data_3GOL # _model_server_result.job_id g4svRg6W1epH8LT2JVzCoQ _model_server_result.datetime_utc '2024-11-08 06:01:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gol # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":580}' # _entry.id 3GOL # _exptl.entry_id 3GOL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GOL _cell.length_a 106.048 _cell.length_b 106.62 _cell.length_c 134.679 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 223 A ASP 220 1_555 D MG MG . A MG 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc2 A O THR 224 A THR 221 1_555 D MG MG . A MG 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc3 D MG MG . A MG 580 1_555 G O HOH . A HOH 645 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc4 D MG MG . A MG 580 1_555 G O HOH . A HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc5 B O THR 224 B THR 221 1_555 F MG MG . B MG 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc6 F MG MG . B MG 580 1_555 H O HOH . B HOH 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GOL _atom_sites.fract_transf_matrix[1][1] 0.00943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009379 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007425 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XND A 1 579 1 XND INX . D 3 MG A 1 580 1 MG MG . E 2 XND B 1 579 2 XND INX . F 3 MG B 1 580 2 MG MG . G 4 HOH A 1 581 1 HOH HOH . G 4 HOH A 2 582 2 HOH HOH . G 4 HOH A 3 583 3 HOH HOH . G 4 HOH A 4 584 4 HOH HOH . G 4 HOH A 5 585 7 HOH HOH . G 4 HOH A 6 586 9 HOH HOH . G 4 HOH A 7 587 10 HOH HOH . G 4 HOH A 8 588 12 HOH HOH . G 4 HOH A 9 589 13 HOH HOH . G 4 HOH A 10 590 14 HOH HOH . G 4 HOH A 11 591 16 HOH HOH . G 4 HOH A 12 592 17 HOH HOH . G 4 HOH A 13 593 18 HOH HOH . G 4 HOH A 14 594 19 HOH HOH . G 4 HOH A 15 595 23 HOH HOH . G 4 HOH A 16 596 24 HOH HOH . G 4 HOH A 17 597 27 HOH HOH . G 4 HOH A 18 598 29 HOH HOH . G 4 HOH A 19 599 31 HOH HOH . G 4 HOH A 20 600 34 HOH HOH . G 4 HOH A 21 601 35 HOH HOH . G 4 HOH A 22 602 36 HOH HOH . G 4 HOH A 23 603 37 HOH HOH . G 4 HOH A 24 604 38 HOH HOH . G 4 HOH A 25 605 40 HOH HOH . G 4 HOH A 26 606 41 HOH HOH . G 4 HOH A 27 607 43 HOH HOH . G 4 HOH A 28 608 44 HOH HOH . G 4 HOH A 29 609 45 HOH HOH . G 4 HOH A 30 610 46 HOH HOH . G 4 HOH A 31 611 48 HOH HOH . G 4 HOH A 32 612 50 HOH HOH . G 4 HOH A 33 613 51 HOH HOH . G 4 HOH A 34 614 54 HOH HOH . G 4 HOH A 35 615 55 HOH HOH . G 4 HOH A 36 616 56 HOH HOH . G 4 HOH A 37 617 59 HOH HOH . G 4 HOH A 38 618 60 HOH HOH . G 4 HOH A 39 619 64 HOH HOH . G 4 HOH A 40 620 67 HOH HOH . G 4 HOH A 41 621 69 HOH HOH . G 4 HOH A 42 622 70 HOH HOH . G 4 HOH A 43 623 71 HOH HOH . G 4 HOH A 44 624 73 HOH HOH . G 4 HOH A 45 625 74 HOH HOH . G 4 HOH A 46 626 76 HOH HOH . G 4 HOH A 47 627 77 HOH HOH . G 4 HOH A 48 628 78 HOH HOH . G 4 HOH A 49 629 83 HOH HOH . G 4 HOH A 50 630 84 HOH HOH . G 4 HOH A 51 631 85 HOH HOH . G 4 HOH A 52 632 86 HOH HOH . G 4 HOH A 53 633 87 HOH HOH . G 4 HOH A 54 634 88 HOH HOH . G 4 HOH A 55 635 90 HOH HOH . G 4 HOH A 56 636 93 HOH HOH . G 4 HOH A 57 637 94 HOH HOH . G 4 HOH A 58 638 95 HOH HOH . G 4 HOH A 59 639 96 HOH HOH . G 4 HOH A 60 640 97 HOH HOH . G 4 HOH A 61 641 98 HOH HOH . G 4 HOH A 62 642 99 HOH HOH . G 4 HOH A 63 643 100 HOH HOH . G 4 HOH A 64 644 101 HOH HOH . G 4 HOH A 65 645 102 HOH HOH . G 4 HOH A 66 646 103 HOH HOH . G 4 HOH A 67 647 104 HOH HOH . G 4 HOH A 68 648 105 HOH HOH . G 4 HOH A 69 649 106 HOH HOH . G 4 HOH A 70 650 110 HOH HOH . G 4 HOH A 71 651 111 HOH HOH . G 4 HOH A 72 652 112 HOH HOH . H 4 HOH B 1 581 5 HOH HOH . H 4 HOH B 2 582 6 HOH HOH . H 4 HOH B 3 583 8 HOH HOH . H 4 HOH B 4 584 11 HOH HOH . H 4 HOH B 5 585 15 HOH HOH . H 4 HOH B 6 586 20 HOH HOH . H 4 HOH B 7 587 21 HOH HOH . H 4 HOH B 8 588 22 HOH HOH . H 4 HOH B 9 589 25 HOH HOH . H 4 HOH B 10 590 26 HOH HOH . H 4 HOH B 11 591 28 HOH HOH . H 4 HOH B 12 592 30 HOH HOH . H 4 HOH B 13 593 32 HOH HOH . H 4 HOH B 14 594 33 HOH HOH . H 4 HOH B 15 595 39 HOH HOH . H 4 HOH B 16 596 42 HOH HOH . H 4 HOH B 17 597 47 HOH HOH . H 4 HOH B 18 598 49 HOH HOH . H 4 HOH B 19 599 52 HOH HOH . H 4 HOH B 20 600 53 HOH HOH . H 4 HOH B 21 601 57 HOH HOH . H 4 HOH B 22 602 58 HOH HOH . H 4 HOH B 23 603 61 HOH HOH . H 4 HOH B 24 604 62 HOH HOH . H 4 HOH B 25 605 63 HOH HOH . H 4 HOH B 26 606 65 HOH HOH . H 4 HOH B 27 607 66 HOH HOH . H 4 HOH B 28 608 68 HOH HOH . H 4 HOH B 29 609 72 HOH HOH . H 4 HOH B 30 610 75 HOH HOH . H 4 HOH B 31 611 79 HOH HOH . H 4 HOH B 32 612 80 HOH HOH . H 4 HOH B 33 613 81 HOH HOH . H 4 HOH B 34 614 82 HOH HOH . H 4 HOH B 35 615 89 HOH HOH . H 4 HOH B 36 616 91 HOH HOH . H 4 HOH B 37 617 92 HOH HOH . H 4 HOH B 38 618 107 HOH HOH . H 4 HOH B 39 619 108 HOH HOH . H 4 HOH B 40 620 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.451 _atom_site.Cartn_y 55.992 _atom_site.Cartn_z 59.054 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 580 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 372 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #