D 3 HOH A 40 356 42 HOH HOH . D 3 HOH A 41 357 43 HOH HOH . D 3 HOH A 42 358 44 HOH HOH . D 3 HOH A 43 359 45 HOH HOH . D 3 HOH A 44 360 46 HOH HOH . D 3 HOH A 45 361 47 HOH HOH . D 3 HOH A 46 362 48 HOH HOH . D 3 HOH A 47 363 49 HOH HOH . D 3 HOH A 48 364 50 HOH HOH . D 3 HOH A 49 365 51 HOH HOH . D 3 HOH A 50 366 52 HOH HOH . D 3 HOH A 51 367 53 HOH HOH . D 3 HOH A 52 368 54 HOH HOH . D 3 HOH A 53 369 55 HOH HOH . D 3 HOH A 54 370 56 HOH HOH . D 3 HOH A 55 371 57 HOH HOH . D 3 HOH A 56 372 58 HOH HOH . D 3 HOH A 57 373 59 HOH HOH . D 3 HOH A 58 374 60 HOH HOH . D 3 HOH A 59 375 61 HOH HOH . D 3 HOH A 60 376 62 HOH HOH . D 3 HOH A 61 377 63 HOH HOH . D 3 HOH A 62 378 64 HOH HOH . D 3 HOH A 63 379 65 HOH HOH . D 3 HOH A 64 380 66 HOH HOH . D 3 HOH A 65 381 67 HOH HOH . D 3 HOH A 66 382 68 HOH HOH . D 3 HOH A 67 383 69 HOH HOH . D 3 HOH A 68 384 70 HOH HOH . D 3 HOH A 69 385 71 HOH HOH . D 3 HOH A 70 386 72 HOH HOH . D 3 HOH A 71 387 73 HOH HOH . D 3 HOH A 72 388 74 HOH HOH . D 3 HOH A 73 389 75 HOH HOH . D 3 HOH A 74 390 76 HOH HOH . D 3 HOH A 75 391 77 HOH HOH . D 3 HOH A 76 392 78 HOH HOH . D 3 HOH A 77 393 79 HOH HOH . D 3 HOH A 78 394 80 HOH HOH . D 3 HOH A 79 395 81 HOH HOH . D 3 HOH A 80 396 82 HOH HOH . D 3 HOH A 81 397 83 HOH HOH . D 3 HOH A 82 398 84 HOH HOH . D 3 HOH A 83 399 85 HOH HOH . D 3 HOH A 84 400 86 HOH HOH . D 3 HOH A 85 401 87 HOH HOH . D 3 HOH A 86 402 88 HOH HOH . D 3 HOH A 87 403 89 HOH HOH . D 3 HOH A 88 404 90 HOH HOH . D 3 HOH A 89 405 91 HOH HOH . D 3 HOH A 90 406 92 HOH HOH . D 3 HOH A 91 407 93 HOH HOH . D 3 HOH A 92 408 94 HOH HOH . D 3 HOH A 93 409 95 HOH HOH . D 3 HOH A 94 410 96 HOH HOH . D 3 HOH A 95 411 97 HOH HOH . D 3 HOH A 96 412 98 HOH HOH . D 3 HOH A 97 413 99 HOH HOH . D 3 HOH A 98 414 100 HOH HOH . D 3 HOH A 99 415 101 HOH HOH . D 3 HOH A 100 416 102 HOH HOH . D 3 HOH A 101 417 103 HOH HOH . D 3 HOH A 102 418 104 HOH HOH . D 3 HOH A 103 419 105 HOH HOH . D 3 HOH A 104 420 106 HOH HOH . D 3 HOH A 105 421 107 HOH HOH . D 3 HOH A 106 422 108 HOH HOH . D 3 HOH A 107 423 109 HOH HOH . D 3 HOH A 108 424 110 HOH HOH . D 3 HOH A 109 425 111 HOH HOH . D 3 HOH A 110 426 112 HOH HOH . D 3 HOH A 111 427 113 HOH HOH . D 3 HOH A 112 428 114 HOH HOH . D 3 HOH A 113 429 115 HOH HOH . D 3 HOH A 114 430 116 HOH HOH . D 3 HOH A 115 431 117 HOH HOH . D 3 HOH A 116 432 118 HOH HOH . D 3 HOH A 117 433 119 HOH HOH . D 3 HOH A 118 434 120 HOH HOH . D 3 HOH A 119 435 121 HOH HOH . D 3 HOH A 120 436 122 HOH HOH . D 3 HOH A 121 437 123 HOH HOH . D 3 HOH A 122 438 124 HOH HOH . D 3 HOH A 123 439 125 HOH HOH . D 3 HOH A 124 440 126 HOH HOH . D 3 HOH A 125 441 127 HOH HOH . D 3 HOH A 126 442 128 HOH HOH . D 3 HOH A 127 443 129 HOH HOH . D 3 HOH A 128 444 130 HOH HOH . D 3 HOH A 129 445 131 HOH HOH . D 3 HOH A 130 446 132 HOH HOH . D 3 HOH A 131 447 133 HOH HOH . D 3 HOH A 132 448 134 HOH HOH . D 3 HOH A 133 449 135 HOH HOH . D 3 HOH A 134 450 136 HOH HOH . D 3 HOH A 135 451 137 HOH HOH . D 3 HOH A 136 452 138 HOH HOH . D 3 HOH A 137 453 139 HOH HOH . D 3 HOH A 138 454 140 HOH HOH . D 3 HOH A 139 455 141 HOH HOH . D 3 HOH A 140 456 142 HOH HOH . D 3 HOH A 141 457 143 HOH HOH . D 3 HOH A 142 458 144 HOH HOH . D 3 HOH A 143 459 145 HOH HOH . D 3 HOH A 144 460 146 HOH HOH . D 3 HOH A 145 461 147 HOH HOH . D 3 HOH A 146 462 148 HOH HOH . D 3 HOH A 147 463 149 HOH HOH . D 3 HOH A 148 464 150 HOH HOH . D 3 HOH A 149 465 151 HOH HOH . D 3 HOH A 150 466 152 HOH HOH . D 3 HOH A 151 467 153 HOH HOH . D 3 HOH A 152 468 154 HOH HOH . D 3 HOH A 153 469 155 HOH HOH . D 3 HOH A 154 470 156 HOH HOH . D 3 HOH A 155 471 157 HOH HOH . D 3 HOH A 156 472 158 HOH HOH . D 3 HOH A 157 473 159 HOH HOH . D 3 HOH A 158 474 160 HOH HOH . D 3 HOH A 159 475 161 HOH HOH . D 3 HOH A 160 476 162 HOH HOH . D 3 HOH A 161 477 163 HOH HOH . D 3 HOH A 162 478 164 HOH HOH . D 3 HOH A 163 479 165 HOH HOH . D 3 HOH A 164 480 166 HOH HOH . D 3 HOH A 165 481 167 HOH HOH . D 3 HOH A 166 482 168 HOH HOH . D 3 HOH A 167 483 169 HOH HOH . D 3 HOH A 168 484 170 HOH HOH . D 3 HOH A 169 485 171 HOH HOH . D 3 HOH A 170 486 172 HOH HOH . D 3 HOH A 171 487 173 HOH HOH . D 3 HOH A 172 488 174 HOH HOH . D 3 HOH A 173 489 175 HOH HOH . D 3 HOH A 174 490 176 HOH HOH . D 3 HOH A 175 491 177 HOH HOH . D 3 HOH A 176 492 178 HOH HOH . D 3 HOH A 177 493 179 HOH HOH . D 3 HOH A 178 494 180 HOH HOH . D 3 HOH A 179 495 181 HOH HOH . D 3 HOH A 180 496 182 HOH HOH . D 3 HOH A 181 497 183 HOH HOH . D 3 HOH A 182 498 184 HOH HOH . D 3 HOH A 183 499 185 HOH HOH . D 3 HOH A 184 500 186 HOH HOH . D 3 HOH A 185 501 187 HOH HOH . D 3 HOH A 186 502 188 HOH HOH . D 3 HOH A 187 503 189 HOH HOH . D 3 HOH A 188 504 190 HOH HOH . D 3 HOH A 189 505 191 HOH HOH . D 3 HOH A 190 506 192 HOH HOH . D 3 HOH A 191 507 193 HOH HOH . D 3 HOH A 192 508 194 HOH HOH . D 3 HOH A 193 509 195 HOH HOH . D 3 HOH A 194 510 196 HOH HOH . D 3 HOH A 195 511 197 HOH HOH . D 3 HOH A 196 512 198 HOH HOH . D 3 HOH A 197 513 199 HOH HOH . D 3 HOH A 198 514 200 HOH HOH . D 3 HOH A 199 515 201 HOH HOH . D 3 HOH A 200 516 202 HOH HOH . D 3 HOH A 201 517 203 HOH HOH . D 3 HOH A 202 518 204 HOH HOH . D 3 HOH A 203 519 205 HOH HOH . D 3 HOH A 204 520 206 HOH HOH . D 3 HOH A 205 521 207 HOH HOH . D 3 HOH A 206 522 208 HOH HOH . D 3 HOH A 207 523 209 HOH HOH . D 3 HOH A 208 524 210 HOH HOH . D 3 HOH A 209 525 211 HOH HOH . D 3 HOH A 210 526 212 HOH HOH . D 3 HOH A 211 527 213 HOH HOH . D 3 HOH A 212 528 214 HOH HOH . D 3 HOH A 213 529 215 HOH HOH . D 3 HOH A 214 530 216 HOH HOH . D 3 HOH A 215 531 217 HOH HOH . D 3 HOH A 216 532 218 HOH HOH . D 3 HOH A 217 533 219 HOH HOH . D 3 HOH A 218 534 220 HOH HOH . D 3 HOH A 219 535 221 HOH HOH . D 3 HOH A 220 536 222 HOH HOH . D 3 HOH A 221 537 223 HOH HOH . D 3 HOH A 222 538 224 HOH HOH . D 3 HOH A 223 539 225 HOH HOH . D 3 HOH A 224 540 226 HOH HOH . D 3 HOH A 225 541 227 HOH HOH . D 3 HOH A 226 542 228 HOH HOH . D 3 HOH A 227 543 229 HOH HOH . D 3 HOH A 228 544 230 HOH HOH . D 3 HOH A 229 545 231 HOH HOH . D 3 HOH A 230 546 232 HOH HOH . D 3 HOH A 231 547 233 HOH HOH . D 3 HOH A 232 548 234 HOH HOH . D 3 HOH A 233 549 235 HOH HOH . D 3 HOH A 234 550 236 HOH HOH . D 3 HOH A 235 551 237 HOH HOH . D 3 HOH A 236 552 238 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 35.707 0.262 16.903 1 32.52 ? C1 GOL 316 A 1 HETATM 2 O O1 GOL . . . C 2 34.601 0.516 17.758 1 49.04 ? O1 GOL 316 A 1 HETATM 3 C C2 GOL . . . C 2 37.003 0.902 17.369 1 48.74 ? C2 GOL 316 A 1 HETATM 4 O O2 GOL . . . C 2 38.134 0.343 16.691 1 54.04 ? O2 GOL 316 A 1 HETATM 5 C C3 GOL . . . C 2 37.176 0.768 18.876 1 41.46 ? C3 GOL 316 A 1 HETATM 6 O O3 GOL . . . C 2 36.405 -0.23 19.52 1 56.43 ? O3 GOL 316 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #