data_3GOK # _model_server_result.job_id vLNhdYMDeMVC3pj5jT0Ddw _model_server_result.datetime_utc '2024-11-01 03:26:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":1}' # _entry.id 3GOK # _exptl.entry_id 3GOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.378 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GOK _cell.length_a 140.208 _cell.length_b 183.192 _cell.length_c 217.656 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dodecameric 12 software_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 PISA trimeric 3 software_defined_assembly 3 PISA trimeric 3 software_defined_assembly 4 PISA trimeric 3 software_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 ? monomeric 1 author_defined_assembly 9 ? monomeric 1 author_defined_assembly 10 ? monomeric 1 author_defined_assembly 11 ? monomeric 1 author_defined_assembly 12 ? monomeric 1 author_defined_assembly 13 ? monomeric 1 author_defined_assembly 14 ? monomeric 1 author_defined_assembly 15 ? monomeric 1 author_defined_assembly 16 ? monomeric 1 author_defined_assembly 17 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 1 1 A,B,C,M,N,O,Y,Z,AA 2 1 D,E,F,P,Q,R,BA,CA,DA 3 1 G,H,I,S,T,U,EA,FA,GA 4 1 J,K,L,V,W,X,HA,IA,JA 5 1 A,M,Y 6 1 B,N,Z 7 1 C,O,AA 8 1 D,P,BA 9 1 E,Q,CA 10 1 F,R,DA 11 1 G,S,EA 12 1 H,T,FA 13 1 I,U,GA 14 1 J,V,HA 15 1 K,W,IA 16 1 L,X,JA 17 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N # _chem_comp.formula 'C21 H16 N4 O' _chem_comp.formula_weight 340.378 _chem_comp.id P4O _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C20 P4O sing 237 n y C19 C18 P4O doub 238 n y C19 H19 P4O sing 239 n n C20 C25 P4O sing 240 n y C20 C21 P4O doub 241 n y C25 C24 P4O doub 242 n y C25 H25 P4O sing 243 n n C24 C23 P4O sing 244 n y C24 H24 P4O sing 245 n n C23 C22 P4O doub 246 n y C23 H23 P4O sing 247 n n C22 C21 P4O sing 248 n y C22 H22 P4O sing 249 n n C21 N16 P4O sing 250 n y N16 C17 P4O doub 251 n y C17 C18 P4O sing 252 n y C17 H17 P4O sing 253 n n C18 C14 P4O sing 254 n y C14 C13 P4O sing 255 n y C14 N15 P4O doub 256 n y C13 C12 P4O doub 257 n y C13 H13 P4O sing 258 n n N15 C10 P4O sing 259 n y C10 C11 P4O doub 260 n y C10 H10 P4O sing 261 n n C11 C12 P4O sing 262 n y C11 H11 P4O sing 263 n n C12 C2 P4O sing 264 n y C2 C3 P4O doub 265 n y C2 N1 P4O sing 266 n y C3 C4 P4O sing 267 n y C3 H3 P4O sing 268 n n C4 C6 P4O sing 269 n n C4 C5 P4O doub 270 n y C6 O26 P4O doub 271 n n C6 N7 P4O sing 272 n n N7 C8 P4O sing 273 n n N7 H7 P4O sing 274 n n C8 H8C2 P4O sing 275 n n C8 C9 P4O sing 276 n n C8 H8C1 P4O sing 277 n n C9 H9C1 P4O sing 278 n n C9 H9C2 P4O sing 279 n n C9 C5 P4O sing 280 n n C5 N1 P4O sing 281 n y N1 H1 P4O sing 282 n n # _atom_sites.entry_id 3GOK _atom_sites.fract_transf_matrix[1][1] 0.007132 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 P4O A 1 1 1 P4O P4O . N 2 P4O B 1 1 1 P4O P4O . O 2 P4O C 1 1 1 P4O P4O . P 2 P4O D 1 1 1 P4O P4O . Q 2 P4O E 1 1 1 P4O P4O . R 2 P4O F 1 1 1 P4O P4O . S 2 P4O G 1 1 1 P4O P4O . T 2 P4O H 1 1 1 P4O P4O . U 2 P4O I 1 1 1 P4O P4O . V 2 P4O J 1 1 1 P4O P4O . W 2 P4O K 1 1 1 P4O P4O . X 2 P4O L 1 1 1 P4O P4O . Y 3 HOH A 1 365 365 HOH HOH . Y 3 HOH A 2 366 366 HOH HOH . Y 3 HOH A 3 367 367 HOH HOH . Z 3 HOH B 1 365 365 HOH HOH . Z 3 HOH B 2 366 366 HOH HOH . Z 3 HOH B 3 367 367 HOH HOH . Z 3 HOH B 4 368 368 HOH HOH . Z 3 HOH B 5 369 369 HOH HOH . Z 3 HOH B 6 370 370 HOH HOH . Z 3 HOH B 7 371 371 HOH HOH . Z 3 HOH B 8 372 372 HOH HOH . AA 3 HOH C 1 365 365 HOH HOH . AA 3 HOH C 2 366 366 HOH HOH . AA 3 HOH C 3 367 367 HOH HOH . AA 3 HOH C 4 368 368 HOH HOH . AA 3 HOH C 5 369 369 HOH HOH . AA 3 HOH C 6 370 370 HOH HOH . BA 3 HOH D 1 365 365 HOH HOH . BA 3 HOH D 2 366 366 HOH HOH . BA 3 HOH D 3 367 367 HOH HOH . BA 3 HOH D 4 368 368 HOH HOH . BA 3 HOH D 5 369 369 HOH HOH . BA 3 HOH D 6 370 370 HOH HOH . BA 3 HOH D 7 371 371 HOH HOH . BA 3 HOH D 8 372 372 HOH HOH . CA 3 HOH E 1 365 365 HOH HOH . CA 3 HOH E 2 366 366 HOH HOH . CA 3 HOH E 3 367 367 HOH HOH . CA 3 HOH E 4 368 368 HOH HOH . CA 3 HOH E 5 369 369 HOH HOH . DA 3 HOH F 1 365 365 HOH HOH . DA 3 HOH F 2 366 366 HOH HOH . EA 3 HOH G 1 365 365 HOH HOH . EA 3 HOH G 2 366 366 HOH HOH . EA 3 HOH G 3 367 367 HOH HOH . EA 3 HOH G 4 368 368 HOH HOH . EA 3 HOH G 5 369 369 HOH HOH . EA 3 HOH G 6 370 370 HOH HOH . FA 3 HOH H 1 365 365 HOH HOH . FA 3 HOH H 2 366 366 HOH HOH . FA 3 HOH H 3 367 367 HOH HOH . FA 3 HOH H 4 368 368 HOH HOH . FA 3 HOH H 5 369 369 HOH HOH . FA 3 HOH H 6 370 370 HOH HOH . FA 3 HOH H 7 371 371 HOH HOH . GA 3 HOH I 1 365 365 HOH HOH . GA 3 HOH I 2 366 366 HOH HOH . HA 3 HOH J 1 365 365 HOH HOH . HA 3 HOH J 2 366 366 HOH HOH . HA 3 HOH J 3 367 367 HOH HOH . HA 3 HOH J 4 368 368 HOH HOH . HA 3 HOH J 5 369 369 HOH HOH . HA 3 HOH J 6 370 370 HOH HOH . IA 3 HOH K 1 365 365 HOH HOH . IA 3 HOH K 2 366 366 HOH HOH . IA 3 HOH K 3 367 367 HOH HOH . IA 3 HOH K 4 368 368 HOH HOH . JA 3 HOH L 1 365 365 HOH HOH . JA 3 HOH L 2 366 366 HOH HOH . JA 3 HOH L 3 367 367 HOH HOH . JA 3 HOH L 4 368 368 HOH HOH . JA 3 HOH L 5 369 369 HOH HOH . JA 3 HOH L 6 370 370 HOH HOH . JA 3 HOH L 7 371 371 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 P4O . . . T 2 -27.425 -17.327 21.991 1 89.26 ? C19 P4O 1 H 1 HETATM 2 C C20 P4O . . . T 2 -28.774 -17.401 21.683 1 91.69 ? C20 P4O 1 H 1 HETATM 3 C C25 P4O . . . T 2 -29.624 -16.304 21.876 1 92.82 ? C25 P4O 1 H 1 HETATM 4 C C24 P4O . . . T 2 -30.978 -16.418 21.557 1 92.67 ? C24 P4O 1 H 1 HETATM 5 C C23 P4O . . . T 2 -31.478 -17.624 21.048 1 93.18 ? C23 P4O 1 H 1 HETATM 6 C C22 P4O . . . T 2 -30.673 -18.755 20.842 1 92.77 ? C22 P4O 1 H 1 HETATM 7 C C21 P4O . . . T 2 -29.318 -18.687 21.149 1 91.63 ? C21 P4O 1 H 1 HETATM 8 N N16 P4O . . . T 2 -28.502 -19.745 20.966 1 89.73 ? N16 P4O 1 H 1 HETATM 9 C C17 P4O . . . T 2 -27.207 -19.644 21.286 1 88.16 ? C17 P4O 1 H 1 HETATM 10 C C18 P4O . . . T 2 -26.644 -18.457 21.778 1 87.51 ? C18 P4O 1 H 1 HETATM 11 C C14 P4O . . . T 2 -25.2 -18.415 22.161 1 85.51 ? C14 P4O 1 H 1 HETATM 12 C C13 P4O . . . T 2 -24.533 -17.207 22.349 1 82.19 ? C13 P4O 1 H 1 HETATM 13 N N15 P4O . . . T 2 -24.562 -19.598 22.418 1 84.71 ? N15 P4O 1 H 1 HETATM 14 C C10 P4O . . . T 2 -23.275 -19.641 22.807 1 83.66 ? C10 P4O 1 H 1 HETATM 15 C C11 P4O . . . T 2 -22.555 -18.463 22.98 1 82.08 ? C11 P4O 1 H 1 HETATM 16 C C12 P4O . . . T 2 -23.204 -17.253 22.753 1 81.19 ? C12 P4O 1 H 1 HETATM 17 C C2 P4O . . . T 2 -22.479 -15.979 22.894 1 80.37 ? C2 P4O 1 H 1 HETATM 18 C C3 P4O . . . T 2 -21.11 -15.807 23.06 1 79.39 ? C3 P4O 1 H 1 HETATM 19 C C4 P4O . . . T 2 -20.94 -14.441 23.1 1 79.73 ? C4 P4O 1 H 1 HETATM 20 C C6 P4O . . . T 2 -19.741 -13.568 23.262 1 80.32 ? C6 P4O 1 H 1 HETATM 21 O O26 P4O . . . T 2 -18.625 -14.038 23.479 1 80.97 ? O26 P4O 1 H 1 HETATM 22 N N7 P4O . . . T 2 -19.975 -12.253 23.148 1 79.64 ? N7 P4O 1 H 1 HETATM 23 C C8 P4O . . . T 2 -21.22 -11.516 23.414 1 78.68 ? C8 P4O 1 H 1 HETATM 24 C C9 P4O . . . T 2 -22.434 -12.318 22.937 1 79.04 ? C9 P4O 1 H 1 HETATM 25 C C5 P4O . . . T 2 -22.171 -13.814 22.951 1 80.26 ? C5 P4O 1 H 1 HETATM 26 N N1 P4O . . . T 2 -23.098 -14.784 22.82 1 80.87 ? N1 P4O 1 H 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #